DNA repair and the role of chromatin structure.

Abstract The demonstration of variable repair efficiency at specific sites in a yeast minichromosome and the lack of gene-specific repair in a human neurodegenerative disorder were among the highlights in 1990, when many reports emphasized the significant role of chromatin structure in both DNA damage formation and its subsequent repair.

[1]  J. M. Gale,et al.  UV INDUCED (6‐4) PHOTOPRODUCTS ARE DISTRIBUTED DIFFERENTLY THAN CYCLOBUTANE DIMERS IN NUCLEOSOMES , 1990, Photochemistry and photobiology.

[2]  J. M. Gale,et al.  Photofootprint of nucleosome core DNA in intact chromatin having different structural states. , 1988, Journal of molecular biology.

[3]  M. Smerdon,et al.  DNA repair within nucleosome cores of UV-irradiated human cells. , 1990, Biochemistry.

[4]  V. Bohr,et al.  Preferential DNA repair of (6-4) photoproducts in the dihydrofolate reductase gene of Chinese hamster ovary cells. , 1989, The Journal of biological chemistry.

[5]  H. Vrieling,et al.  DNA strand specificity for UV-induced mutations in mammalian cells , 1989, Molecular and cellular biology.

[6]  Joseph A. DiGiuseppe,et al.  Bleomycin-induced DNA repair synthesis in permeable human fibroblasts: mediation of long-patch and short-patch repair by distinct DNA polymerases. , 1989, Biochemistry.

[7]  M. Smerdon,et al.  Site-specific DNA repair at the nucleosome level in a yeast minichromosome , 1990, Cell.

[8]  P. Hanawalt,et al.  Quantification of aminofluorene adduct formation and repair in defined DNA sequences in mammalian cells using the UVRABC nuclease. , 1989, The Journal of biological chemistry.

[9]  P. Hanawalt,et al.  DNA repair in an active gene: Removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall , 1985, Cell.

[10]  M. Smerdon DNA Excision Repair at the Nucleosome Level of Chromatin , 1989 .

[11]  D. Mitchell,et al.  Unique DNA repair properties of a xeroderma pigmentosum revertant , 1987, Molecular and cellular biology.

[12]  Y. Pommier,et al.  Expression of the poly(ADP-ribose) polymerase gene following natural and induced DNA strand breakage and effect of hyperexpression on DNA repair. , 1990, Carcinogenesis.

[13]  M. Smerdon,et al.  Enhanced DNA repair synthesis in hyperacetylated nucleosomes. , 1989, The Journal of biological chemistry.

[14]  L. Mullenders,et al.  The residual repair capacity of xeroderma pigmentosum complementation group C fibroblasts is highly specific for transcriptionally active DNA. , 1990, Nucleic acids research.

[15]  A. Sancar,et al.  Transcription preferentially inhibits nucleotide excision repair of the template DNA strand in vitro. , 1990, The Journal of biological chemistry.

[16]  M. Smerdon,et al.  Bleomycin-induced DNA damage and repair in human cells permeabilized with lysophosphatidylcholine. , 1990, Cancer research.

[17]  F. Althaus,et al.  Uncoupling of DNA excision repair and nucleosomal unfolding in poly(ADP-ribose)-depleted mammalian cells. , 1990, Carcinogenesis.

[18]  D. Mitchell,et al.  Nonrandom induction of pyrimidine-pyrimidone (6-4) photoproducts in ultraviolet-irradiated human chromatin. , 1990, The Journal of biological chemistry.

[19]  P. Sung,et al.  The RAD6 protein of Saccharomyces cerevisiae polyubiquitinates histones, and its acidic domain mediates this activity. , 1988, Genes & development.

[20]  L. Thompson,et al.  CHO mutant UV61 removes (6-4) photoproducts but not cyclobutane dimers. , 1989, Mutagenesis.

[21]  T. Sugimura,et al.  Striking similarity of the distribution patterns of the poly(ADP-ribose) polymerase and DNA polymerase beta among various mouse organs. , 1990, Biochemical and biophysical research communications.

[22]  L. Mullenders,et al.  The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[23]  B. A. Kunz,et al.  Site and strand specificity of UVB mutagenesis in the SUP4-o gene of yeast. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[24]  E. Geiduschek,et al.  Transcription factor IIIB generates extended DNA interactions in RNA polymerase III transcription complexes on tRNA genes , 1989, Molecular and cellular biology.

[25]  S. Leadon Differential repair of DNA damage in specific nucleotide sequences in monkey cells. , 1986, Nucleic acids research.

[26]  F. Thoma Protein-DNA interactions and nuclease-sensitive regions determine nucleosome positions on yeast plasmid chromatin. , 1986, Journal of molecular biology.

[27]  R. Waters,et al.  Differential repair of UV damage in Saccharomyces cerevisiae is cell cycle dependent. , 1990, The EMBO journal.

[28]  D. Bazett-Jones,et al.  Histone hyperacetylation can induce unfolding of the nucleosome core particle. , 1990, Nucleic acids research.

[29]  L. Prakash,et al.  Expression of the Saccharomyces cerevisiae DNA repair gene RAD6 that encodes a ubiquitin conjugating enzyme, increases in response to DNA damage and in meiosis but remains constant during the mitotic cell cycle. , 1990, Nucleic acids research.

[30]  J. Pehrson Thymine dimer formation as a probe of the path of DNA in and between nucleosomes in intact chromatin. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[31]  R. Poot,et al.  Differential repair of UV damage in rad mutants of Saccharomyces cerevisiae: a possible function of G2 arrest upon UV irradiation , 1990, Molecular and cellular biology.

[32]  P. Hanawalt,et al.  Processing of psoralen adducts in an active human gene: Repair and replication of DNA containing monoadducts and interstrand cross-links , 1987, Cell.

[33]  E. Bradbury,et al.  Nucleosome linking number change controlled by acetylation of histones H3 and H4. , 1990, The Journal of biological chemistry.

[34]  K. Kohn,et al.  Heterogeneity of nitrogen mustard-induced DNA damage and repair at the level of the gene in Chinese hamster ovary cells. , 1990, The Journal of biological chemistry.

[35]  D. Hunting,et al.  Aphidicolin-sensitive DNA repair synthesis in human fibroblasts damaged with bleomycin is distinct from UV-induced repair. , 1990, Carcinogenesis.

[36]  R. Wood,et al.  Influence of RNA synthesis on DNA-repair replication in human cell extracts. , 1990, Mutation research.

[37]  P. van de Putte,et al.  Differential repair of UV damage in Saccharomyces cerevisiae. , 1989, Nucleic acids research.

[38]  P. Hanawalt,et al.  Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene , 1987, Cell.

[39]  A. Huletsky,et al.  The effect of poly(ADP-ribosyl)ation on native and H1-depleted chromatin. A role of poly(ADP-ribosyl)ation on core nucleosome structure. , 1989, The Journal of biological chemistry.

[40]  M. Smerdon,et al.  DNA repair in a small yeast plasmid folded into chromatin. , 1990, Nucleic acids research.

[41]  P. Hanawalt,et al.  Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed DNA strand , 1989, Nature.

[42]  N. J. Patton,et al.  Preferential DNA repair of alkali-labile sites within the active insulin gene. , 1990, The Journal of biological chemistry.

[43]  J. Davie,et al.  Histone acetylation alters the capacity of the H1 histones to condense transcriptionally active/competent chromatin. , 1990, The Journal of biological chemistry.

[44]  D. Mitchell,et al.  THE BIOLOGY OF THE (6–4) PHOTOPRODUCT , 1989, Photochemistry and photobiology.

[45]  J. Hoeijmakers,et al.  The second zinc-finger domain of poly(ADP-ribose) polymerase determines specificity for single-stranded breaks in DNA. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[46]  V. Zakian,et al.  Construction, replication, and chromatin structure of TRP1 RI circle, a multiple-copy synthetic plasmid derived from Saccharomyces cerevisiae chromosomal DNA , 1982, Molecular and cellular biology.

[47]  M. Smerdon,et al.  Nucleosome rearrangement in human cells following short patch repair of DNA damaged by bleomycin. , 1990, Biochemistry.

[48]  J M Gale,et al.  UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[49]  S. Elgin Chromatin structure and gene activity. , 1990, Current opinion in cell biology.

[50]  P. Hanawalt,et al.  Repair of N-methylpurines in specific DNA sequences in Chinese hamster ovary cells: absence of strand specificity in the dihydrofolate reductase gene. , 1989, Proceedings of the National Academy of Sciences of the United States of America.