Mathematical Modeling of T-Cell Activation Kinetic
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[1] C. Harding. Class I MHC presentation of exogenous antigens , 1996, Journal of Clinical Immunology.
[2] M. Pospišil,et al. CD 69 antigen of human lymphocytes is a calcium-dependent carbohydrate-binding protein. , 1995, Biochemical and biophysical research communications.
[3] A. Lanzavecchia,et al. From TCR Engagement to T Cell Activation A Kinetic View of T Cell Behavior , 1999, Cell.
[4] Alexis M. Kalergis,et al. Efficient T cell activation requires an optimal dwell-time of interaction between the TCR and the pMHC complex , 2001, Nature Immunology.
[5] W. Hendrickson,et al. CD4 Dimers Constitute the Functional Component Required for T Cell Activation1 , 2002, The Journal of Immunology.
[6] D. Margulies. Interactions of TCRs with MHC-peptide complexes: a quantitative basis for mechanistic models. , 1997, Current opinion in immunology.
[7] M. Davis,et al. Kinetic discrimination in T-cell activation. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[8] L. Lanier,et al. CD28- T lymphocytes. Antigenic and functional properties. , 1993, Journal of immunology.
[9] R. Testi,et al. Transcriptional regulation of interleukin‐2 gene expression by CD69‐generated signals , 1993, European journal of immunology.
[10] F. Gao,et al. The CD154-CD40 T Cell Costimulation Pathway Is Required for Host Sensitization of CD8+ T Cells by Skin Grafts Via Direct Antigen Presentation1 , 2002, The Journal of Immunology.
[11] B. Goldstein,et al. Calculations show substantial serial engagement of T cell receptors. , 2001, Biophysical journal.
[12] A. Chakraborty,et al. Low T cell receptor expression and thermal fluctuations contribute to formation of dynamic multifocal synapses in thymocytes , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[13] I. Sidorov,et al. Mathematical modeling of T-cell proliferation. , 1993, Mathematical biosciences.
[14] C. Nelson,et al. Structural and Functional Consequences of Altering a Peptide MHC Anchor Residue1 , 2001, The Journal of Immunology.
[15] Mary Collins,et al. The B7 family of ligands and its receptors: new pathways for costimulation and inhibition of immune responses. , 2002, Annual review of immunology.
[16] H. Grey,et al. The minimal number of class II MHC-antigen complexes needed for T cell activation. , 1990, Science.
[17] Antonio Lanzavecchia,et al. A temporal and spatial summation model for T-cell activation: signal integration and antigen decoding. , 2002, Trends in immunology.
[18] R. Díez-Orejas,et al. CD4 Dependence of Activation Threshold and TCR Signalling in Mouse T Lymphocytes , 1997, Scandinavian journal of immunology.
[19] A. Weiss,et al. Negative regulation of CD45 by differential homodimerization of the alternatively spliced isoforms , 2002, Nature Immunology.
[20] Byron Goldstein,et al. Kinetic proofreading in receptor-mediated transduction of cellular signals: Receptor aggregation, partially activated receptors, and cytosolic messengers , 2002, Bulletin of mathematical biology.
[21] D. Vignali. The interaction between CD4 and MHC class II molecules and its effect on T cell function. , 1994, Behring Institute Mitteilungen.
[22] L. Turka,et al. The Proliferative Capacity of Individual Naive CD4+T Cells Is Amplified by Prolonged T Cell Antigen Receptor Triggering , 2002, The Journal of experimental medicine.
[23] Mark M. Davis,et al. Direct observation of ligand recognition by T cells , 2002, Nature.
[24] P. Allen,et al. A Kinetic Threshold between Negative and Positive Selection Based on the Longevity of the T Cell Receptor–Ligand Complex , 1999, The Journal of experimental medicine.
[25] A. D. de Weck,et al. Lymphokine regulation of human lymphocyte proliferation: formation of resting G0 cells by removal of interleukin 2 in cultures of proliferating T lymphocytes. , 1984, Cellular immunology.
[26] R. Zaru,et al. Cutting Edge: T Lymphocyte Activation by Repeated Immunological Synapse Formation and Intermittent Signaling 1 , 2003, The Journal of Immunology.
[27] C Benoist,et al. How much TCR does a T cell need? , 2001, Immunity.
[28] A. Coutinho,et al. A model of the immune network with B-T cell co-operation. I--Prototypical structures and dynamics. , 1996, Journal of theoretical biology.
[29] Y. Reiter,et al. Critical Role for CD8 in Binding of MHC Tetramers to TCR: CD8 Antibodies Block Specific Binding of Human Tumor- Specific MHC-Peptide Tetramers to TCR1 , 2001, The Journal of Immunology.
[30] V. Levitsky,et al. Is the Activity of Partially Agonistic MHC:Peptide Ligands Dependent on the Quality of Immunological Help? , 2006, Scandinavian journal of immunology.
[31] F. Sallusto,et al. Kinetics of dendritic cell activation: impact on priming of TH1, TH2 and nonpolarized T cells , 2000, Nature Immunology.
[32] Oreste Acuto,et al. CD28-mediated co-stimulation: a quantitative support for TCR signalling , 2003, Nature Reviews Immunology.
[33] V. Kuznetsov,et al. Kinetics of T cell proliferation: a mathematical model and data analysis. , 1998, Membrane & cell biology.
[34] R. Pastor,et al. ICAM‐1 enhances MHC‐peptide activation of CD8+ T cells without an organized immunological synapse , 2000, European journal of immunology.
[35] J. Carneiro,et al. A mathematical analysis of TCR serial triggering and down‐regulation , 2000, European journal of immunology.
[36] Jay T. Groves,et al. Synaptic pattern formation during cellular recognition , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[37] B. Evavold,et al. TCR Reserve: A Novel Principle of CD4 T Cell Activation by Weak Ligands 1 , 2003, The Journal of Immunology.
[38] J. Mauël,et al. CD69 and regulation of the immune function. , 1999, Immunopharmacology and immunotoxicology.
[39] D A Lauffenburger,et al. Computational Model for Effects of Ligand/Receptor Binding Properties on Interleukin‐2 Trafficking Dynamics and T Cell Proliferation Response , 2000, Biotechnology progress.
[40] L R Pease,et al. Alphabeta T cell receptor interactions with syngeneic and allogeneic ligands: affinity measurements and crystallization. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[41] P. González,et al. Modulation of T cell function by TCR/pMHC binding kinetics. , 2006, Immunobiology.
[42] Michael Loran Dustin,et al. T Cell Receptor Signaling Precedes Immunological Synapse Formation , 2002, Science.
[43] A. Shaw. T-cell activation and immunologic synapse , 2005, Immunologic research.
[44] M. Cahalan,et al. Mapping the sensitivity of T cells with an optical trap: polarity and minimal number of receptors for Ca(2+) signaling. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[45] P. Rabinovitch,et al. CD28 ligation in T-cell activation: evidence for two signal transduction pathways. , 1990, Blood.
[46] D. Wiest,et al. On the dynamics of TCR:CD3 complex cell surface expression and downmodulation. , 2000, Immunity.
[47] M. Nishimura,et al. Influence of human CD8 on antigen recognition by T-cell receptor-transduced cells. , 2006, Cancer research.
[48] S. Jameson,et al. Qualitative and quantitative differences in T cell receptor binding of agonist and antagonist ligands. , 1999, Immunity.
[49] P. Romero,et al. CD8β Increases CD8 Coreceptor Function and Participation in TCR–Ligand Binding , 1996, The Journal of experimental medicine.
[50] D. Busch,et al. MHC class I/peptide stability: implications for immunodominance, in vitro proliferation, and diversity of responding CTL. , 1998, Journal of immunology.
[51] W. Ellmeier,et al. CD8 T Cell Sensory Adaptation Dependent on TCR Avidity for Self-Antigens1 , 2005, The Journal of Immunology.
[52] R. Germain,et al. Serial TCR engagement and down-modulation by peptide:MHC molecule ligands: relationship to the quality of individual TCR signaling events. , 1999, Journal of immunology.
[53] Arup K Chakraborty,et al. In silico models for cellular and molecular immunology: successes, promises and challenges , 2003, Nature Immunology.
[54] J. Lamb,et al. The T cell surface protein, CD28. , 1997, The international journal of biochemistry & cell biology.
[55] P. V. D. Merwe. Do T cell receptors do it alone? , 2002, Nature Immunology.
[56] K. Smith,et al. The interleukin 2 receptor. , 1989, Annual review of cell biology.
[57] Kirk W. Johnson,et al. Ligand Binding Analysis of Soluble Interleukin-2 Receptor Complexes by Surface Plasmon Resonance (*) , 1995, The Journal of Biological Chemistry.
[58] T. Mak,et al. T cell responses are governed by avidity and co‐stimulatory thresholds , 1996, European journal of immunology.
[59] P. Anton van der Merwe,et al. The nature of molecular recognition by T cells , 2003, Nature Immunology.
[60] M. Jackson,et al. T Cells Can Use Either T Cell Receptor or Cd28 Receptors to Absorb and Internalize Cell Surface Molecules Derived from Antigen-Presenting Cells , 2000, The Journal of experimental medicine.
[61] J. Frelinger,et al. Peptidic Termini Play a Significant Role in TCR Recognition1 , 2002, The Journal of Immunology.
[62] Simon J Davis,et al. Molecular interactions mediating T cell antigen recognition. , 2003, Annual review of immunology.
[63] Daniel C Douek,et al. References Subscriptions Permissions Email Alerts Direct Ex Vivo Analysis of Human CD4+ Memory T Cell Activation Requirements at the Single Clonotype Level , 2013 .
[64] A. Lanzavecchia,et al. Serial triggering of many T-cell receptors by a few peptideMHC complexes , 1995, Nature.
[65] Daniel Coombs,et al. Supplementary information for Activated TCRs remain marked for internalization after dissociation from pMHC , 2022 .
[66] N. Burroughs,et al. TCR dynamics on the surface of living T cells. , 2001, International immunology.
[67] T. McKeithan,et al. Kinetic proofreading in T-cell receptor signal transduction. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[68] C. Geisler,et al. Ligand-Induced TCR Down-Regulation Is Not Dependent on Constitutive TCR Cycling1 , 2002, The Journal of Immunology.
[69] M. Mardiney,et al. Measurement of T-cell CD69 expression: a rapid and efficient means to assess mitogen- or antigen-induced proliferative capacity in normals. , 1996, Cytometry.
[70] Paula Kavathas,et al. Interplay between TCR Affinity and Necessity of Coreceptor Ligation: High-Affinity Peptide-MHC/TCR Interaction Overcomes Lack of CD8 Engagement 1 , 2003, The Journal of Immunology.
[71] Hye-Jung Kim,et al. Coevolution of TCR-MHC interactions: conserved MHC tertiary structure is not sufficient for interactions with the TCR. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[72] Graham M Lord,et al. A kinetic differentiation model for the action of altered TCR ligands. , 1999, Immunology today.
[73] G. Pedraza-Alva,et al. TCR-Dependent Cell Response Is Modulated by the Timing of CD43 Engagement1 , 2006, The Journal of Immunology.
[74] S. Bromley,et al. The immunological synapse: a molecular machine controlling T cell activation. , 1999, Science.
[75] D. Kranz,et al. Binding energetics of T-cell receptors: correlation with immunological consequences. , 1999, Immunology today.
[76] M. Davis,et al. Low affinity interaction of peptide-MHC complexes with T cell receptors. , 1991, Science.
[77] L. Walker,et al. IL-2-independent activation and proliferation in human T cells induced by CD28. , 1999, Journal of immunology.
[78] B R Franza,et al. A logical analysis of the process of T cell activation: different consequences depending on the state of CD28 engagement. , 2004, Journal of theoretical biology.
[79] Simon J Davis,et al. The kinetic-segregation model: TCR triggering and beyond , 2006, Nature Immunology.
[80] K. Ramyar,et al. Induction of T cell anergy by low numbers of agonist ligands. , 1999, Journal of immunology.
[81] R. V. van Lier,et al. Influence of CD28 co-stimulation on cytokine production is mainly regulated via interleukin-2. , 1994, Immunology.
[82] A. Shaw,et al. Immune synapses in T-cell activation. , 2006, Current opinion in immunology.
[83] N. Burroughs,et al. T-cell activation: A queuing theory analysis at low agonist density. , 2006, Biophysical journal.
[84] P. Linsley,et al. Human B7-1 (CD80) and B7-2 (CD86) bind with similar avidities but distinct kinetics to CD28 and CTLA-4 receptors. , 1994, Immunity.
[85] S. Valitutti,et al. The efficiency of antigen recognition by CD8+ CTL clones is determined by the frequency of serial TCR engagement. , 1998, Journal of immunology.
[86] M. Bachmann,et al. Estimation of maximal affinities between T-cell receptors and MHC/peptide complexes. , 1998, Molecular immunology.
[87] D. Moskophidis,et al. TCR affinity and negative regulation limit autoimmunity , 2004, Nature Medicine.
[88] M. Davis,et al. Thirty-six views of T-cell recognition. , 2000, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[89] Andrea Iaboni,et al. The immunological synapse and CD28-CD80 interactions , 2001, Nature Immunology.
[90] Denise Kirschner,et al. A Model to Predict Cell-Mediated Immune Regulatory Mechanisms During Human Infection with Mycobacterium tuberculosis1 , 2001, The Journal of Immunology.
[91] P. Linsley,et al. CD80 (B7-1) Binds Both CD28 and CTLA-4 with a Low Affinity and Very Fast Kinetics , 1997, The Journal of experimental medicine.
[92] S. Jameson,et al. The impact of duration versus extent of TCR occupancy on T cell activation: a revision of the kinetic proofreading model. , 2001, Immunity.
[93] R. Schwartz,et al. Adaptive Tolerance of CD4+ T Cells In Vivo: Multiple Thresholds in Response to a Constant Level of Antigen Presentation , 2001, The Journal of Immunology.
[94] Matthew W. Anderson,et al. Cooperativity during the formation of peptide/MHC class II complexes. , 2005, Biochemistry.
[95] P. Romero,et al. CD8 modulation of T-cell antigen receptor–ligand interactions on living cytotoxic T lymphocytes , 1995, Nature.
[96] Andrew K. Sewell,et al. The Human CD8 Coreceptor Effects Cytotoxic T Cell Activation and Antigen Sensitivity Primarily by Mediating Complete Phosphorylation of the T Cell Receptor ζ Chain* , 2001, The Journal of Biological Chemistry.
[97] Michael Meyer-Hermann,et al. Geometrically Repatterned Immunological Synapses Uncover Formation Mechanisms , 2006, PLoS Comput. Biol..
[98] Jan Engberg,et al. Modeling the interactions of a peptide-major histocompatibility class I ligand with its receptors. I. Recognition by two αβ T cell receptors , 2000, J. Comput. Aided Mol. Des..
[99] J. Ashwell,et al. Cutting edge: the CD45 tyrosine phosphatase is an inhibitor of Lck activity in thymocytes. , 1999, Journal of immunology.
[100] D. Margulies,et al. T cell receptor-MHC class I peptide interactions: affinity, kinetics, and specificity. , 1994, Science.
[101] Jorge Carneiro,et al. Three-Cell Interactions in T Cell-Mediated Suppression? A Mathematical Analysis of Its Quantitative Implications1 , 2001, The Journal of Immunology.
[102] Daniel Coombs,et al. T cell receptor binding kinetics required for T cell activation depend on the density of cognate ligand on the antigen-presenting cell. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[103] V. Maino,et al. Normal human CD4+ memory T cells display broad heterogeneity in their activation threshold for cytokine synthesis. , 1998, Journal of immunology.
[104] E. Sercarz,et al. An integrative model of regulation centered on recognition of TCR peptide/MHC complexes , 2001, Immunological reviews.
[105] M. Davis,et al. A kinetic basis for T cell receptor repertoire selection during an immune response. , 1999, Immunity.
[106] A. Chakraborty,et al. Correlation of a dynamic model for immunological synapse formation with effector functions: two pathways to synapse formation. , 2002, Trends in immunology.
[107] Michael D. Cahalan,et al. Imaging the Single Cell Dynamics of CD4+ T Cell Activation by Dendritic Cells in Lymph Nodes , 2004, The Journal of experimental medicine.
[108] F. Wurm,et al. CD8beta endows CD8 with efficient coreceptor function by coupling T cell receptor/CD3 to raft-associated CD8/p56(lck) complexes. , 2001 .
[109] J. Madrenas. Differential signalling by variant ligands of the T cell receptor and the kinetic model of T cell activation. , 1999, Life sciences.