Structural divergence and distant relationships in proteins: evolution of the globins.
暂无分享,去创建一个
[1] M. Bolognesi,et al. Nonvertebrate hemoglobins: structural bases for reactivity. , 1997, Progress in biophysics and molecular biology.
[2] M. Nardini,et al. The 109 residue nerve tissue minihemoglobin from Cerebratulus lacteus highlights striking structural plasticity of the alpha-helical globin fold. , 2002, Structure.
[3] A. Pesce,et al. Crystal structure of cytoglobin: the fourth globin type discovered in man displays heme hexa-coordination. , 2004, Journal of molecular biology.
[4] R. Hardison,et al. A brief history of hemoglobins: plant, animal, protist, and bacteria. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[5] Suman Kundu,et al. Plants, humans and hemoglobins. , 2003, Trends in plant science.
[6] Veronica Morea,et al. The Truncated Oxygen-avid Hemoglobin from Bacillus subtilis , 2005, Journal of Biological Chemistry.
[7] D. Rousseau,et al. A cooperative oxygen-binding hemoglobin from Mycobacterium tuberculosis. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[8] Martino Bolognesi,et al. Truncated Hemoglobins: A New Family of Hemoglobins Widely Distributed in Bacteria, Unicellular Eukaryotes, and Plants* 210 , 2002, The Journal of Biological Chemistry.
[9] M. Alam,et al. Globin-coupled sensors, protoglobins, and the last universal common ancestor. , 2005, Journal of inorganic biochemistry.
[10] M. Perutz,et al. The crystal structure of human deoxyhaemoglobin at 1.74 A resolution. , 1984, Journal of molecular biology.
[11] S. Phillips,et al. Structure and refinement of oxymyoglobin at 1.6 A resolution. , 1980, Journal of molecular biology.
[12] T. Burmester,et al. Cytoglobin: a novel globin type ubiquitously expressed in vertebrate tissues. , 2002, Molecular biology and evolution.
[13] P. Kallio,et al. Bacterial hemoglobins and flavohemoglobins: versatile proteins and their impact on microbiology and biotechnology. , 2003, FEMS microbiology reviews.
[14] Alessandra Pesce,et al. Human brain neuroglobin structure reveals a distinct mode of controlling oxygen affinity. , 2003, Structure.
[15] M. Blaxter,et al. A Hemoglobin with an Optical Function* , 2000, The Journal of Biological Chemistry.
[16] D. Kraus,et al. Hemoglobins of the Lucina pectinata/bacteria symbiosis. I. Molecular properties, kinetics and equilibria of reactions with ligands. , 1990, The Journal of biological chemistry.
[17] J. C. Kendrew,et al. Structure and function of haemoglobin: II. Some relations between polypeptide chain configuration and amino acid sequence , 1965 .
[18] D. Rousseau,et al. Structural investigations of the hemoglobin of the cyanobacterium Synechocystis PCC6803 reveal a unique distal heme pocket. , 2000, European journal of biochemistry.
[19] M. Alam,et al. Ancestral hemoglobins in Archaea. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[20] R. Weber,et al. Functional adaptation and its molecular basis in vertebrate hemoglobins, neuroglobins and cytoglobins , 2004, Respiratory Physiology & Neurobiology.
[21] M. Hargrove,et al. A Ubiquitously Expressed Human Hexacoordinate Hemoglobin* , 2002, The Journal of Biological Chemistry.
[22] Alessandra Pesce,et al. Structural bases for heme binding and diatomic ligand recognition in truncated hemoglobins. , 2005, Journal of inorganic biochemistry.
[23] M. Bolognesi,et al. Cyanide binding to truncated hemoglobins: a crystallographic and kinetic study. , 2004, Biochemistry.
[24] S. Kundu,et al. Crystallographic analysis of synechocystis cyanoglobin reveals the structural changes accompanying ligand binding in a hexacoordinate hemoglobin. , 2004, Journal of molecular biology.
[25] R. Watts,et al. Human Neuroglobin, a Hexacoordinate Hemoglobin That Reversibly Binds Oxygen* , 2001, Journal of Biological Chemistry.
[26] Kenneth A. Johnson,et al. The X-ray Structure of Ferric Escherichia coliFlavohemoglobin Reveals an Unexpected Geometry of the Distal Heme Pocket* , 2002, The Journal of Biological Chemistry.
[27] M. Couture,et al. Purification and spectroscopic characterization of a recombinant chloroplastic hemoglobin from the green unicellular alga Chlamydomonas eugametos. , 1996, European journal of biochemistry.
[28] M. Perutz,et al. Structure of hemoglobin. , 1960, Brookhaven symposia in biology.
[29] G G Dodson,et al. The structure of deoxy- and oxy-leghaemoglobin from lupin. , 1995, Journal of molecular biology.
[30] M Bolognesi,et al. A novel two‐over‐two α‐helical sandwich fold is characteristic of the truncated hemoglobin family , 2000, The EMBO journal.
[31] R. Poole,et al. Nitric oxide and nitrosative stress tolerance in bacteria. , 2005, Biochemical Society transactions.
[32] A. Lesk,et al. How different amino acid sequences determine similar protein structures: the structure and evolutionary dynamics of the globins. , 1980, Journal of molecular biology.
[33] O. H. Kapp,et al. Adventitious variability? The amino acid sequences of nonvertebrate globins. , 1993, Comparative biochemistry and physiology. B, Comparative biochemistry.
[34] S. Vinogradov. The structure of invertebrate extracellular hemoglobins (erythrocruorins and chlorocruorins). , 1985, Comparative biochemistry and physiology. B, Comparative biochemistry.
[35] L. Pauling,et al. Sickle cell anemia a molecular disease. , 1949, Science.
[36] Jindong Zhao,et al. Truncated hemoglobin from the cyanobacterium Synechococcus sp. PCC 7002: evidence for hexacoordination and covalent adduct formation in the ferric recombinant protein. , 2002, Biochemistry.
[37] S N Vinogradov,et al. Nonvertebrate hemoglobins: functions and molecular adaptations. , 2001, Physiological reviews.
[38] Paolo Ascenzi,et al. A TyrCD1/TrpG8 hydrogen bond network and a TyrB10—TyrCD1 covalent link shape the heme distal site of Mycobacterium tuberculosis hemoglobin O , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[39] Crystal structure of oxygenated Scapharca dimeric hemoglobin at 1.7-A resolution. , 1994, The Journal of biological chemistry.
[40] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[41] H. Paerl,et al. GlbN (cyanoglobin) is a peripheral membrane protein that is restricted to certain Nostoc spp , 1996, Journal of bacteriology.
[42] Sudhir Kumar,et al. MEGA2: molecular evolutionary genetics analysis software , 2001, Bioinform..
[43] A M Lesk,et al. Comparison of the structures of globins and phycocyanins: Evidence for evolutionary relationship , 1990, Proteins.
[44] Max F. Perutz,et al. Mechanisms of Cooperativity and Allosteric Regulation in Proteins , 1990 .
[45] S. Schaeffer,et al. Sulfide binding is mediated by zinc ions discovered in the crystal structure of a hydrothermal vent tubeworm hemoglobin. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[46] S. Vinogradov,et al. Mass spectrometric composition and molecular mass of Lumbricus terrestris hemoglobin: a refined model of its quaternary structure. , 1996, Journal of molecular biology.
[47] Geoffrey J. Barton,et al. The Jalview Java alignment editor , 2004, Bioinform..
[48] Benno P. Schoenborn,et al. Neutron diffraction reveals oxygen–histidine hydrogen bond in oxymyoglobin , 1981, Nature.
[49] V. Ingram,et al. A Specific Chemical Difference Between the Globins of Normal Human and Sickle-Cell Anæmia Hæmoglobin , 1956, Nature.
[50] A. Lesk,et al. Determinants of a protein fold. Unique features of the globin amino acid sequences. , 1987, Journal of molecular biology.
[51] C Chothia,et al. Haemoglobin: the structural changes related to ligand binding and its allosteric mechanism. , 1979, Journal of molecular biology.
[52] B. Wittenberg,et al. Truncated hemoglobin HbN protects Mycobacterium bovis from nitric oxide , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[53] L. Tisa,et al. Hemoglobin in five genetically diverse Frankia strains. , 2002, Canadian journal of microbiology.
[54] T. Egawa,et al. Structural and functional properties of hemoglobins from unicellular organisms as revealed by resonance Raman spectroscopy. , 2005, Journal of inorganic biochemistry.
[55] T. Burmester,et al. Globin genes are present in Ciona intestinalis. , 2003, Molecular biology and evolution.
[56] M Brunori,et al. Mini-myoglobin: preparation and reaction with oxygen and carbon monoxide. , 1986, Journal of molecular biology.
[57] Thomas Hankeln,et al. A vertebrate globin expressed in the brain , 2000, Nature.
[58] Y P Chen,et al. The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase from Amphitrite ornata Indicate Common Ancestry with Globins* , 2000, The Journal of Biological Chemistry.
[59] M. Potts,et al. Myoglobin in a Cyanobacterium , 1992, Science.
[60] Y Van de Peer,et al. Globins in nonvertebrate species: dispersal by horizontal gene transfer and evolution of the structure-function relationships. , 1996, Molecular biology and evolution.
[61] J. Thompson,et al. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. , 1997, Nucleic acids research.
[62] T. Takagi,et al. Protozoan myoglobin from Paramecium caudatum. Its unusual amino acid sequence. , 1989, Journal of molecular biology.
[63] J. Changeux,et al. ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL. , 1965, Journal of molecular biology.
[64] Joel Friedman,et al. Heme-Ligand Tunneling in Group I Truncated Hemoglobins*[boxs] , 2004, Journal of Biological Chemistry.
[65] R. Hardison. THE EVOLUTION OF HEMOGLOBIN , 1999 .
[66] M Bolognesi,et al. Mycobacterium tuberculosis hemoglobin N displays a protein tunnel suited for O2 diffusion to the heme , 2001, The EMBO journal.
[67] David Dantsker,et al. Reactions of Mycobacterium tuberculosis truncated hemoglobin O with ligands reveal a novel ligand-inclusive hydrogen bond network. , 2003, Biochemistry.
[68] Alessandra Pesce,et al. The Redox State of the Cell Regulates the Ligand Binding Affinity of Human Neuroglobin and Cytoglobin* , 2003, Journal of Biological Chemistry.
[69] R. Huber,et al. The structure of oxy-erythrocruorin at 1.4 X resolution. , 1978, Journal of molecular biology.
[70] Arthur M. Lesk,et al. Introduction to protein architecture : the structural biologyof proteins , 2001 .
[71] J. Kendrew,et al. A Three-Dimensional Model of the Myoglobin Molecule Obtained by X-Ray Analysis , 1958, Nature.
[72] J. Lecomte,et al. Characterization of the heme–histidine cross-link in cyanobacterial hemoglobins from Synechocystis sp. PCC 6803 and Synechococcus sp. PCC 7002 , 2004, JBIC Journal of Biological Inorganic Chemistry.
[73] Nicolas Carels,et al. Genome Properties of the Diatom Phaeodactylum tricornutum 212 , 2002, Plant Physiology.