GIGYF1/2-Driven Cooperation between ZNF598 and TTP in Posttranscriptional Regulation of Inflammatory Signaling.

[1]  Daniel J. Blankenberg,et al.  The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update , 2018, Nucleic Acids Res..

[2]  Nicolas Mandel,et al.  4EHP-independent repression of endogenous mRNAs by the RNA-binding protein GIGYF2 , 2018, Nucleic acids research.

[3]  C. Joazeiro.  Ribosomal Stalling During Translation: Providing Substrates for Ribosome-Associated Protein Quality Control. , 2017, Annual review of cell and developmental biology.

[4]  T. Tuschl,et al.  The E3 ubiquitin ligase and RNA-binding protein ZNF598 orchestrates ribosome quality control of premature polyadenylated mRNAs , 2017, Nature Communications.

[5]  E. Valkov,et al.  GIGYF1/2 proteins use auxiliary sequences to selectively bind to 4EHP and repress target mRNA expression , 2017, Genes & development.

[6]  Anders Krogh,et al.  Highly accessible AU-rich regions in 3’ untranslated regions are hotspots for binding of regulatory factors , 2017, PLoS Comput. Biol..

[7]  Raymond H. Mak,et al.  ZNF598 and RACK1 Regulate Mammalian Ribosome-Associated Quality Control Function by Mediating Regulatory 40S Ribosomal Ubiquitylation. , 2017, Molecular cell.

[8]  R. Hegde,et al.  Initiation of Quality Control during Poly(A) Translation Requires Site-Specific Ribosome Ubiquitination , 2017, Molecular cell.

[9]  J. Dean,et al.  The control of inflammation via the phosphorylation and dephosphorylation of tristetraprolin: a tale of two phosphatases , 2016, Biochemical Society transactions.

[10]  Manuel D. Díaz-Muñoz,et al.  The RNA-binding protein TTP is a global post-transcriptional regulator of feedback control in inflammation , 2016, Nucleic acids research.

[11]  Kristofor J. Webb,et al.  Recruitment of the 4EHP-GYF2 cap-binding complex to tetraproline motifs of tristetraprolin promotes repression and degradation of mRNAs with AU-rich elements , 2016, RNA.

[12]  G. Gao,et al.  Tristetraprolin Recruits Eukaryotic Initiation Factor 4E2 To Repress Translation of AU-Rich Element-Containing mRNAs , 2015, Molecular and Cellular Biology.

[13]  Anders Krogh,et al.  Drosophila Imp iCLIP identifies an RNA assemblage coordinating F-actin formation , 2015, Genome Biology.

[14]  T. Jensen,et al.  The human nuclear exosome targeting complex is loaded onto newly synthesized RNA to direct early ribonucleolysis. , 2015, Cell reports.

[15]  Alessandro Vullo,et al.  Ensembl 2015 , 2014, Nucleic Acids Res..

[16]  W. Huber,et al.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.

[17]  S. Gerstberger,et al.  A census of human RNA-binding proteins , 2014, Nature Reviews Genetics.

[18]  TiedjeChristopher,et al.  The role of mammalian MAPK signaling in regulation of cytokine mRNA stability and translation. , 2014 .

[19]  M. Gaestel,et al.  The role of mammalian MAPK signaling in regulation of cytokine mRNA stability and translation. , 2014, Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research.

[20]  Uwe Ohler,et al.  Global target mRNA specification and regulation by the RNA-binding protein ZFP36 , 2014, Genome Biology.

[21]  P. Blackshear,et al.  Structural basis for the recruitment of the human CCR4–NOT deadenylase complex by Tristetraprolin , 2013, Nature Structural &Molecular Biology.

[22]  M. Gaestel,et al.  The p38/MK2-Driven Exchange between Tristetraprolin and HuR Regulates AU–Rich Element–Dependent Translation , 2012, PLoS genetics.

[23]  A. Gingras,et al.  A Novel 4EHP-GIGYF2 Translational Repressor Complex Is Essential for Mammalian Development , 2012, Molecular and Cellular Biology.

[24]  J. Ule,et al.  Protein–RNA interactions: new genomic technologies and perspectives , 2012, Nature Reviews Genetics.

[25]  Sonja Althammer,et al.  Pyicos: a versatile toolkit for the analysis of high-throughput sequencing data , 2011, Bioinform..

[26]  C. Dinarello,et al.  Interleukin-1 in the pathogenesis and treatment of inflammatory diseases. , 2011, Blood.

[27]  H. Timmers,et al.  Not1 mediates recruitment of the deadenylase Caf1 to mRNAs targeted for degradation by tristetraprolin , 2011, Nucleic acids research.

[28]  Gene W. Yeo,et al.  Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping. , 2009, Molecular cell.

[29]  R. Lührmann,et al.  Proline-rich Sequence Recognition , 2009, Molecular & Cellular Proteomics.

[30]  B. K. Thakur,et al.  Functional Analysis of KSRP Interaction with the AU-Rich Element of Interleukin-8 and Identification of Inflammatory mRNA Targets , 2007, Molecular and Cellular Biology.

[31]  N. Sonenberg,et al.  Weak binding affinity of human 4EHP for mRNA cap analogs. , 2007, RNA.

[32]  Dong-er Zhang,et al.  ISG15 modification of the eIF4E cognate 4EHP enhances cap structure-binding activity of 4EHP. , 2007, Genes & development.

[33]  Joel E. Richardson,et al.  fjoin: Simple and Efficient Computation of Feature Overlaps , 2006, J. Comput. Biol..

[34]  J. Lykke-Andersen,et al.  Multiple processing body factors and the ARE binding protein TTP activate mRNA decapping. , 2005, Molecular cell.

[35]  Bing Zhang,et al.  WebGestalt: an integrated system for exploring gene sets in various biological contexts , 2005, Nucleic Acids Res..

[36]  J. Lykke-Andersen,et al.  Recruitment and activation of mRNA decay enzymes by two ARE-mediated decay activation domains in the proteins TTP and BRF-1. , 2005, Genes & development.

[37]  P. Anderson,et al.  MK2‐induced tristetraprolin:14‐3‐3 complexes prevent stress granule association and ARE‐mRNA decay , 2004, The EMBO journal.

[38]  M. Mann,et al.  AU Binding Proteins Recruit the Exosome to Degrade ARE-Containing mRNAs , 2001, Cell.

[39]  Klaus Resch,et al.  The p38 MAP kinase pathway signals for cytokine‐induced mRNA stabilization via MAP kinase‐activated protein kinase 2 and an AU‐rich region‐targeted mechanism , 1999, The EMBO journal.

[40]  A. Gingras,et al.  Cloning and Characterization of 4EHP, a Novel Mammalian eIF4E-related Cap-binding Protein* , 1998, The Journal of Biological Chemistry.

[41]  B. Haynes,et al.  A pathogenetic role for TNF alpha in the syndrome of cachexia, arthritis, and autoimmunity resulting from tristetraprolin (TTP) deficiency. , 1996, Immunity.