Evaluation of resistance to wheat stem rust and identification of resistance genes in wheat lines from Heilongjiang province

Wheat stem rust, caused by Puccinia graminis f. sp. tritici, (Pgt) is a devastating disease in wheat production. The disease has been effectively controlled since the 1970s due to the widespread use of the Sr31 resistance gene. However, Sr31 has lost its effectiveness following the emergence and spread of the Ug99 race variants. Therefore, there is an urgent global effort to identify new germplasm resources effective against those races. In this study, the resistance to Pgt of 95 wheat advance lines from Heilongjiang Province was evaluated using three predominant races of Pgt, 21C3CTTTM, 34C0MKGSM, and 34C3MTGQM, in China at the seedling and adult plant stage. The presence of 6 Sr genes (Sr2, Sr24, Sr25, Sr26, Sr31, and Sr38) was evaluated using linked molecular markers. The results showed that 86 (90.5%) wheat lines had plant stage resistance to all three races. Molecular marker analysis showed that 24 wheat lines likely carried Sr38, 15 wheat lines likely carried Sr2, 11 wheat lines likely carried Sr31, while none of the wheat lines carried Sr24, Sr25, or Sr26. Furthermore, six out of the 95 wheat lines tested carried both Sr2 and Sr38, three contained both Sr31 and Sr38, and two wheat lines contained both Sr2 and Sr31. Wheat lines with known Sr genes may be used as donor parents for further breeding programs to provide resistance to stem rust.

[1]  T. Burki Food security and nutrition in the world , 2022, The Lancet Diabetes & Endocrinology.

[2]  Julie Meyer Food and Agriculture Organization of the United Nations (FAO) , 2021, Yearbook of the United Nations 1984.

[3]  G. Bai,et al.  Molecular marker dissection of stem rust resistance in Nebraska bread wheat germplasm , 2019, Scientific Reports.

[4]  L. Szabo,et al.  Presence of a sexual population of Puccinia graminis f. sp. tritici in Georgia provides a hotspot for genotypic and phenotypic diversity. , 2019, Phytopathology.

[5]  Jie Zhao,et al.  Race and virulence of asexual and sexual populations of Puccinia graminis f. sp. tritici in China from 2009 to 2015 , 2018, European Journal of Plant Pathology.

[6]  Y. Xuan,et al.  Identification of stem rust resistance genes in wheat cultivars in China using molecular markers , 2018, PeerJ.

[7]  Wenjun Zhang,et al.  Identification and characterization of wheat stem rust resistance gene Sr21 effective against the Ug99 race group at high temperature , 2018, PLoS genetics.

[8]  Y. Xuan,et al.  Evaluation and identification of stem rust resistance genes Sr2, Sr24, Sr25, Sr26, Sr31 and Sr38 in wheat lines from Gansu Province in China , 2017, PeerJ.

[9]  Wenjun Zhang,et al.  Identification and characterization of Sr13, a tetraploid wheat gene that confers resistance to the Ug99 stem rust race group , 2017, Proceedings of the National Academy of Sciences.

[10]  J. Poland,et al.  Genomic and pedigree-based prediction for leaf, stem, and stripe rust resistance in wheat , 2017, Theoretical and Applied Genetics.

[11]  S. Bhattacharya Deadly new wheat disease threatens Europe’s crops , 2017, Nature.

[12]  T. Li,et al.  Seedling Resistance to Stem Rust and Molecular Marker Analysis of Resistance Genes in Wheat Cultivars of Yunnan, China , 2016, PloS one.

[13]  R. Yadav,et al.  Recent trends and perspectives of molecular markers against fungal diseases in wheat , 2015, Front. Microbiol..

[14]  Michael Pumphrey,et al.  Phenotypic and Genotypic Characterization of Race TKTTF of Puccinia graminis f. sp. tritici that Caused a Wheat Stem Rust Epidemic in Southern Ethiopia in 2013-14. , 2015, Phytopathology.

[15]  Sridhar Bhavani,et al.  Emergence and Spread of New Races of Wheat Stem Rust Fungus: Continued Threat to Food Security and Prospects of Genetic Control. , 2015, Phytopathology.

[16]  C. Morris,et al.  Catalogue of gene symbols for wheat: 2013-14 Supplement , 2014 .

[17]  Wu Xian-xi Stem Rust Resistance Evaluation and Ug99-Resistance Gene Detection of 139 Wheat Cultivars , 2014 .

[18]  J. Dvorak,et al.  The Gene Sr33, an Ortholog of Barley Mla Genes, Encodes Resistance to Wheat Stem Rust Race Ug99 , 2013, Science.

[19]  K. Hammer,et al.  Genetic diversity assessment of Ethiopian tetraploid wheat landraces and improved durum wheat varieties using microsatellites and markers linked with stem rust resistance , 2013, Genetic Resources and Crop Evolution.

[20]  A. Kokhmetova,et al.  Identification of sources of resistance to wheat stem rust using molecular markers , 2012, Russian Journal of Genetics: Applied Research.

[21]  D. Hodson,et al.  The emergence of Ug99 races of the stem rust fungus is a threat to world wheat production. , 2011, Annual review of phytopathology.

[22]  J. Doležel,et al.  An accurate DNA marker assay for stem rust resistance gene Sr2 in wheat , 2011, Theoretical and Applied Genetics.

[23]  S. Jain,et al.  Emergence of Virulence to Sr25 of Puccinia graminis f. sp. tritici on Wheat in India. , 2009, Plant disease.

[24]  R. Ward,et al.  Detection of Virulence to Resistance Gene Sr24 Within Race TTKS of Puccinia graminis f. sp. tritici. , 2008, Plant disease.

[25]  H. Bariana,et al.  Breeding triple rust resistant wheat cultivars for Australia using conventional and marker-assisted selection technologies , 2007 .

[26]  V. Gupta,et al.  Molecular mapping of stem and leaf rust resistance in wheat , 2005, Theoretical and Applied Genetics.

[27]  M. Hayden,et al.  Sequence tagged microsatellites for the Xgwm533 locus provide new diagnostic markers to select for the presence of stem rust resistance gene Sr2 in bread wheat (Triticum aestivum L.) , 2004, Theoretical and Applied Genetics.

[28]  W. Spielmeyer,et al.  Identification and mapping of molecular markers linked to rust resistance genes located on chromosome 1RS of rye using wheat-rye translocation lines , 2002, Theoretical and Applied Genetics.

[29]  R. Singh,et al.  Detection of Virulence to Wheat Stem Rust Resistance Gene Sr31 in Puccinia graminis. f. sp. tritici in Uganda. , 2000, Plant disease.

[30]  Jiming Jiang,et al.  Compensation indices of radiation-induced wheat-Agropyron elongatum translocations conferring resistance to leaf rust and stem rust , 1994 .

[31]  H. Bariana,et al.  Cytogenetic studies in wheat. XV. Location of rust resistance genes in VPM1 and their genetic linkage with other disease resistance genes in chromosome 2A. , 1993, Genome.

[32]  A. Roelfs,et al.  Rust diseases of wheat: Concepts and methods of disease management , 1992 .

[33]  J. Martens,et al.  An international system of nomenclature for Puccinia graminis f.sp. tritici. , 1988 .

[34]  E. C. Stakman,et al.  Identification of physiologic races of Puccinia graminis var. tritici. , 1944 .