Tomographic flow cytometry by digital holography

High-throughput single-cell analysis is a challenging task. Label-free tomographic phase microscopy is an excellent candidate to perform this task. However, in-line tomography is very difficult to implement in practice because it requires a complex set-up for rotating the sample and examining the cell along several directions. We demonstrate that by exploiting the random rolling of cells while they are flowing along a microfluidic channel, it is possible to obtain in-line phase-contrast tomography, if smart strategies for wavefront analysis are adopted. In fact, surprisingly, a priori knowledge of the three-dimensional position and orientation of rotating cells is no longer needed because this information can be completely retrieved through digital holography wavefront numerical analysis. This approach makes continuous-flow cytotomography suitable for practical operation in real-world, single-cell analysis and with a substantial simplification of the optical system; that is, no mechanical scanning or multi-direction probing is required. A demonstration is given for two completely different classes of biosamples: red blood cells and diatom algae. An accurate characterization of both types of cells is reported, despite their very different nature and material content, thus showing that the proposed method can be extended by adopting two alternate strategies of wavefront analysis to many classes of cells.

[1]  Pasquale Memmolo,et al.  On the holographic 3D tracking of in vitro cells characterized by a highly-morphological change. , 2012, Optics express.

[2]  M. Grosso,et al.  Identification and molecular characterization of the ‐‐CAMPANIA deletion, a novel α°‐thalassemic defect, in two unrelated Italian families , 2010, American journal of hematology.

[3]  W. Bishara,et al.  Lens-free optical tomographic microscope with a large imaging volume on a chip , 2011, Proceedings of the National Academy of Sciences.

[4]  Kyoohyun Kim,et al.  Label-free characterization of white blood cells by measuring 3D refractive index maps. , 2015, Biomedical optics express.

[5]  M. Grosso,et al.  Erratum: “Identification and molecular characterization of the –CAMPANIA deletion, a novel α°‐thalassemic defect, in two unrelated Italian families” by Sessa et al., Am J Hematol 2010, DOI number 21591 , 2010 .

[6]  E. Cuche,et al.  Cell refractive index tomography by digital holographic microscopy. , 2006, Optics letters.

[7]  H. Amini,et al.  Inertial microfluidic physics. , 2014, Lab on a chip.

[8]  Hao F. Zhang,et al.  Visible light optical coherence tomography measures retinal oxygen metabolic response to systemic oxygenation , 2015, Light: Science & Applications.

[9]  Hongying Zhu,et al.  Optofluidic Tomography on a Chip. , 2011, Applied physics letters.

[10]  Michael Unser,et al.  Learning approach to optical tomography , 2015, 1502.01914.

[11]  Demetri Psaltis,et al.  Optofluidic microscopy--a method for implementing a high resolution optical microscope on a chip. , 2006, Lab on a chip.

[12]  S. D. Babacan,et al.  White-light diffraction tomography of unlabelled live cells , 2014, Nature Photonics.

[13]  B Javidi,et al.  Automatic focusing in digital holography and its application to stretched holograms. , 2011, Optics letters.

[14]  J. Ford,et al.  Red blood cell morphology , 2013, International journal of laboratory hematology.

[15]  Vittorio Bianco,et al.  Diagnostic Tools for Lab-on-Chip Applications Based on Coherent Imaging Microscopy , 2015, Proceedings of the IEEE.

[16]  P. Maffettone,et al.  Particle dynamics in viscoelastic liquids , 2015 .

[17]  P Memmolo,et al.  Digital holography as a method for 3D imaging and estimating the biovolume of motile cells. , 2013, Lab on a chip.

[18]  G. Ripandelli,et al.  Optical coherence tomography. , 1998, Seminars in ophthalmology.

[19]  Mor Habaza,et al.  Tomographic phase microscopy with 180° rotation of live cells in suspension by holographic optical tweezers. , 2015, Optics letters.

[20]  Jong Chul Ye,et al.  Real-time Visualization of 3-d Dynamic Microscopic Objects Using Optical Diffraction Tomography References and Links , 2022 .

[21]  C. Fang-Yen,et al.  Tomographic phase microscopy , 2008, Nature Methods.

[22]  Joseph M. Martel,et al.  Three-Dimensional Holographic Refractive-Index Measurement of Continuously Flowing Cells in a Microfluidic Channel. , 2014, Physical review applied.

[23]  Patrick S Doyle,et al.  Engineering particle trajectories in microfluidic flows using particle shape , 2013, Nature Communications.

[24]  P Memmolo,et al.  Red blood cell as an adaptive optofluidic microlens , 2015, Nature Communications.

[25]  Miles Padgett,et al.  Holographic optical tweezers and their relevance to lab on chip devices. , 2011, Lab on a chip.

[26]  D. Psaltis,et al.  Developing optofluidic technology through the fusion of microfluidics and optics , 2006, Nature.

[27]  M Shahid,et al.  [Alpha thalassemia]. , 1971, Le Journal medical libanais. The Lebanese medical journal.

[28]  Pasquale Memmolo,et al.  Recent advances in holographic 3D particle tracking , 2015 .

[29]  Nicolas C. Pégard,et al.  Flow Scanning Optical Tomography , 2013 .

[30]  Christian Depeursinge,et al.  Beyond the lateral resolution limit by phase imaging. , 2011, Journal of biomedical optics.

[31]  Gabriel Popescu,et al.  Real Time Blood Testing Using Quantitative Phase Imaging , 2013, PloS one.

[32]  Hongying Zhu,et al.  Holographic opto-fluidic microscopy , 2010, Optics express.

[33]  D. Branton,et al.  The molecular basis of erythrocyte shape. , 1986, Science.

[34]  Binghui Zheng,et al.  Toxic effects of fluoranthene and copper on marine diatom Phaeodactylum tricornutum. , 2008, Journal of environmental sciences.

[35]  Myung K. Kim,et al.  Interference techniques in digital holography , 2006 .

[36]  G D'Avino,et al.  Dynamics of prolate spheroidal elastic particles in confined shear flow. , 2015, Physical review. E, Statistical, nonlinear, and soft matter physics.

[37]  M. Mir,et al.  Blood testing at the single cell level using quantitative phase and amplitude microscopy , 2011, Biomedical optics express.

[38]  J. Hecksher-Sørensen,et al.  Optical Projection Tomography as a Tool for 3D Microscopy and Gene Expression Studies , 2002, Science.

[39]  Jerome Mertz,et al.  Optical sectioning microscopy with planar or structured illumination , 2011, Nature Methods.

[40]  Laura Waller,et al.  Video-rate processing in tomographic phase microscopy of biological cells using CUDA. , 2016, Optics express.

[41]  T. P. Popkova,et al.  Chloroplast structure of diatoms of different classes , 2009, Cell and Tissue Biology.

[42]  Gerhard Gompper,et al.  Deformation and dynamics of red blood cells in flow through cylindrical microchannels. , 2014, Soft matter.

[43]  YongKeun Park,et al.  Profiling individual human red blood cells using common-path diffraction optical tomography , 2014, Scientific Reports.

[44]  Pasquale Memmolo,et al.  3D morphometry of red blood cells by digital holography , 2014, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

[45]  A. Ozcan,et al.  High-throughput screening of large volumes of whole blood using structured illumination and fluorescent on-chip imaging. , 2012, Lab on a chip.

[46]  Mayka Sanchez,et al.  Functional and Clinical Impact of Novel Tmprss6 Variants in Iron‐Refractory Iron‐Deficiency Anemia Patients and Genotype–Phenotype Studies , 2014, Human mutation.