Fourier Properties of Symmetric-Geometry Computed Tomography and Its Linogram Reconstruction With Neural Network

In this work, we investigate the Fourier properties of a symmetric-geometry computed tomography (SGCT) with linearly distributed source and detector in a stationary configuration. A linkage between the 1D Fourier Transform of a weighted projection from SGCT and the 2D Fourier Transform of a deformed object is established in a simple mathematical form (i.e., the Fourier slice theorem for SGCT). Based on its Fourier slice theorem and its unique data sampling in the Fourier space, a Linogram-based Fourier reconstruction method is derived for SGCT. We demonstrate that the entire Linogram reconstruction process can be embedded as known operators into an end-to-end neural network. As a learning-based approach, the proposed Linogram-Net has capability of improving CT image quality for non-ideal imaging scenarios, a limited-angle SGCT for instance, through combining weights learning in the projection domain and loss minimization in the image domain. Numerical simulations and physical experiments on an SGCT prototype platform showed that our proposed Linogram-based method can achieve accurate reconstruction from a dual-SGCT scan and can greatly reduce computational complexity when compared with the filtered backprojection type reconstruction. The Linogram-Net achieved accurate reconstruction when projection data are complete and significantly suppressed image artifacts from a limited-angle SGCT scan mimicked by using a clinical CT dataset, with the average CT number error in the selected regions of interest reduced from 67.7 Hounsfield Units (HU) to 28.7 HU, and the average normalized mean square error of overall images reduced from 4.21e-3 to 2.65e-3.

[1]  Taly Gilat Schmidt,et al.  A prototype table‐top inverse‐geometry volumetric CT system , 2006 .

[2]  Xiaochuan Pan,et al.  Theory and algorithms for image reconstruction on chords and within regions of interest. , 2005, Journal of the Optical Society of America. A, Optics, image science, and vision.

[3]  Li Zhang,et al.  Direct filtered-backprojection-type reconstruction from a straight-line trajectory , 2007 .

[4]  J. D. O'Sullivan,et al.  A Fast Sinc Function Gridding Algorithm for Fourier Inversion in Computer Tomography , 1985, IEEE Transactions on Medical Imaging.

[5]  Li Zhang,et al.  An Improved Form of Linogram Algorithm for Image Reconstruction , 2008, IEEE Transactions on Nuclear Science.

[6]  G. Herman,et al.  Linograms in Image Reconstruction from Projections , 1987, IEEE Transactions on Medical Imaging.

[7]  Feng Lin,et al.  Low-Dose CT With a Residual Encoder-Decoder Convolutional Neural Network , 2017, IEEE Transactions on Medical Imaging.

[8]  Quanzheng Li,et al.  Iterative Low-Dose CT Reconstruction With Priors Trained by Artificial Neural Network , 2017, IEEE Transactions on Medical Imaging.

[9]  N. Pelc,et al.  An inverse-geometry volumetric CT system with a large-area scanned source: a feasibility study. , 2004, Medical physics.

[10]  Henry Stark,et al.  Direct Fourier Reconstruction in Fan-Beam Tomography , 1987, IEEE Transactions on Medical Imaging.

[11]  C. Michel,et al.  Fast PET EM reconstruction from linograms , 2002, 2002 IEEE Nuclear Science Symposium Conference Record.

[12]  Bruno De Man,et al.  A multi-source inverse-geometry CT system: initial results with an 8 spot x-ray source array. , 2014, Physics in medicine and biology.

[13]  Dwight G. Nishimura,et al.  Rapid gridding reconstruction with a minimal oversampling ratio , 2005, IEEE Transactions on Medical Imaging.

[14]  Ke Li,et al.  Learning to Reconstruct Computed Tomography Images Directly From Sinogram Data Under A Variety of Data Acquisition Conditions , 2019, IEEE Transactions on Medical Imaging.

[15]  A. Kak,et al.  A computational study of reconstruction algorithms for diffraction tomography: Interpolation versus filtered-backpropagation , 1983 .

[16]  Andreas K. Maier,et al.  Learning with Known Operators reduces Maximum Training Error Bounds , 2019, Nature Machine Intelligence.

[17]  G. Herman,et al.  Image reconstruction from linograms: implementation and evaluation. , 1988, IEEE transactions on medical imaging.

[18]  Yuxiang Xing,et al.  Stationary Computed Tomography with Source and Detector in Linear Symmetric-Geometry: Direct Filtered-Backprojection Reconstruction. , 2020, Medical physics.

[19]  H. Halling,et al.  A new Fourier method for fan beam reconstruction , 1995, 1995 IEEE Nuclear Science Symposium and Medical Imaging Conference Record.

[20]  Otmar Scherzer,et al.  A Reconstruction Algorithm for Photoacoustic Imaging Based on the Nonuniform FFT , 2009, IEEE Transactions on Medical Imaging.

[21]  Paul R. Edholm The Linogram Algorithm and Direct Fourier Method with Linograms , 1991 .

[22]  R. Hingorani,et al.  An Investigation of Computerized Tomography by Direct Fourier Inversion and Optimum Interpolation , 1981, IEEE Transactions on Biomedical Engineering.

[23]  Ronald M. Summers,et al.  DeepOrgan: Multi-level Deep Convolutional Networks for Automated Pancreas Segmentation , 2015, MICCAI.

[24]  Andreas K. Maier,et al.  PYRO-NN: Python Reconstruction Operators in Neural Networks , 2019, Medical physics.

[25]  Stephen M. Moore,et al.  The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository , 2013, Journal of Digital Imaging.

[26]  Gabriele Steidl,et al.  A new linogram algorithm for computerized tomography , 2001 .

[27]  Ren Ng Fourier slice photography , 2005, ACM Trans. Graph..

[28]  C. Axelsson,et al.  Direct Fourier methods for 3D tomography reconstruction , 1992, IEEE Conference on Nuclear Science Symposium and Medical Imaging.

[29]  Paul R. Edholm,et al.  Novel Properties Of The Fourier Decomposition Of The Sinogram , 1986, Other Conferences.

[30]  Jong Chul Ye,et al.  Framing U-Net via Deep Convolutional Framelets: Application to Sparse-View CT , 2017, IEEE Transactions on Medical Imaging.

[31]  R. Hingorani,et al.  Direct Fourier reconstruction in computer tomography , 1981 .

[32]  C R Floyd,et al.  An artificial neural network for SPECT image reconstruction. , 1991, IEEE transactions on medical imaging.

[33]  Leslie Greengard,et al.  Accelerating the Nonuniform Fast Fourier Transform , 2004, SIAM Rev..

[34]  Yuan Cheng,et al.  Rectangular computed tomography using a stationary array of CNT emitters: initial experimental results , 2013, Medical Imaging.

[35]  R. Bracewell Strip Integration in Radio Astronomy , 1956 .

[36]  Kees Joost Batenburg,et al.  Fast Tomographic Reconstruction From Limited Data Using Artificial Neural Networks , 2013, IEEE Transactions on Image Processing.

[37]  Xiaochuan Pan,et al.  Volume image reconstruction from a straight-line source trajectory , 2005, IEEE Nuclear Science Symposium Conference Record, 2005.

[38]  Yong Guan,et al.  Limited angle tomography for transmission X-ray microscopy using deep learning , 2020, Journal of synchrotron radiation.

[39]  Claude Comtat,et al.  Fast fully 3D image reconstruction using planograms , 2000, 2000 IEEE Nuclear Science Symposium. Conference Record (Cat. No.00CH37149).

[40]  Mathias Unberath,et al.  Deep Learning Computed Tomography: Learning Projection-Domain Weights From Image Domain in Limited Angle Problems , 2018, IEEE Transactions on Medical Imaging.

[41]  Maria Magnusson,et al.  The linogram method for image reconstruction from projections applied to fan-beam projection data , 1992, IEEE Conference on Nuclear Science Symposium and Medical Imaging.

[42]  Norbert J Pelc,et al.  Fourier properties of the fan-beam sinogram. , 2010, Medical physics.

[43]  Uwe Kruger,et al.  Competitive performance of a modularized deep neural network compared to commercial algorithms for low-dose CT image reconstruction , 2019, Nat. Mach. Intell..