Capillary electrophoresis and 5-channel LIF detection of a 26plex autosomal STR assay for human identification.

Multiplex polymerase chain reaction (PCR) is a common method used for DNA typing in forensic and paternity cases. There are numerous commercial short tandem repeat (STR) multiplex assays currently available to the forensic community. These assays amplify the core Combined DNA Index System (CODIS) STR loci for entry into the US. DNA database. Additional non-CODIS loci, which are considered genetically unlinked to the CODIS loci, can be useful in resolving challenging cases such as missing persons and mass disaster victim identification, paternity testing, and immigration testing. An STR multiplex has been successfully developed with 25 non-CODIS autosomal loci plus the sex-typing locus amelogenin for a total of 26 loci in a single 26plex amplification reaction. This chapter will focus on the preparation and the use of the 26plex assay with DNA samples for the purpose of human identification.

[1]  D. Gjertson,et al.  The specific power of parentage exclusion in a child's blood relatives , 2005, Transfusion.

[2]  John M. Butler,et al.  Genetics and Genomics of Core STR Loci Used in Human Identity Testing , 2006 .

[3]  J. Carpten,et al.  Modulation of non-templated nucleotide addition by Taq DNA polymerase: primer modifications that facilitate genotyping. , 1996, BioTechniques.

[4]  Michael D Coble,et al.  Characterization of new miniSTR loci to aid analysis of degraded DNA. , 2005, Journal of forensic sciences.

[5]  J. Butler,et al.  A 26plex Autosomal STR Assay to Aid Human Identity Testing * † , 2009, Journal of forensic sciences.

[6]  J. Butler,et al.  Genetics and Genomics of Core Short Tandem Repeat Loci Used in Human Identity Testing , 2006, Journal of forensic sciences.

[7]  F. Chiafari,et al.  Better tools are needed for parentage and kinship studies , 2003, Transfusion.

[8]  J. Butler,et al.  Evaluating the Effect of Additional Forensic Loci on Likelihood Ratio Values for Complex Kinship Analysis , 2010 .

[9]  R. Wenk Incest indices from microsatellite genotypes of mother‐child pairs , 2007, Transfusion.

[10]  H. Haas-Rochholz,et al.  Additional primer sets for an amelogenin gene PCR-based DNA-sex test , 1997, International Journal of Legal Medicine.

[11]  Yin Shen,et al.  The development of reduced size STR amplicons as tools for analysis of degraded DNA. , 2003, Journal of forensic sciences.

[12]  J. Butler Constructing STR multiplex assays. , 2005, Methods in molecular biology.

[13]  Michael D Coble,et al.  Characterization of 26 MiniSTR Loci for Improved Analysis of Degraded DNA Samples , 2007, Journal of forensic sciences.