Spatial distribution patterns of plague hosts : point pattern analysis of the burrows of great gerbils in Kazakhstan Reference

Reference: Wilschut Liesbeth I., Laudisoit Anne, Hughes Nelika K., Addink Elisabeth A., de Jong Steven M., Heesterbeek Hans A.P., Reijniers Jonas, Eagle Sally, Dubyanskiy Vladimir M., Begon Mike.Spatial distribution patterns of plague hosts : point pattern analysis of the burrows of great gerbils in Kazakhstan Journal of biogeography ISSN 0305-0270 42:7(2015), p. 1281-1292 Full text (Publishers DOI): http://dx.doi.org/doi:10.1111/jbi.12534 To cite this reference: http://hdl.handle.net/10067/1257450151162165141

[1]  Edzer J. Pebesma,et al.  Multivariable geostatistics in S: the gstat package , 2004, Comput. Geosci..

[2]  M. Keeling,et al.  Estimating spatial coupling in epidemiological systems: a mechanistic approach , 2002 .

[3]  Steven M. De Jong,et al.  Mapping the distribution of the main host for plague in a complex landscape in Kazakhstan: An object-based approach using SPOT-5 XS, Landsat 7 ETM+, SRTM and multiple Random Forests , 2013, Int. J. Appl. Earth Obs. Geoinformation.

[4]  M. Keeling,et al.  The effects of local spatial structure on epidemiological invasions , 1999, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[5]  J. Hancock,et al.  On the use of Ripley's K-function and its derivatives to analyze domain size. , 2009, Biophysical journal.

[6]  M. Keeling,et al.  Metapopulation dynamics of bubonic plague , 2000, Nature.

[7]  B. Grenfell,et al.  (Meta)population dynamics of infectious diseases. , 1997, Trends in ecology & evolution.

[8]  H. Akaike.  A new look at the statistical model identification , 1974 .

[9]  N. Stenseth,et al.  Emergence, spread, persistence and fade-out of sylvatic plague in Kazakhstan , 2011, Proceedings of the Royal Society B: Biological Sciences.

[10]  Thorsten Wiegand,et al.  Rings, circles, and null-models for point pattern analysis in ecology , 2004 .

[11]  Barbara J. Downes,et al.  Spatial point pattern analysis of available and exploited resources , 2004 .

[12]  Giles M. Foody,et al.  Investigating spatial structure in specific tree species in ancient semi-natural woodland using remote sensing and marked point pattern analysis , 2007 .

[13]  S. B. Pole,et al.  Predictive Thresholds for Plague in Kazakhstan , 2004, Science.

[14]  Jonas Reijniers,et al.  A curve of thresholds governs plague epizootics in Central Asia. , 2012, Ecology letters.

[15]  H. Leirs,et al.  The abundance threshold for plague as a critical percolation phenomenon , 2008, Nature.

[16]  K. Gage,et al.  Natural history of plague: perspectives from more than a century of research. , 2005, Annual review of entomology.

[17]  Margaret A. Oliver,et al.  A tutorial guide to geostatistics: Computing and modelling variograms and kriging , 2014 .

[18]  Boris V. Schmid,et al.  Local persistence and extinction of plague in a metapopulation of great gerbil burrows, Kazakhstan. , 2012, Epidemics.

[19]  N. P. Naumov,et al.  Ecology of Desert Rodents of the U.S.S.R. (Jerboas and Gerbils) , 1975 .

[20]  B M Bolker,et al.  Analytic models for the patchy spread of plant disease , 1999, Bulletin of mathematical biology.

[21]  B. Ripley.  The Second-Order Analysis of Stationary Point Processes , 1976 .

[22]  Jan A. Randall,et al.  Flexible social structure of a desert rodent, Rhombomys opimus: philopatry, kinship, and ecological constraints , 2005 .

[23]  Jonathan M. Chase,et al.  The metacommunity concept: a framework for multi-scale community ecology , 2004 .

[24]  J. Randall,et al.  Social correlates of stress in adult males of the great gerbil, Rhombomys opimus, in years of high and low population densities , 2003, Hormones and Behavior.

[25]  R. Eisen,et al.  Flea Diversity as an Element for Persistence of Plague Bacteria in an East African Plague Focus , 2012, PloS one.

[26]  M. Begon,et al.  Potential corridors and barriers for plague spread in central Asia , 2013, International Journal of Health Geographics.

[27]  Peter J. Diggle,et al.  Statistical analysis of spatial point patterns , 1983 .

[28]  J. H. Soper.  MAPPING THE DISTRIBUTION OF PLANTS BY MACHINE , 1964 .

[29]  M. Begon,et al.  Plague metapopulation dynamics in a natural reservoir: the burrow system as the unit of study , 2006, Epidemiology and Infection.

[30]  O. Bjørnstad,et al.  Travelling waves and spatial hierarchies in measles epidemics , 2001, Nature.

[31]  E. Korpimäki,et al.  DOES MOBILITY OR SEX OF VOLES AFFECT RISK OF PREDATION BY MAMMALIAN PREDATORS , 1998 .

[32]  W. Getz,et al.  Utility of R0 as a predictor of disease invasion in structured populations , 2007, Journal of The Royal Society Interface.

[33]  Adrian Baddeley,et al.  spatstat: An R Package for Analyzing Spatial Point Patterns , 2005 .

[34]  P. Diggle,et al.  Spatial point pattern analysis and its application in geographical epidemiology , 1996 .

[35]  Hans Heesterbeek,et al.  Divide and conquer? Persistence of infectious agents in spatial metapopulations of hosts. , 2011, Journal of theoretical biology.

[36]  M. Begon,et al.  Increased migration in host-pathogen metapopulations can cause host extinction. , 2012, Journal of theoretical biology.

[37]  P. Dixon.  Ripley's K Function , 2006 .