Landscape of tumor-infiltrating T cell repertoire of human cancers
暂无分享,去创建一个
Jun S. Liu | N. Hacohen | X. Liu | Catherine J. Wu | S. Signoretti | F. Hodi | T. Choueiri | S. Shukla | Bo Li | Jean-Christophe Pignon | Taiwen Li | Qianming Chen | Jinzeng Wang | Binbin Wang | Ruoxu Dou | Bo Li | Taiwen Li | Taiwen Li | X. Liu | Jun S. Liu | X. Liu
[1] Morten Nielsen,et al. Gapped sequence alignment using artificial neural networks: application to the MHC class I system , 2016, Bioinform..
[2] Scott D. Brown,et al. Profiling tissue-resident T cell repertoires by RNA sequencing , 2015, Genome Medicine.
[3] Mark J. Rieder,et al. Annotation of pseudogenic gene segments by massively parallel sequencing of rearranged lymphocyte receptor loci , 2015, Genome Medicine.
[4] Sri Krishna,et al. TCR contact residue hydrophobicity is a hallmark of immunogenic CD8+ T cell epitopes , 2015, Proceedings of the National Academy of Sciences.
[5] Jeffrey A Jones,et al. Immunoglobulin transcript sequence and somatic hypermutation computation from unselected RNA-seq reads in chronic lymphocytic leukemia , 2015, Proceedings of the National Academy of Sciences.
[6] T. Blankenstein,et al. Identification of human T-cell receptors with optimal affinity to cancer antigens using antigen-negative humanized mice , 2015, Nature Biotechnology.
[7] H. Ishwaran,et al. Radiation and Dual Checkpoint Blockade Activates Non-Redundant Immune Mechanisms in Cancer , 2015, Nature.
[8] N. Hacohen,et al. Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity , 2015, Cell.
[9] R. Emerson,et al. PD-1 blockade induces responses by inhibiting adaptive immune resistance , 2014, Nature.
[10] Bo Li,et al. A general framework for analyzing tumor subclonality using SNP array and DNA sequencing data , 2014, Genome Biology.
[11] R. Emerson,et al. High‐throughput sequencing of T‐cell receptors reveals a homogeneous repertoire of tumour‐infiltrating lymphocytes in ovarian cancer , 2013, The Journal of pathology.
[12] Mikhail Shugay,et al. MiTCR: software for T-cell receptor sequencing data analysis , 2013, Nature Methods.
[13] Bernd Hauck,et al. Chimeric antigen receptor-modified T cells for acute lymphoid leukemia. , 2013, The New England journal of medicine.
[14] E. Pamer,et al. Quantitative assessment of T-cell repertoire recovery after hematopoietic stem cell transplantation , 2012, Nature Medicine.
[15] Steven J. M. Jones,et al. Comprehensive molecular portraits of human breast tumors , 2012, Nature.
[16] Drew M. Pardoll,et al. The blockade of immune checkpoints in cancer immunotherapy , 2012, Nature Reviews Cancer.
[17] Morten Nielsen,et al. NNAlign: A Web-Based Prediction Method Allowing Non-Expert End-User Discovery of Sequence Motifs in Quantitative Peptide Data , 2011, PloS one.
[18] J. Wolchok,et al. Novel cancer immunotherapy agents with survival benefit: recent successes and next steps , 2011, Nature Reviews Cancer.
[19] A. Bagg,et al. Chimeric antigen receptor-modified T cells in chronic lymphoid leukemia. , 2011, The New England journal of medicine.
[20] M. Lefranc. IMGT, the International ImMunoGeneTics Information System. , 2011, Cold Spring Harbor protocols.
[21] Richard A. Moore,et al. Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million clonotypes. , 2011, Genome research.
[22] N. Friedman,et al. Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data , 2011, Nature Biotechnology.
[23] K. Silina,et al. Sperm-associated Antigens as Targets for Cancer Immunotherapy: Expression Pattern and Humoral Immune Response in Cancer Patients , 2011, Journal of immunotherapy.
[24] Derek Y. Chiang,et al. MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery , 2010, Nucleic acids research.
[25] Abigail Wacher,et al. Comprehensive assessment of T-cell receptor beta-chain diversity in alphabeta T cells. , 2009, Blood.
[26] Yao-Tseng Chen,et al. Cancer/testis (CT) antigens: Potential targets for immunotherapy , 2009, Cancer science.
[27] R. Holt,et al. Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing. , 2009, Genome research.
[28] René L. Warren,et al. Profiling model T-cell metagenomes with short reads , 2009, Bioinform..
[29] Ugo Del Monte,et al. Does the cell number 10(9) still really fit one gram of tumor tissue , 2009 .
[30] S. Rosenberg,et al. Adoptive cell transfer: a clinical path to effective cancer immunotherapy , 2008, Nature Reviews Cancer.
[31] D. Price,et al. The molecular basis for public T-cell responses? , 2008, Nature Reviews Immunology.
[32] J. Allison,et al. Recognition of a Ubiquitous Self Antigen by Prostate Cancer-Infiltrating CD8+ T Lymphocytes , 2008, Science.
[33] Hanhua Cheng,et al. Genome-wide detection of testis- and testicular cancer-specific alternative splicing. , 2007, Carcinogenesis.
[34] Lloyd J. Old,et al. Cancer/testis antigens, gametogenesis and cancer , 2005, Nature Reviews Cancer.
[35] Marie-Paule Lefranc,et al. IMGT, the international ImMunoGeneTics information system® , 2004, Nucleic Acids Res..
[36] G. Crooks,et al. WebLogo: a sequence logo generator. , 2004, Genome research.
[37] J. Mansilla-Soto,et al. VDJ Recombination , 2003, The Journal of experimental medicine.
[38] R. Schreiber,et al. Cancer immunoediting: from immunosurveillance to tumor escape , 2002, Nature Immunology.
[39] P. R. Sibbald,et al. CDR3 length in antigen-specific immune receptors , 1994, The Journal of experimental medicine.
[40] A. Schuurs,et al. Effects of gender and sex steroids on the immune response. , 1990, Journal of steroid biochemistry.
[41] Mark M. Davis,et al. T-cell antigen receptor genes and T-cell recognition , 1988, Nature.
[42] C. Drake,et al. Breathing new life into immunotherapy: review of melanoma, lung and kidney cancer , 2014, Nature Reviews Clinical Oncology.
[43] R Core Team,et al. R: A language and environment for statistical computing. , 2014 .
[44] Steven J. M. Jones,et al. Comprehensive molecular portraits of human breast tumours , 2013 .
[45] Y. Chien,et al. Antigen-recognition properties of murine γδ T cells , 2009, Springer Seminars in Immunopathology.
[46] Michael Kaufmann,et al. BMC Bioinformatics BioMed Central , 2005 .
[47] Y. Chien,et al. Antigen-recognition properties of murine gamma delta T cells. , 2000, Springer seminars in immunopathology.