Mutations in NOTCH2 in families with Hajdu‐Cheney syndrome

Hajdu‐Cheney syndrome (HCS) is a rare genetic disorder whose hallmark is acro‐osteolysis, shortening of terminal phalanges, and generalized osteoporosis. We assembled a cohort of seven families with the condition and performed whole exome resequencing on a selected set of affected patients. One protein‐coding gene, NOTCH2, carried heterozygous truncating variants in all patients and their affected family members. Our results replicate recently published studies of HCS and further support this as the causal gene for the disorder. In total, we identified five novel and one previously reported mutation, all clustered near the carboxyl terminus of the gene, suggesting an allele specific genotype‐phenotype effect since other mutations in NOTCH2 have been reported to cause a form of Alagille syndrome. Notch‐mediated signaling is known to play a role in bone metabolism. Our results support a potential therapeutic role for Notch pathways in treatment of osteoporosis. Hum Mutat 32:1114–1117, 2011. ©2011 Wiley‐Liss, Inc.

[1]  Steven Henikoff,et al.  SIFT: predicting amino acid changes that affect protein function , 2003, Nucleic Acids Res..

[2]  F. McKiernan Integrated anti-remodeling and anabolic therapy for the osteoporosis of Hajdu-Cheney syndrome , 2006, Osteoporosis International.

[3]  I. Krantz,et al.  Alagille syndrome. , 1997, Journal of medical genetics.

[4]  Richard Durbin,et al.  Sequence analysis Fast and accurate short read alignment with Burrows – Wheeler transform , 2009 .

[5]  Andrew P. Weng,et al.  Activating Mutations of NOTCH1 in Human T Cell Acute Lymphoblastic Leukemia , 2004, Science.

[6]  J. Harrow,et al.  The GENCODE exome: sequencing the complete human exome , 2011, European Journal of Human Genetics.

[7]  V. Domingues,et al.  Acro-osteolysis , 2012, The Lancet.

[8]  P. Shannon,et al.  Exome sequencing identifies the cause of a Mendelian disorder , 2009, Nature Genetics.

[9]  Stijn van Dongen,et al.  miRBase: tools for microRNA genomics , 2007, Nucleic Acids Res..

[10]  F. McKiernan Integrated anti-remodeling and anabolic therapy for the osteoporosis of Hajdu–Cheney syndrome , 2007, Osteoporosis International.

[11]  Pierre Lindenbaum,et al.  Truncating mutations in the last exon of NOTCH2 cause a rare skeletal disorder with osteoporosis , 2011, Nature Genetics.

[12]  Raphael Kopan,et al.  The Canonical Notch Signaling Pathway: Unfolding the Activation Mechanism , 2009, Cell.

[13]  H. Hakonarson,et al.  ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data , 2010, Nucleic acids research.

[14]  I. Tikhonova,et al.  Genetic diagnosis by whole exome capture and massively parallel DNA sequencing , 2009, Proceedings of the National Academy of Sciences.

[15]  Brendan H. Lee,et al.  Dimorphic effects of Notch signaling in bone homeostasis , 2008, Nature Medicine.

[16]  Brendan H. Lee,et al.  NOTCHing the bone: insights into multi-functionality. , 2010, Bone.

[17]  Gonçalo R. Abecasis,et al.  The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..

[18]  N. Spinner,et al.  Pathologic Lower Extremity Fractures in Children With Alagille Syndrome , 2010, Journal of pediatric gastroenterology and nutrition.

[19]  S. Robertson,et al.  Mutations in NOTCH2 cause Hajdu-Cheney syndrome, a disorder of severe and progressive bone loss , 2011, Nature Genetics.

[20]  I. Krantz,et al.  NOTCH2 mutations cause Alagille syndrome, a heterogeneous disorder of the notch signaling pathway. , 2006, American journal of human genetics.

[21]  Alfonso Martinez Arias,et al.  Cell and molecular biology of Notch. , 2007, The Journal of endocrinology.

[22]  R. Kauntze,et al.  Cranio-skeletal dysplasia. , 1948, The British journal of radiology.

[23]  M. Hadchouel,et al.  Alagille syndrome. The widening spectrum of arteriohepatic dysplasia. , 2000, Clinics in liver disease.

[24]  K. Kozłowski,et al.  Hajdu-Cheney syndrome: report of a family and a short literature review. , 2006, Australasian radiology.

[25]  Jonathan M. Mudge,et al.  The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes. , 2009, Genome research.