The time-to-digital converter(TDC) aims to mark an accurate timestamp at the time of input signal comes. The Multi-phase Clock sampling method is an usual way to map the TDC into an FPGA. Traditionally, this method provides a medium accuracy and low resources occupation. In this paper, we present a new architecture of TDC base on the 2-ISERDES in the SelectIO, rather than utilizing the Slice resources by the old way. The ISERDESes based TDC is equivalent to a 8 equidistant phase-shifted clocks TDC, with maximum clock frequency 900MHz. The least significant bit(LSB) is 139ps, which is 445% better than traditional architecture.