NME8 rs2718058 polymorphism with Alzheimer's disease risk: a replication and meta-analysis

Recently, a large meta-analysis of five genome wide association studies (GWAS) has identified that a novel single nucleotide polymorphism (SNP) rs2718058, adjacent to gene NME8 on chromosome 7p14.1, was associated with late-onset Alzheimer's disease (LOAD) in Caucasians. However, the effect of rs2718058 on other populations remains unclear. In order to explore the relationship between rs2718058 and LOAD risk in a North Han Chinese population, we recruited 984 LOAD cases and 1354 healthy controls that matched for sex and age in this study. The results showed no significant differences in the genotypic or allelic distributions of rs2718058 polymorphism between LOAD cases and healthy controls, even though after stratification for APOE ε4 status and statistical adjustment for age, gender and APOE ε4 status (p > 0.05). However, a meta-analysis conducted in a sample of 82513 individuals confirmed a significant association between SNP rs2718058 and LOAD risk (OR = 1.08, 95%CI = 1.05–1.11) in the whole population. But there was still no positive results in Chinese subgroup (OR = 1.05, 95%CI = 0.93–1.17). In conclusion, the rs2718058 near gene NME8 on chromosome 7p14.1 might not play a major role in the genetic predisposition to LOAD in the North Han Chinese.

[1]  R. Tanzi,et al.  Thirty years of Alzheimer's disease genetics: the implications of systematic meta-analyses , 2008, Nature Reviews Neuroscience.

[2]  M. Folstein,et al.  Clinical diagnosis of Alzheimer's disease: Report of the NINCDS—ADRDA Work Group under the auspices of Department of Health and Human Services Task Force on Alzheimer's Disease , 2011, Neurology.

[3]  L. Tan,et al.  Lack of association between rs597668 polymorphism near EXOC3L2 and late-onset Alzheimer's disease in Han Chinese , 2012, Neuroscience Letters.

[4]  Wei Wang,et al.  Association of GWAS-linked loci with late-onset Alzheimer's disease in a northern Han Chinese population , 2013, Alzheimer's & Dementia.

[5]  L. Tan,et al.  Genetic association of PICALM polymorphisms with Alzheimer's disease in Han Chinese , 2011, Journal of the Neurological Sciences.

[6]  D. Selkoe Alzheimer's disease. , 2011, Cold Spring Harbor perspectives in biology.

[7]  H. Gu,et al.  The variant interleukin 1f7 rs3811047 G>A was associated with a decreased risk of gastric cardiac adenocarcinoma in a Chinese Han population , 2014, Tumor Biology.

[8]  Teng Jiang,et al.  NLRP3 polymorphisms are associated with late-onset Alzheimer's disease in Han Chinese , 2013, Journal of Neuroimmunology.

[9]  T. Lehtimäki,et al.  Rapid identification of apolipoprotein E genotypes by multiplex amplification refractory mutation system PCR and capillary gel electrophoresis. , 1999, Clinical chemistry.

[10]  M. Nöthen,et al.  Follow-up of loci from the International Genomics of Alzheimer's Disease Project identifies TRIP4 as a novel susceptibility gene , 2014, Translational Psychiatry.

[11]  Francis Barany,et al.  Universal DNA array detection of small insertions and deletions in BRCA1 and BRCA2 , 2000, Nature Biotechnology.

[12]  Jianfeng Xu,et al.  Risk prediction for sporadic Alzheimer's disease using genetic risk score in the Han Chinese population , 2015, Oncotarget.

[13]  Nick C Fox,et al.  Meta-analysis of 74,046 individuals identifies 11 new susceptibility loci for Alzheimer's disease , 2013, Nature Genetics.

[14]  H. Gu,et al.  Interleukin 17A rs3819024 A>G polymorphism is associated with an increased risk of gastric cardia adenocarcinoma in a Chinese population , 2014, Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals.

[15]  Y. Liu,et al.  Association between NME8 Locus Polymorphism and Cognitive Decline, Cerebrospinal Fluid and Neuroimaging Biomarkers in Alzheimer's Disease , 2014, PLoS ONE.

[16]  S. Rosenthal,et al.  Late-Onset Alzheimer’s Disease Genes and the Potentially Implicated Pathways , 2014, Current Genetic Medicine Reports.

[17]  Mary Miu Yee Waye,et al.  Polygenic Analysis of Late-Onset Alzheimer’s Disease from Mainland China , 2015, PloS one.