The biology of methanogenic bacteria

INTRODUCTION .............................................................. METHODS FOR STUDY ...................................................... Isolation and Cultivation Techniques ......................................... Gas Chromatographic Analysis ............................................... GENERAL PROPERTIES ................................................... Species Characteristics .................................................... Selective Enrichment of Genera .............................................. Morphological Variation ..................................................... Fine Structure.............................................................. Coccus-type cells ......................................................... Sarcina-type cells .......................................................... Rod-type cells ............................................................. Spirillum-type cells ........................................................ Taxonomy ................................................................... PHYSIOLOGICAL ASPECTS................................................. Intermediary Metabolism .................................................... Unique biochemical components ............................................ Methane synthesis............; Nature of Autotrophic Growth in Methanobacterium thermoautotrophicum ...... ECOLOGICAL ASPECTS .................................................... Activities in Nature .......................................................... Microbial Interactions ....................................................... ACKNOWLEDGEMENTS ...................................................... LITERATURE CITED.........................................................

[1]  M. J. Pine,et al.  Studies on the methane fermentation. XII. The pathway of hydrogen in the acetate fermentation. , 1956, Journal of Bacteriology.

[2]  G. Cohen-bazire,et al.  THE FINE STRUCTURE OF RHODOSPIRILLUM RUBRUM , 1963, The Journal of cell biology.

[3]  J. Zeikus,et al.  Comparative ultrastructure of methanogenic bacteria. , 1975, Canadian journal of microbiology.

[4]  D D Wagman,et al.  Selected values of chemical thermodynamic properties , 1952 .

[5]  R S Wolfe,et al.  New approach to the cultivation of methanogenic bacteria: 2-mercaptoethanesulfonic acid (HS-CoM)-dependent growth of Methanobacterium ruminantium in a pressureized atmosphere , 1976, Applied and environmental microbiology.

[6]  U. Colombo Non-marine organic geochemistry , 1972 .

[7]  R. E. Hungate,et al.  The Rumen and Its Microbes , 2013 .

[8]  D. Keeney,et al.  Methane Formation by Lake Sediments during in Vitro Incubation , 1973 .

[9]  T. Stadtman,et al.  STUDIES ON THE METHANE FERMENTATION IX , 1951, Journal of bacteriology.

[10]  M. P. Bryant Interactions among intestinal microorganisms. , 1972, American Journal of Clinical Nutrition.

[11]  D S Clark,et al.  Factors affecting rate of methane formation from acetic acid by enriched methanogenic cultures. , 1976, Canadian journal of microbiology.

[12]  J. Zeikus,et al.  Fermentation of cellulose and cellobiose by 'Clostridium thermocellum' in the absence and presence of 'Methanobacterium thermoautotrophicum'. (Thermophilic cellulose fermentation) , 1975 .

[13]  R. Wolfe,et al.  Structure and methylation of coenzyme M(HSCH2CH2SO3). , 1974, The Journal of biological chemistry.

[14]  G. Shockman,et al.  Model for Cell Wall Growth of Streptococcus faecalis , 1970, Journal of bacteriology.

[15]  M. P. Bryant,et al.  Factor 420-dependent tyridine nucleotide-linked hydrogenase system of Methanobacterium ruminantium , 1975, Journal of bacteriology.

[16]  R. E. Hungate,et al.  Experiments on the methane bacteria in sludge. , 1954, Canadian journal of microbiology.

[17]  L. Daniels,et al.  Improved culture flask for obligate anaerobes. , 1975, Applied microbiology.

[18]  M. P. Bryant,et al.  Hydrogen-oxidizing Methane Bacteria I. Cultivation and Methanogenesis , 1968, Journal of bacteriology.

[19]  M. Winfrey,et al.  Temperature limitation of methanogenesis in aquatic sediments , 1976, Applied and environmental microbiology.

[20]  J. R. Quayle The Metabolism of One-Carbon Compounds by Micro-Organisms , 1972 .

[21]  M. Wolin,et al.  H2 production by Selenomonas ruminantium in the absence and presence of methanogenic bacteria. , 1975, Applied microbiology.

[22]  M. P. Bryant,et al.  Commentary on the Hungate technique for culture of anaerobic bacteria. , 1972, The American journal of clinical nutrition.

[23]  B. Blaylock Cobamide-dependent methanol-cyanocob(I)alamin methyltransferase of Methanosarcina barkeri. , 1968, Archives of biochemistry and biophysics.

[24]  M. J. Pine,et al.  THE METHANE FERMENTATIONS OF ACETATE AND METHANOL , 1957, Journal of Bacteriology.

[25]  P. N. Hobson,et al.  Anaerobic digestion of organic matter , 1974 .

[26]  R. Murray ON THE CELL WALL STRUCTURE OF SPIRILLUM SERPENS , 1963 .

[27]  M. P. Bryant,et al.  Ferredoxin-Dependent Conversion of Acetaldehyde to Acetate and H2 in Extracts of S Organism , 1972, Journal of bacteriology.

[28]  M. P. Bryant,et al.  Coenzyme M, Essential for Growth of a Rumen Strain of Methanobacterium ruminantium , 1974, Journal of bacteriology.

[29]  R. Sykes,et al.  Anaerobic digestion in biological waste treatment. , 1971, Progress in Industrial Microbiology.

[30]  R S Wolfe,et al.  Microbial formation of methane. , 1971, Advances in microbial physiology.

[31]  M. P. Bryant,et al.  Factor 420-dependent pyridine nucleotide-linked formate metabolism of Methanobacterium ruminantium , 1975, Journal of bacteriology.

[32]  T. Cappenberg Interrelations between sulfate-reducing and methane-producing bacteria in bottom deposits of a fresh-water lake : academisch proefschrift , 1975 .

[33]  J. Zeikus,et al.  Fine Structure of Methanobacterium thermoautotrophicum: Effect of Growth Temperature on Morphology and Ultrastructure , 1973, Journal of bacteriology.

[34]  R. E. Hungate,et al.  The Roll-Tube Method for Cultivation of Strict Anaerobes , 1972 .

[35]  T. Stadtman,et al.  Methane biosynthesis by Methanosarcina barkeri. Properties of the soluble enzyme system. , 1966, Archives of biochemistry and biophysics.

[36]  M. P. Bryant,et al.  Glucose Fermentation Products of Ruminococcus albus Grown in Continuous Culture with Vibrio succinogenes: Changes Caused by Interspecies Transfer of H2 , 1973, Journal of bacteriology.

[37]  G. Kalmanson,et al.  Cores, Microbial Organelles Possibly Specific to Group D Streptococci , 1968, Journal of bacteriology.

[38]  H. A. Barker Corrinoid-dependent enzymic reactions. , 1972, Annual Review of Biochemistry.

[39]  George E. Claypool,et al.  The Origin and Distribution of Methane in Marine Sediments , 1974 .

[40]  R. Wolfe,et al.  FORMATION OF METHANE BY BACTERIAL EXTRACTS. , 1963, The Journal of biological chemistry.

[41]  T. Zhilina [Fine structure of methanosarcina]. , 1971, Микробиология.

[42]  T. Stadtman,et al.  Studies on the methane fermentation. X. A new formate-decomposing bacterium, Methanococcus vannielii. , 1951, Journal of bacteriology.

[43]  J. Zeikus,et al.  Microbial Decomposition of Synthetic 14C-Labeled Lignins in Nature: Lignin Biodegradation in a Variety of Natural Materials , 1977, Applied and environmental microbiology.

[44]  A. Buswell,et al.  Biological formation of methane , 1956 .

[45]  M. Winfrey,et al.  Association of hydrogen metabolism with methanogenesis in Lake Mendota sediments , 1977, Applied and environmental microbiology.

[46]  M. Winfrey,et al.  Effect of sulfate on carbon and electron flow during microbial methanogenesis in freshwater sediments , 1977, Applied and environmental microbiology.

[47]  R. Wolfe,et al.  Biochemistry of methane formation , 1971 .

[48]  M. P. Bryant,et al.  Hydrogen-oxidizing Methane Bacteria II. Electron Microscopy , 1968, Journal of bacteriology.

[49]  J. R. Quayle,et al.  The autotrophic growth of Micrococcus denitrificans on Methanol. , 1975, Biochemical Journal.

[50]  P. Cheeseman,et al.  Isolation and Properties of a Fluorescent Compound, Factor420, from Methanobacterium Strain M.o.H , 1972, Journal of bacteriology.

[51]  S. Holt,et al.  Fine Structure of Sarcina maxima and Sarcina ventriculi , 1967, Journal of Bacteriology.

[52]  J. Zeikus,et al.  Rapid method for the radioisotopic analysis of gaseous end products of anaerobic metabolism. , 1974, Applied microbiology.

[53]  J. Zeikus,et al.  Fine structure of Methanospirillum hungatii , 1975, Journal of bacteriology.

[54]  A. J. Kluyver,et al.  On the fermentation of carbon monoxide by pure cultures of methane bacteria. , 1947, Archives of biochemistry.

[55]  C. Stadtman,et al.  STUDIES ON THE METHANE FERMENTATION , 2022 .

[56]  P. Dugan,et al.  Tentative Identification of Methanogenic Bacteria by Fluorescence Microscopy , 1977, Applied and environmental microbiology.

[57]  W. Pretorius The effect of formate on the growth of acetate utilizing methanogenic bacteria , 1972 .

[58]  T C Stadtman,et al.  Methane fermentation. , 1967, Annual Review of Microbiology.

[59]  R. Lewin SAPROSPIRA GRANDIS GROSS; AND SUGGESTIONS FOR RECLASSIFYING HELICAL, APOCHLOROTIC, GLIDING ORGANISMS , 1962 .

[60]  G. Harvey,et al.  Methane in Lake Kivu: New Data Bearing on Its Origin , 1973, Science.

[61]  M. P. Bryant,et al.  Characteristics of S Organism Isolated from Methanobacillus omelianskii , 1972, Journal of bacteriology.

[62]  J. Ferry,et al.  Methanospirillum, a New Genus of Methanogenic Bacteria, and Characterization of Methanospirillum hungatii sp.nov. , 1974 .

[63]  R. E. Brown,et al.  In vivo studies of methanogenesis in the bovine rumen: dissimilation of acetate. , 1961, Journal of general microbiology.

[64]  L. A. Roth,et al.  Characterization of a strain of Methanospirillum hungatti. , 1976, Canadian journal of microbiology.

[65]  R. Thauer,et al.  Energy production in anaerobic organisms. , 1970, Angewandte Chemie.

[66]  G. S. Parks,et al.  Selected values of chemical thermodynamic properties , 1953 .

[67]  P. Mccarty,et al.  Thermodynamics of biological synthesis and growth. , 1965, Air and water pollution.

[68]  K. Chung Inhibitory effects of H2 on growth of Clostridium cellobioparum , 1976, Applied and environmental microbiology.

[69]  W. Payne,et al.  Inhibition of methanogenesis in salt marsh sediments and whole-cell suspensions of methanogenic bacteria by nitrogen oxides , 1976, Applied and environmental microbiology.

[70]  J. Bollag,et al.  Inhibition of methane formation in soil by various nitrogen-containing compounds , 1973 .

[71]  R. E. Hungate,et al.  Use of syringe methods for anaerobiosis. , 1972, The American journal of clinical nutrition.

[72]  R. E. Hungate,et al.  Formate as an Intermediate in the Bovine Rumen Fermentation , 1970, Journal of bacteriology.

[73]  J. Waterbury,et al.  Fine Structure of Ectothiorhodospira mobilis Pelsh , 1968, Journal of bacteriology.

[74]  I. Robinson,et al.  Isoleucine Biosynthesis from 2-Methylbutyric Acid by Anaerobic Bacteria from the Rumen , 1969, Journal of bacteriology.

[75]  M. Wolin Metabolic interactions among intestinal microorganisms. , 1974, The American journal of clinical nutrition.

[76]  B. Musgrave,et al.  Gas chromatographic measurements of hydrothermal emanations at Yellowstone National Park , 1966 .

[77]  M. P. Bryant,et al.  Ferredoxin- and Nicotinamide Adenine Dinucleotide-Dependent H2 Production from Ethanol and Formate in Extracts of S Organism Isolated from “Methanobacillus omelianskii” , 1972, Journal of bacteriology.

[78]  C. J. Chamberlain The Cell Wall , 1907, Botanical Gazette.

[79]  R. Wolfe,et al.  A simplified assay for coenzyme M (HSCH2CH2SO3). Resolution of methylcobalamin-coenzyme M methyltransferase and use of sodium borohydride. , 1974, The Journal of biological chemistry.

[80]  J. C. Ward,et al.  Methane Formation in Living Trees: A Microbial Origin , 1974, Science.

[81]  N. I. Aleksandrushkina,et al.  [Taxonomy of Methanosarcina]. , 1974, Микробиология.

[82]  R. E. Hungate,et al.  Characterization of Methanobacterium mobilis, sp. n., Isolated from the Bovine Rumen , 1968, Journal of bacteriology.

[83]  E. Ishiguro,et al.  Control of Morphogenesis in Geodermatophilus: Ultrastructural Studies , 1970, Journal of bacteriology.

[84]  James T. Staley,et al.  Bergey's Manual of Determinative Bacteriology , 1939 .

[85]  R. Wolfe,et al.  A new coenzyme of methyl transfer, coenzyme M. , 1971, Biochemistry.

[86]  J. Zeikus,et al.  Methanobacterium thermoautotrophicus sp. n., an Anaerobic, Autotrophic, Extreme Thermophile , 1972, Journal of bacteriology.

[87]  R. Oremland Methane production in shallow-water, tropical marine sediments. , 1975, Applied microbiology.

[88]  J. Rudd,et al.  Measurement of microbial oxidation of methane in lake water , 1974 .

[89]  B. McBride,et al.  New method for the isolation and identification of methanogenic bacteria. , 1975, Applied microbiology.

[90]  S. T. Cowan Bergey's Manual of Determinative Bacteriology , 1948, Nature.

[91]  T. Miller,et al.  Formation of Hydrogen and Formate by Ruminococcus albus , 1974, Journal of bacteriology.

[92]  Robert A. Berner,et al.  Methane Production in the Interstitial Waters of Sulfate-Depleted Marine Sediments , 1974, Science.