Evaluation of spike sorting and compression for digitally reconfigurable non-uniform quantization

A non-uniform quantization approach for neural signals is presented and evaluated in this paper. Depending on the local properties of the signal, the number of bits is varied dynamically: a high number of bits is used for the detected Action Potentials (APs) or Spikes, otherwise a lower number of bits is used. Therefore a simple threshold detector enables the window for high precision mode. The algorithm is tested on simulated and recorded data sets. As opposed to standard thresholding methods, it is shown that keeping information of the background activity permits to achieve better signal reconstruction during spike sorting. At the same time a non-uniform quantization allows significant compression rates, decreasing the power consumption for transmission. A digital implementation is proposed, offering area reduction and more flexibility as opposed to analog thresholding implementations. The technique is also compared to delta compression and found to achieve better results on noisy recorded data.

[1]  Lei Yao,et al.  Neural recording front-end IC using action potential detection and analog buffer with digital delay for data compression , 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

[2]  Joel W. Burdick,et al.  Spike detection using the continuous wavelet transform , 2005, IEEE Transactions on Biomedical Engineering.

[3]  Maurits Ortmanns,et al.  Evaluation study of compressed sensing for neural spike recordings , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[4]  Riccardo Rovatti,et al.  Low-power EEG monitor based on compressed sensing with compressed domain noise rejection , 2016, 2016 IEEE International Symposium on Circuits and Systems (ISCAS).

[5]  Mohamad Sawan,et al.  A Mixed-Signal Multichip Neural Recording Interface With Bandwidth Reduction , 2009, IEEE Transactions on Biomedical Circuits and Systems.

[6]  R.R. Harrison,et al.  A Low-Power Integrated Circuit for a Wireless 100-Electrode Neural Recording System , 2006, IEEE Journal of Solid-State Circuits.

[7]  Ueli Rutishauser,et al.  Online detection and sorting of extracellularly recorded action potentials in human medial temporal lobe recordings, in vivo , 2006, Journal of Neuroscience Methods.

[8]  Refet Firat Yazicioglu,et al.  An Efficient and Compact Compressed Sensing Microsystem for Implantable Neural Recordings , 2014, IEEE Transactions on Biomedical Circuits and Systems.