On machine learning force fields for metallic nanoparticles
暂无分享,去创建一个
Aldo Glielmo | Claudio Zeni | Kevin Rossi | Francesca Baletto | K. Rossi | C. Zeni | F. Baletto | Aldo Glielmo
[1] S. Bulusu,et al. c-T phase diagram and Landau free energies of (AgAu)55 nanoalloy via neural-network molecular dynamic simulations. , 2017, The Journal of chemical physics.
[2] Gerbrand Ceder,et al. Efficient and accurate machine-learning interpolation of atomic energies in compositions with many species , 2017, 1706.06293.
[3] P. Erhart,et al. Beyond Magic Numbers: Atomic Scale Equilibrium Nanoparticle Shapes for Any Size. , 2017, Nano letters.
[4] H. Scheraga,et al. Monte Carlo-minimization approach to the multiple-minima problem in protein folding. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[5] J. Skilling. Nested sampling for general Bayesian computation , 2006 .
[6] Michele Ceriotti,et al. Atom-density representations for machine learning. , 2018, The Journal of chemical physics.
[7] Chang Q. Sun. Size dependence of nanostructures: Impact of bond order deficiency , 2007 .
[8] S. Bulusu,et al. A transferable artificial neural network model for atomic forces in nanoparticles. , 2018, The Journal of chemical physics.
[9] Volker L. Deringer,et al. Machine learning based interatomic potential for amorphous carbon , 2016, 1611.03277.
[10] Jonathan P. K. Doye,et al. On potential energy surfaces and relaxation to the global minimum , 1996 .
[11] Shweta Jindal,et al. Neural network potentials for dynamics and thermodynamics of gold nanoparticles. , 2017, The Journal of chemical physics.
[12] Rampi Ramprasad,et al. Adaptive machine learning framework to accelerate ab initio molecular dynamics , 2015 .
[13] Michael Fernandez,et al. Identification of Nanoparticle Prototypes and Archetypes. , 2015, ACS nano.
[14] Jeffrey C Grossman,et al. Crystal Graph Convolutional Neural Networks for an Accurate and Interpretable Prediction of Material Properties. , 2017, Physical review letters.
[15] Kohn,et al. Density functional and density matrix method scaling linearly with the number of atoms. , 1996, Physical review letters.
[16] First-principles determination of the structure of NaN and NaN- clusters with up to 80 atoms. , 2011, The Journal of chemical physics.
[17] Kurt Hornik,et al. Approximation capabilities of multilayer feedforward networks , 1991, Neural Networks.
[18] R. Johnston,et al. Global optimization of clusters using electronic structure methods , 2013 .
[19] Gábor Csányi,et al. Thermodynamics of CuPt nanoalloys , 2018, Scientific Reports.
[20] G. Rossi,et al. Searching for low-energy structures of nanoparticles: a comparison of different methods and algorithms , 2009, Journal of physics. Condensed matter : an Institute of Physics journal.
[21] Michele Parrinello,et al. Generalized neural-network representation of high-dimensional potential-energy surfaces. , 2007, Physical review letters.
[22] Joanna Aizenberg,et al. Probing Atomic Distributions in Mono- and Bimetallic Nanoparticles by Supervised Machine Learning. , 2018, Nano letters.
[23] Yanchao Wang,et al. Particle-swarm structure prediction on clusters. , 2012, The Journal of chemical physics.
[24] Gábor Csányi,et al. Gaussian approximation potentials: A brief tutorial introduction , 2015, 1502.01366.
[25] David J. Wales,et al. Kinetic analysis of discrete path sampling stationary point databases , 2006, cond-mat/0604165.
[26] R. Palmer,et al. Experimental evidence for fluctuating, chiral-type Au55 clusters by direct atomic imaging. , 2012, Nano letters (Print).
[27] Rampi Ramprasad,et al. Learning scheme to predict atomic forces and accelerate materials simulations , 2015, 1505.02701.
[28] C. Noguez. Surface Plasmons on Metal Nanoparticles: The Influence of Shape and Physical Environment , 2007 .
[29] R. Johnston. Evolving better nanoparticles: Genetic algorithms for optimising cluster geometries , 2003 .
[30] Ole Winther,et al. A Deep Learning Approach to Identify Local Structures in Atomic‐Resolution Transmission Electron Microscopy Images , 2018, Advanced Theory and Simulations.
[31] Noam Bernstein,et al. De novo exploration and self-guided learning of potential-energy surfaces , 2019, npj Computational Materials.
[32] B. Cuenya. Synthesis and catalytic properties of metal nanoparticles: Size, shape, support, composition, and oxidation state effects , 2010 .
[33] Josh E. Campbell,et al. Machine learning for the structure–energy–property landscapes of molecular crystals† †Electronic supplementary information (ESI) available. See DOI: 10.1039/c7sc04665k , 2017, Chemical science.
[34] David J Wales,et al. Comparison of double-ended transition state search methods. , 2007, The Journal of chemical physics.
[35] Steven D. Brown,et al. Neural network models of potential energy surfaces , 1995 .
[36] Artem R Oganov,et al. Method for Simultaneous Prediction of Atomic Structure and Stability of Nanoclusters in a Wide Area of Compositions. , 2018, The journal of physical chemistry letters.
[37] Aldo Glielmo,et al. Efficient nonparametric n -body force fields from machine learning , 2018, 1801.04823.
[38] Peter Sollich,et al. Accurate interatomic force fields via machine learning with covariant kernels , 2016, 1611.03877.
[39] S. Bulusu,et al. Modeling of DFT quality neural network potential for sodium clusters: Application to melting of sodium clusters (Na20 to Na40) , 2016 .
[40] Guigang Zhang,et al. Deep Learning , 2016, Int. J. Semantic Comput..
[41] Carl E. Rasmussen,et al. Gaussian processes for machine learning , 2005, Adaptive computation and machine learning.
[42] R. Ferrando,et al. Experimental determination of the energy difference between competing isomers of deposited, size-selected gold nanoclusters , 2018, Nature Communications.
[43] Noam Bernstein,et al. Machine learning unifies the modeling of materials and molecules , 2017, Science Advances.
[44] Kersti Hermansson,et al. Representation of Intermolecular Potential Functions by Neural Networks , 1998 .
[45] Jonathan Vandermause,et al. On-the-fly active learning of interpretable Bayesian force fields for atomistic rare events , 2020, npj Computational Materials.
[46] Matthias Rupp,et al. Unified representation of molecules and crystals for machine learning , 2017, Mach. Learn. Sci. Technol..
[47] Nathan S. Lewis,et al. Machine-Learning Methods Enable Exhaustive Searches for Active Bimetallic Facets and Reveal Active Site Motifs for CO2 Reduction , 2017 .
[48] K. Müller,et al. Fast and accurate modeling of molecular atomization energies with machine learning. , 2011, Physical review letters.
[49] K. Rossi,et al. Metallic nanoparticles meet metadynamics. , 2015, The Journal of chemical physics.
[50] Petros Drineas,et al. CUR matrix decompositions for improved data analysis , 2009, Proceedings of the National Academy of Sciences.
[51] Tejs Vegge,et al. Genetic algorithms for computational materials discovery accelerated by machine learning , 2019, npj Computational Materials.
[52] Geng Sun,et al. Metastable Structures in Cluster Catalysis from First-Principles: Structural Ensemble in Reaction Conditions and Metastability Triggered Reactivity. , 2018, Journal of the American Chemical Society.
[53] Alexie M. Kolpak,et al. Grand canonical molecular dynamics simulations of Cu–Au nanoalloys in thermal equilibrium using reactive ANN potentials , 2015 .
[54] Alessandro De Vita,et al. Building Nonparametric n-Body Force Fields Using Gaussian Process Regression , 2019, Machine Learning Meets Quantum Physics.
[55] Zhenwei Li,et al. Molecular dynamics with on-the-fly machine learning of quantum-mechanical forces. , 2015, Physical review letters.
[56] Giulia Rossi,et al. Electronic and structural shell closure in AgCu and AuCu nanoclusters. , 2006, The journal of physical chemistry. B.
[57] D. W. Noid,et al. Potential energy surfaces for macromolecules. A neural network technique , 1992 .
[58] Chris J. Pickard,et al. Hyperspatial optimization of structures , 2019, Physical Review B.
[59] Yu Xie,et al. Global minimization of gold clusters by combining neural network potentials and the basin-hopping method. , 2015, Nanoscale.
[60] Geoffrey E. Hinton,et al. Bayesian Learning for Neural Networks , 1995 .
[61] A. Laio,et al. Metadynamics: a method to simulate rare events and reconstruct the free energy in biophysics, chemistry and material science , 2008 .
[62] Michael Gastegger,et al. Molecular Dynamics with Neural Network Potentials , 2018, Machine Learning Meets Quantum Physics.
[63] Michele Ceriotti,et al. Recognizing Local and Global Structural Motifs at the Atomic Scale. , 2018, Journal of chemical theory and computation.
[64] D. Wales,et al. Grand and Semigrand Canonical Basin-Hopping , 2015, Journal of chemical theory and computation.
[65] Jörg Behler,et al. Automatic selection of atomic fingerprints and reference configurations for machine-learning potentials. , 2018, The Journal of chemical physics.
[66] Adam S. Foster,et al. Machine learning hydrogen adsorption on nanoclusters through structural descriptors , 2018, npj Computational Materials.
[67] F. Baletto,et al. Structural properties of nanoclusters: Energetic, thermodynamic, and kinetic effects , 2005 .
[68] Nongnuch Artrith,et al. High-dimensional neural network potentials for metal surfaces: A prototype study for copper , 2012 .
[69] Scott M Woodley,et al. An efficient genetic algorithm for structure prediction at the nanoscale. , 2017, Nanoscale.
[70] Nicola Gaston,et al. Building machine learning force fields for nanoclusters. , 2018, The Journal of chemical physics.
[71] D. Lu,et al. Supervised Machine-Learning-Based Determination of Three-Dimensional Structure of Metallic Nanoparticles. , 2017, The journal of physical chemistry letters.
[72] Gábor Csányi,et al. Efficient sampling of atomic configurational spaces. , 2009, The journal of physical chemistry. B.
[73] Nongnuch Artrith,et al. Understanding the composition and activity of electrocatalytic nanoalloys in aqueous solvents: a combination of DFT and accurate neural network potentials. , 2014, Nano letters.
[74] Christian Trott,et al. Spectral neighbor analysis method for automated generation of quantum-accurate interatomic potentials , 2014, J. Comput. Phys..
[75] Nongnuch Artrith,et al. Neural network potentials for metals and oxides – First applications to copper clusters at zinc oxide , 2013 .
[76] Huanchen Zhai,et al. Ensemble-Average Representation of Pt Clusters in Conditions of Catalysis Accessed through GPU Accelerated Deep Neural Network Fitting Global Optimization. , 2016, Journal of chemical theory and computation.
[77] Alexander V. Shapeev,et al. Moment Tensor Potentials: A Class of Systematically Improvable Interatomic Potentials , 2015, Multiscale Model. Simul..
[78] Amanda S Barnard,et al. Predicting archetypal nanoparticle shapes using a combination of thermodynamic theory and machine learning. , 2018, Nanoscale.
[79] Jordan Dorrell,et al. Thermodynamics and the potential energy landscape: case study of small water clusters. , 2019, Physical chemistry chemical physics : PCCP.
[80] R. Johnston,et al. Nanoalloys: from theory to applications of alloy clusters and nanoparticles. , 2008, Chemical reviews.
[81] Isaac Tamblyn,et al. Convolutional neural networks for atomistic systems , 2017, Computational Materials Science.
[82] S. Hajinazar,et al. Multitribe evolutionary search for stable Cu-Pd-Ag nanoparticles using neural network models. , 2019, Physical chemistry chemical physics : PCCP.
[83] Chad A Mirkin,et al. Gold nanoparticles for biology and medicine. , 2010, Angewandte Chemie.
[84] N. Turner,et al. Biocatalytic desymmetrization of an atropisomer with both an enantioselective oxidase and ketoreductases. , 2010, Angewandte Chemie.
[85] Joonhee Kang,et al. First-principles database driven computational neural network approach to the discovery of active ternary nanocatalysts for oxygen reduction reaction. , 2018, Physical chemistry chemical physics : PCCP.
[86] C. Catlow,et al. Controlling Structural Transitions in AuAg Nanoparticles through Precise Compositional Design. , 2016, The journal of physical chemistry letters.
[87] K-R Müller,et al. SchNet - A deep learning architecture for molecules and materials. , 2017, The Journal of chemical physics.
[88] Ryosuke Jinnouchi,et al. Extrapolating Energetics on Clusters and Single-Crystal Surfaces to Nanoparticles by Machine-Learning Scheme , 2017 .
[89] A. Laio,et al. Escaping free-energy minima , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[90] Ryosuke Jinnouchi,et al. Predicting Catalytic Activity of Nanoparticles by a DFT-Aided Machine-Learning Algorithm. , 2017, The journal of physical chemistry letters.
[91] K. Rossi,et al. The effect of chemical ordering and lattice mismatch on structural transitions in phase segregating nanoalloys. , 2017, Physical chemistry chemical physics : PCCP.
[92] Jonathan Doye,et al. Global minima for transition metal clusters described by Sutton–Chen potentials , 1997 .
[93] K. Rossi,et al. A genomic characterisation of monometallic nanoparticles. , 2018, Physical chemistry chemical physics : PCCP.
[94] Bjørk Hammer,et al. Neural-network-enhanced evolutionary algorithm applied to supported metal nanoparticles , 2018 .
[95] R. Kondor,et al. On representing chemical environments , 2012, 1209.3140.
[96] Jonathan Vandermause,et al. On-the-Fly Bayesian Active Learning of Interpretable Force-Fields for Atomistic Rare Events , 2019 .
[97] Cormac Toher,et al. Universal fragment descriptors for predicting properties of inorganic crystals , 2016, Nature Communications.