The Growth of Phylogenetic Information and the Need for a Phylogenetic Data Base

In the wake of widespread acceptance of phylogenetic methods, it is appropriate to assess how fast phylogenetic knowledge is accumulating. To obtain a rough indica? tion of this rate, we surveyed phylogenetic analyses in the recent literature. The re? sults raise an important information man? agement issue. The volume of phyloge? netic information now becoming available may soon compel the systematics com? munity to confront its own rapidly ex? panding knowledge base in a deliberate and concerted manner. In this note, we present quantitative evidence regarding the growth rate of phylogenetic informa? tion and then argue for the establishment of an electronic data base of phylogenetic data and results.

[1]  A. Kluge A Concern for Evidence and a Phylogenetic Hypothesis of Relationships among Epicrates (Boidae, Serpentes) , 1989 .

[2]  D Benton,et al.  GenBank: current status and future directions , 1990 .

[3]  Lynn Margulis,et al.  Five Kingdoms: An Illustrated Guide to the Phyla of Life on Earth , 1982 .

[4]  J. Felsenstein Evolutionary trees from DNA sequences: A maximum likelihood approach , 2005, Journal of Molecular Evolution.

[5]  M. Sanderson REVERSIBILITY IN EVOLUTION: A MAXIMUM LIKELIHOOD APPROACH TO CHARACTER GAIN/LOSS BIAS IN PHYLOGENIES , 1993, Evolution; international journal of organic evolution.

[6]  C Burks,et al.  Electronic data publishing and GenBank. , 1991, Science.

[7]  Roderic D. M. Page,et al.  QUANTITATIVE CLADISTIC BIOGEOGRAPHY: CONSTRUCTING AND COMPARING AREA CLADOGRAMS , 1988 .

[8]  M. Donoghue,et al.  PATTERNS OF VARIATION IN LEVELS OF HOMOPLASY , 1989, Evolution; international journal of organic evolution.

[9]  Arthur Cronquist,et al.  Angiosperm Orders and Families. (Book Reviews: An Integrated System of Classification of Flowering Plants) , 1982 .

[10]  Norman I. Platnick,et al.  AN EMPIRICAL COMPARISON OF MICROCOMPUTER PARSIMONY PROGRAMS , 1987 .

[11]  M. Sanderson IN SEARCH OF HOMOPLASTIC TENDENCIES: STATISTICAL INFERENCE OF TOPOLOGICAL PATTERNS IN HOMOPLASY , 1991, Evolution; international journal of organic evolution.

[12]  A. Queiroz,et al.  THE USEFULNESS OF BEHAVIOR FOR PHYLOGENY ESTIMATION: LEVELS OF HOMOPLASY IN BEHAVIORAL AND MORPHOLOGICAL CHARACTERS , 1993, Evolution; international journal of organic evolution.

[13]  N. Saitou,et al.  The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.

[14]  A. D. Gordon,et al.  Obtaining common pruned trees , 1985 .

[15]  James W. Archie,et al.  A randomization test for phylogenetic information in systematic data , 1989 .

[16]  J. Doyle,et al.  Gene Trees and Species Trees: Molecular Systematics as One-Character Taxonomy , 1992 .

[17]  Gareth Nelson,et al.  Systematics and Biogeography: Cladistics and Vicariance , 1981 .

[18]  M. Donoghue,et al.  PHYLOGENIES AND THE ANALYSIS OF EVOLUTIONARY SEQUENCES, WITH EXAMPLES FROM SEED PLANTS , 1989, Evolution; international journal of organic evolution.

[19]  D. Brooks,et al.  MACROEVOLUTIONARY PATTERNS OF MORPHOLOGICAL DIVERSIFICATION AMONG PARASITIC FLATWORMS (PLATYHELMINTHES: CERCOMERIA) , 1993, Evolution; international journal of organic evolution.