Refined generalized multiscale entropy analysis for physiological signals

Multiscale entropy analysis has become a prevalent complexity measurement and been successfully applied in various fields. However, it only takes into account the information of mean values (first moment) in coarse-graining procedure. Then generalized multiscale entropy (MSEn) considering higher moments to coarse-grain a time series was proposed and MSEσ2 has been implemented. However, the MSEσ2 sometimes may yield an imprecise estimation of entropy or undefined entropy, and reduce statistical reliability of sample entropy estimation as scale factor increases. For this purpose, we developed the refined model, RMSEσ2, to improve MSEσ2. Simulations on both white noise and 1∕f noise show that RMSEσ2 provides higher entropy reliability and reduces the occurrence of undefined entropy, especially suitable for short time series. Besides, we discuss the effect on RMSEσ2 analysis from outliers, data loss and other concepts in signal processing. We apply the proposed model to evaluate the complexity of heartbeat interval time series derived from healthy young and elderly subjects, patients with congestive heart failure and patients with atrial fibrillation respectively, compared to several popular complexity metrics. The results demonstrate that RMSEσ2 measured complexity (a) decreases with aging and diseases, and (b) gives significant discrimination between different physiological/pathological states, which may facilitate clinical application.

[1]  David Rousseau,et al.  Multiscale Analysis of Microvascular Blood Flow: A Multiscale Entropy Study of Laser Doppler Flowmetry Time Series , 2011, IEEE Transactions on Biomedical Engineering.

[2]  Sergio Cerutti,et al.  Entropy, entropy rate, and pattern classification as tools to typify complexity in short heart period variability series , 2001, IEEE Transactions on Biomedical Engineering.

[3]  Danilo P. Mandic,et al.  Multivariate Multiscale Entropy Analysis , 2012, IEEE Signal Processing Letters.

[4]  Amir Bashan,et al.  Network physiology reveals relations between network topology and physiological function , 2012, Nature Communications.

[5]  Shuen-De Wu,et al.  Modified multiscale entropy for short-term time series analysis , 2013 .

[6]  Danilo P Mandic,et al.  Multivariate multiscale entropy: a tool for complexity analysis of multichannel data. , 2011, Physical review. E, Statistical, nonlinear, and soft matter physics.

[7]  J. Richman,et al.  Physiological time-series analysis using approximate entropy and sample entropy. , 2000, American journal of physiology. Heart and circulatory physiology.

[8]  Anne Humeau-Heurtier,et al.  Multiscale Entropy Study of Medical Laser Speckle Contrast Images , 2013, IEEE Transactions on Biomedical Engineering.

[9]  Niels Wessel,et al.  Entropy Measures in Heart Rate Variability Data , 2000, ISMDA.

[10]  I. Rezek,et al.  Stochastic complexity measures for physiological signal analysis , 1998, IEEE Transactions on Biomedical Engineering.

[11]  Yan Ruo-yu,et al.  Multi-scale Entropy Based Traffic Analysis and Anomaly Detection , 2008, 2008 Eighth International Conference on Intelligent Systems Design and Applications.

[12]  C. Peng,et al.  Analysis of complex time series using refined composite multiscale entropy , 2014 .

[13]  Peter Grassberger,et al.  Information and Complexity Measures in Dynamical Systems , 1991 .

[14]  Yi-Cheng Zhang Complexity and 1/f noise. A phase space approach , 1991 .

[15]  Pengjian Shang,et al.  EMD based refined composite multiscale entropy analysis of complex signals , 2015 .

[16]  Alejandro Ramírez-Rojas,et al.  Multiscale entropy analysis of electroseismic time series , 2008 .

[17]  C. Peng,et al.  What is physiologic complexity and how does it change with aging and disease? , 2002, Neurobiology of Aging.

[18]  Jeffrey M. Hausdorff,et al.  Physionet: Components of a New Research Resource for Complex Physiologic Signals". Circu-lation Vol , 2000 .

[19]  Madalena Costa,et al.  Multiscale entropy analysis of complex physiologic time series. , 2002, Physical review letters.

[20]  Zhongwei Li,et al.  Multi-scale entropy analysis of Mississippi River flow , 2007 .

[21]  Chien-Ming Chou,et al.  Wavelet-Based Multi-Scale Entropy Analysis of Complex Rainfall Time Series , 2011, Entropy.

[22]  A. Eke,et al.  Fractal characterization of complexity in temporal physiological signals , 2002, Physiological measurement.

[23]  H. Fogedby On the phase space approach to complexity , 1992 .

[24]  S. Pincus Approximate entropy (ApEn) as a complexity measure. , 1995, Chaos.

[25]  Danilo P. Mandic,et al.  A Multivariate Multiscale Fuzzy Entropy Algorithm with Application to Uterine EMG Complexity Analysis , 2016, Entropy.

[26]  Jing Fan,et al.  Traditional Chinese medicine: potential approaches from modern dynamical complexity theories , 2016, Frontiers of Medicine.

[27]  Ary L. Goldberger,et al.  Generalized Multiscale Entropy Analysis: Application to Quantifying the Complex Volatility of Human Heartbeat Time Series , 2015, Entropy.

[28]  C. E. SHANNON,et al.  A mathematical theory of communication , 1948, MOCO.

[29]  Chun-Chieh Wang,et al.  Time Series Analysis Using Composite Multiscale Entropy , 2013, Entropy.

[30]  L. Lipsitz Physiological complexity, aging, and the path to frailty. , 2004, Science of aging knowledge environment : SAGE KE.

[31]  Jeffrey M. Hausdorff,et al.  Multiscale entropy analysis of human gait dynamics. , 2003, Physica A.

[32]  Yi-Lwun Ho,et al.  Cardiac Autonomic Alteration and Metabolic Syndrome: An Ambulatory ECG-based Study in A General Population , 2017, Scientific Reports.

[33]  P. Ivanov,et al.  Effect of extreme data loss on long-range correlated and anticorrelated signals quantified by detrended fluctuation analysis. , 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

[34]  Madalena Costa,et al.  Multiscale entropy analysis of biological signals. , 2005, Physical review. E, Statistical, nonlinear, and soft matter physics.

[35]  Steven M. Pincus Assessing Serial Irregularity and Its Implications for Health , 2001, Annals of the New York Academy of Sciences.