Complete nucleotide sequence and gene rearrangement of the mitochondrial genome of Occidozyga martensii

[1]  Kevin McDonough.  Amphibian Species of the World: An Online Reference (Version 6) , 2014 .

[2]  D. Wake,et al.  Efficient sequencing of Anuran mtDNAs and a mitogenomic exploration of the phylogeny and evolution of frogs. , 2013, Molecular biology and evolution.

[3]  X. Xia.  DAMBE5: A Comprehensive Software Package for Data Analysis in Molecular Biology and Evolution , 2013, Molecular biology and evolution.

[4]  Chen Shao,et al.  The complete mitochondrial genome of Hoplobatrachus rugulosus (Anura: Dicroglossidae) , 2012, Mitochondrial DNA.

[5]  M. Nei,et al.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. , 2011, Molecular biology and evolution.

[6]  Iker Irisarri,et al.  The complete mitochondrial genome of the relict frog Leiopelma archeyi: Insights into the root of the frog Tree of Life , 2010, Mitochondrial DNA.

[7]  A. Kurabayashi,et al.  Complete mitochondrial genomes and novel gene rearrangements in two dicroglossid frogs, Hoplobatrachus tigerinus and Euphlyctis hexadactylus, from Bangladesh. , 2010, Genes & genetic systems.

[8]  O. Gascuel,et al.  New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. , 2010, Systematic biology.

[9]  Yan Zhou,et al.  Complete nucleotide sequence and gene organization of the mitochondrial genome of Paa spinosa (Anura: Ranoidae). , 2009, Gene.

[10]  L. Nie,et al.  The complete mitochondrial genome of the large-headed frog, Limnonectes bannaensis (Amphibia: Anura), and a novel gene organization in the vertebrate mtDNA. , 2009, Gene.

[11]  M. Hasegawa,et al.  Complete nucleotide sequence and gene arrangement of the mitochondrial genome of the crab-eating frog Fejervarya cancrivora and evolutionary implications. , 2009, Gene.

[12]  R. A. Pyron,et al.  Evolutionary and Biogeographic Origins of High Tropical Diversity in Old World Frogs (Ranidae) , 2009, Evolution; international journal of organic evolution.

[13]  M. Pabijan,et al.  Comparative Analysis of Mitochondrial Genomes in Bombina (Anura; Bombinatoridae) , 2008, Journal of Molecular Evolution.

[14]  A. Kurabayashi,et al.  Complete mitochondrial genomes of three neobatrachian anurans: a case study of divergence time estimation using different data and calibration settings. , 2008, Gene.

[15]  Xiaobing Wu,et al.  Rearrangement of a mitochondrial tRNA gene of the concave-eared torrent frog, Amolops tormotus. , 2007, Gene.

[16]  Masami Hasegawa,et al.  Complete nucleotide sequence of the mitochondrial genome of a Malagasy poison frog Mantella madagascariensis: evolutionary implications on mitochondrial genomes of higher anuran groups. , 2006, Molecular phylogenetics and evolution.

[17]  Hui Zhou,et al.  Mitogenomic perspectives on the origin and phylogeny of living amphibians. , 2005, Systematic biology.

[18]  H. Yonekawa,et al.  Complete nucleotide sequence of the mitochondrial genome of Schlegel's tree frog Rhacophorus schlegelii (family Rhacophoridae): duplicated control regions and gene rearrangements. , 2005, Genes & genetic systems.

[19]  P. Larson.  Ontogeny, phylogeny, and morphology in anuran larvae: Morphometric analysis of cranial development and evolution in Rana tadpoles (Anura: Ranidae) , 2005, Journal of morphology.

[20]  Hui Zhou,et al.  The complete mitochondrial genome of a tree frog, Polypedates megacephalus (Amphibia: Anura: Rhacophoridae), and a novel gene organization in living amphibians. , 2005, Gene.

[21]  B. Su,et al.  The mitochondrial genome organization of the rice frog, Fejervarya limnocharis (Amphibia: Anura): a new gene order in the vertebrate mtDNA. , 2005, Gene.

[22]  K. Roelants,et al.  Archaeobatrachian paraphyly and pangaean diversification of crown-group frogs. , 2005, Systematic biology.

[23]  R. Zardoya,et al.  Phylogenetic relationships of discoglossid frogs (Amphibia:Anura:Discoglossidae) based on complete mitochondrial genomes and nuclear genes. , 2004, Gene.

[24]  R. Zardoya,et al.  Phylogeny of caecilian amphibians (Gymnophiona) based on complete mitochondrial genomes and nuclear RAG1. , 2004, Molecular phylogenetics and evolution.

[25]  A. Meyer,et al.  Phylogeny and comparative substitution rates of frogs inferred from sequences of three nuclear genes. , 2004, Molecular biology and evolution.

[26]  H. Yonekawa,et al.  Complete nucleotide sequence and gene rearrangement of the mitochondrial genome of the bell-ring frog, Buergeria buergeri (family Rhacophoridae). , 2004, Genes & genetic systems.

[27]  K. Roelants,et al.  Endemic ranid (Amphibia: Anura) genera in southern mountain ranges of the Indian subcontinent represent ancient frog lineages: evidence from molecular data. , 2004, Molecular phylogenetics and evolution.

[28]  A. Meyer,et al.  Recent Advances in the (Molecular) Phylogeny of Vertebrates , 2003 .

[29]  L. Trueb,et al.  Revisiting the contribution of larval characters to an analysis of phylogenetic relationships of basal anurans , 2003 .

[30]  John P. Huelsenbeck,et al.  MrBayes 3: Bayesian phylogenetic inference under mixed models , 2003, Bioinform..

[31]  M. Hasegawa,et al.  Complete nucleotide sequence and gene rearrangement of the mitochondrial genome of the Japanese pond frog Rana nigromaculata. , 2001, Genes & genetic systems.

[32]  J. Boore.  Complete mitochondrial genome sequence of the polychaete annelid Platynereis dumerilii. , 2001, Molecular biology and evolution.

[33]  X. Xia,et al.  DAMBE: software package for data analysis in molecular biology and evolution. , 2001, The Journal of heredity.

[34]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[35]  Wei Qian,et al.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. , 2000, Molecular biology and evolution.

[36]  A. Kurabayashi,et al.  Complete sequence of the mitochondrial DNA of the primitive opisthobranch gastropod Pupa strigosa: systematic implication of the genome organization. , 2000, Molecular biology and evolution.

[37]  J. Boore.  Animal mitochondrial genomes. , 1999, Nucleic acids research.

[38]  J. Boore,et al.  Big trees from little genomes: mitochondrial gene order as a phylogenetic tool. , 1998, Current opinion in genetics & development.

[39]  J. Thompson,et al.  Multiple sequence alignment with Clustal X. , 1998, Trends in biochemical sciences.

[40]  R. Marco,et al.  Artemia mitochondrial genome: molecular biology and evolutive considerations. , 1997, Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology.

[41]  D. Mindell,et al.  Mitochondrial gene order adjacent to the control region in crocodile, turtle, and tuatara. , 1996, Molecular phylogenetics and evolution.

[42]  M. Nishida,et al.  Variations in mitochondrial tRNA gene organization of reptiles as phylogenetic markers. , 1995, Molecular biology and evolution.

[43]  S. Hedges,et al.  Phylogenetic relationships of amphibian families inferred from DNA sequences of mitochondrial 12S and 16S ribosomal RNA genes. , 1995, Molecular biology and evolution.

[44]  S. Pääbo,et al.  Rearrangements of mitochondrial transfer RNA genes in marsupials , 1991, Journal of Molecular Evolution.

[45]  W. Brown,et al.  Tandem duplications in animal mitochondrial DNAs: variation in incidence and gene content among lizards. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[46]  J. Hixson,et al.  Both the conserved stem-loop and divergent 5'-flanking sequences are required for initiation at the human mitochondrial origin of light-strand DNA replication. , 1986, The Journal of biological chemistry.

[47]  B. Roe,et al.  The complete nucleotide sequence of the Xenopus laevis mitochondrial genome. , 1985, The Journal of biological chemistry.

[48]  R. Punnett,et al.  The journal of genetics , 1910, Zeitschrift für Induktive Abstammungs- und Vererbungslehre.

[49]  Ya-ping Zhang,et al.  Molecular phylogeny of the Chinese ranids inferred from nuclear and mitochondrial DNA sequences , 2007 .

[50]  W. Rychlik,et al.  OLIGO 7 primer analysis software. , 2007, Methods in molecular biology.

[51]  P. Moler,et al.  THE AMPHIBIAN TREE OF LIFE , 2006 .

[52]  A. Dubois.  Amphibia mundi. 1.1. An ergotaxonomy of recent amphibians , 2005 .

[53]  K. Zhou,et al.  Phylogenetic relationships among Chinese ranids inferred from sequence data set of 12S and 16S rDNA , 2005 .

[54]  D. Swofford.  PAUP*: Phylogenetic analysis using parsimony (*and other methods), Version 4.0b10 , 2002 .

[55]  David Posada,et al.  MODELTEST: testing the model of DNA substitution , 1998, Bioinform..

[56]  T. Papenfuss,et al.  Tandem duplication via light-strand synthesis may provide a precursor for mitochondrial genomic rearrangement. , 1998, Molecular biology and evolution.

[57]  T. Papenfuss,et al.  Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome. , 1997, Molecular biology and evolution.

[58]  R. Inger.  COMMENTARY ON A PROPOSED CLASSIFICATION OF THE FAMILY RANIDAE , 1996 .

[59]  S. Hedges,et al.  A Molecular Perspective on Lissamphibian Phylogeny , 1993 .

[60]  D. Cannatella,et al.  THE MAJOR CLADES OF FROGS , 1993 .

[61]  D. Wolstenholme,et al.  Animal mitochondrial DNA: structure and evolution. , 1992, International review of cytology.

[62]  A. Dubois.  Notes sur la classification des Ranidae (Amphibiens Anoures) , 1992 .

[63]  L. Fei,et al.  Key to Chinese Amphibians , 1990 .

[64]  L. Trueb,et al.  Biology of Amphibians , 1986 .