Dual role of the C34 subunit of RNA polymerase III in transcription initiation

The C34 subunit of yeast RNA polymerase (pol) III is part of a subcomplex of three subunits which have no counterpart in the other two nuclear RNA polymerases. This subunit interacts with TFIIIB70 and is therefore thought to participate in pol III recruitment. To study the role of C34 in transcription, we have mutagenized RPC34, the gene encoding C34, and found that mutations affecting growth also altered C34 interaction with TFIIIB70. The two mutant pol III that were purified had catalytic properties indistinguishable from those of the wild‐type pol III on a poly[d(A–T)] template, while specific transcription of pol III genes in the presence of general transcription factors was impaired. The defect of the C34‐1124 mutant enzyme could be compensated by increasing the amount of pol III present in the reaction, suggesting that the enzyme had a lower affinity for pre‐initiation complexes. In contrast, the C34‐1109 mutant enzyme was defective in transcription initiation due to impaired open complex formation. These observations demonstrate that the C34 subunit is a major determinant in pol III recruitment by the pre‐initiation complex and further acts at a subsequent stage that involves the configuration of an initiation‐competent form of RNA polymerase.

[1]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[2]  C. Carles,et al.  A Cryptic DNA Binding Domain at the COOH Terminus of TFIIIB70 Affects Formation, Stability, and Function of Preinitiation Complexes* , 1997, The Journal of Biological Chemistry.

[3]  Z. Wang,et al.  Three human RNA polymerase III-specific subunits form a subcomplex with a selective function in specific transcription initiation. , 1997, Genes & development.

[4]  B. Bartholomew,et al.  Mapping the Contacts of Yeast TFIIIB and RNA Polymerase III at Various Distances from the Major Groove of DNA by DNA Photoaffinity Labeling* , 1996, The Journal of Biological Chemistry.

[5]  D. Lalo,et al.  RRN11 Encodes the Third Subunit of the Complex Containing Rrn6p and Rrn7p That Is Essential for the Initiation of rDNA Transcription by Yeast RNA Polymerase I* , 1996, The Journal of Biological Chemistry.

[6]  D. Bushnell,et al.  A Minimal Set of RNA Polymerase II Transcription Protein Interactions* , 1996, The Journal of Biological Chemistry.

[7]  Y. Nogi,et al.  RRN3 gene of Saccharomyces cerevisiae encodes an essential RNA polymerase I transcription factor which interacts with the polymerase independently of DNA template. , 1996, The EMBO journal.

[8]  William Arbuthnot Sir Lane,et al.  Cloning and Functional Characterization of the Gene Encoding the TFIIIB90 Subunit of RNA Polymerase III Transcription Factor TFIIIB* , 1996, The Journal of Biological Chemistry.

[9]  A. Sentenac,et al.  A suppressor of mutations in the class III transcription system encodes a component of yeast TFIIIB. , 1996, The EMBO journal.

[10]  A. Sentenac,et al.  Mutations in the alpha‐amanitin conserved domain of the largest subunit of yeast RNA polymerase III affect pausing, RNA cleavage and transcriptional transitions. , 1996, The EMBO journal.

[11]  A. Sentenac,et al.  Facilitated Recycling Pathway for RNA Polymerase III , 1996, Cell.

[12]  E. Geiduschek,et al.  Cloning, expression, and function of TFC5, the gene encoding the B" component of the Saccharomyces cerevisiae RNA polymerase III transcription factor TFIIIB. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[13]  A. Sentenac,et al.  The only essential function of TFIIIA in yeast is the transcription of 5S rRNA genes. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[14]  P. Thuriaux,et al.  A universally conserved region of the largest subunit participates in the active site of RNA polymerase III. , 1995, The EMBO journal.

[15]  M. Thomm,et al.  The Translation Product of the Presumptive Thermococcus celer TATA-binding Protein Sequence Is a Transcription Factor Related in Structure and Function to Methanococcus Transcription Factor B (*) , 1995, The Journal of Biological Chemistry.

[16]  Z. Wang,et al.  Structure and function of a human transcription factor TFIIIB subunit that is evolutionarily conserved and contains both TFIIB- and high-mobility-group protein 2-related domains. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[17]  A. Sentenac,et al.  Complex Interactions between Yeast TFIIIB and TFIIIC (*) , 1995, The Journal of Biological Chemistry.

[18]  P. Baumann,et al.  Molecular cloning of the transcription factor TFIIB homolog from Sulfolobus shibatae. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[19]  P. Thuriaux,et al.  A mutation in the C31 subunit of Saccharomyces cerevisiae RNA polymerase III affects transcription initiation. , 1995, The EMBO journal.

[20]  R. Tjian,et al.  Reconstitution of transcription factor SL1: exclusive binding of TBP by SL1 or TFIID subunits. , 1994, Science.

[21]  B. Brophy,et al.  Conserved functional domains of the RNA polymerase III general transcription factor BRF. , 1994, Genes & development.

[22]  R. Conaway,et al.  Cryptic DNA-binding domain in the C terminus of RNA polymerase II general transcription factor RAP30. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[23]  Y. Nogi,et al.  RRN6 and RRN7 encode subunits of a multiprotein complex essential for the initiation of rDNA transcription by RNA polymerase I in Saccharomyces cerevisiae. , 1994, Genes & development.

[24]  P. Thuriaux,et al.  Suppression of yeast RNA polymerase III mutations by FHL1, a gene coding for a fork head protein involved in rRNA processing , 1994, Molecular and cellular biology.

[25]  A. Wolffe RNA polymerase III transcription. , 1994, Current opinion in cell biology.

[26]  S. Elledge,et al.  The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases , 1993, Cell.

[27]  A. Sentenac,et al.  Interaction between a complex of RNA polymerase III subunits and the 70-kDa component of transcription factor IIIB. , 1993, The Journal of biological chemistry.

[28]  S. Fields,et al.  Elimination of false positives that arise in using the two-hybrid system. , 1993, BioTechniques.

[29]  A. Sentenac,et al.  TFIIIC relieves repression of U6 snRNA transcription by chromatin , 1993, Nature.

[30]  E. Geiduschek,et al.  Orientation and topography of RNA polymerase III in transcription complexes , 1993, Molecular and cellular biology.

[31]  A. Sentenac,et al.  The TATA-binding protein participates in TFIIIB assembly on tRNA genes. , 1992, Nucleic acids research.

[32]  E. Geiduschek,et al.  The role of the TATA-binding protein in the assembly and function of the multisubunit yeast RNA polymerase III transcription factor, TFIIIB , 1992, Cell.

[33]  P. Thuriaux,et al.  An essential and specific subunit of RNA polymerase III (C) is encoded by gene RPC34 in Saccharomyces cerevisiae. , 1992, The Journal of biological chemistry.

[34]  S. Buratowski,et al.  A suppressor of TBP mutations encodes an RNA polymerase III transcription factor with homology to TFIIB , 1992, Cell.

[35]  I. Willis,et al.  PCF4 encodes an RNA polymerase III transcription factor with homology to TFIIB , 1992, Cell.

[36]  N. Chiannilkulchai,et al.  RPC82 encodes the highly conserved, third-largest subunit of RNA polymerase C (III) from Saccharomyces cerevisiae , 1992, Molecular and cellular biology.

[37]  S. Hahn,et al.  A yeast TFIIB-related factor involved in RNA polymerase III transcription. , 1992, Genes & development.

[38]  E. Geiduschek,et al.  Formation of open and elongating transcription complexes by RNA polymerase III. , 1992, Journal of molecular biology.

[39]  J. Greenblatt,et al.  Recombinant TBP, transcription factor IIB, and RAP30 are sufficient for promoter recognition by mammalian RNA polymerase II. , 1992, The Journal of biological chemistry.

[40]  P. Thuriaux,et al.  Effect of mutations in a zinc-binding domain of yeast RNA polymerase C (III) on enzyme function and subunit association , 1992, Molecular and cellular biology.

[41]  D. Reinberg,et al.  The small subunit of transcription factor IIF recruits RNA polymerase II into the preinitiation complex. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[42]  Ellson Y. Chen,et al.  Overview of manual and automated DNA sequencing by the dideoxy chain termination method , 1991 .

[43]  P. Thuriaux,et al.  The RPC31 gene of Saccharomyces cerevisiae encodes a subunit of RNA polymerase C (III) with an acidic tail , 1990, Molecular and cellular biology.

[44]  E. Geiduschek,et al.  S. cerevisiae TFIIIB is the transcription initiation factor proper of RNA polymerase III, while TFIIIA and TFIIIC are assembly factors , 1990, Cell.

[45]  B. O’Malley,et al.  The progesterone receptor stimulates cell-free transcription by enhancing the formation of a stable preinitiation complex , 1990, Cell.

[46]  P. Sharp,et al.  Five intermediate complexes in transcription initiation by RNA polymerase II , 1989, Cell.

[47]  J. Buhler,et al.  Conditional mutants of RPC160, the gene encoding the largest subunit of RNA polymerase C in Saccharomyces cerevisiae. , 1988, Genetics.

[48]  A. Sentenac,et al.  Yeast RNA polymerase C and its subunits. Specific antibodies as structural and functional probes. , 1985, The Journal of biological chemistry.

[49]  H. Feldmann,et al.  Nucleotide sequences of yeast genes for tRNASer2, tRNAArg2 and tRNAVal1: homology blocks occur in the vicinity of different tRNA genes , 1982, The EMBO journal.

[50]  K. Struhl,et al.  Yeast transcriptional regulatory mechanisms. , 1995, Annual review of genetics.

[51]  F. Sherman Getting started with yeast. , 1991, Methods in enzymology.

[52]  A. Wolffe Transcription complexes. , 1990, Progress in clinical and biological research.

[53]  G. Natsoulis,et al.  5-Fluoroorotic acid as a selective agent in yeast molecular genetics. , 1987, Methods in enzymology.

[54]  Thomas A. Kunkel,et al.  Rapid and efficient site-specific mutagenesis without phenotypic selection. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[55]  W. Gilbert,et al.  Sequencing end-labeled DNA with base-specific chemical cleavages. , 1980, Methods in enzymology.

[56]  D. Botstein,et al.  Systematic Mutational Analysis of the Yeast Actl Gene , 2022 .