Ultradeep human phosphoproteome reveals a distinct regulatory nature of Tyr and Ser/Thr-based signaling.
暂无分享,去创建一个
M. Mann | J. Cox | J. Wiśniewski | S. Tyanova | K. Sharma | C. Schaab | Rochelle C. J. D’Souza | Stefka Tyanova
[1] 张剑,et al. Communication System , 2022, Wireless Power Transfer Technologies for Electric Vehicles.
[2] Ruedi Aebersold,et al. Mass spectrometry‐driven phosphoproteomics: patterning the systems biology mosaic , 2014, Wiley interdisciplinary reviews. Developmental biology.
[3] P. Bork,et al. Evolution and functional cross‐talk of protein post‐translational modifications , 2013, Molecular systems biology.
[4] M. Mann,et al. Status of Large-scale Analysis of Post-translational Modifications by Mass Spectrometry* , 2013, Molecular & Cellular Proteomics.
[5] S. Fields,et al. Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation , 2013, Nature Methods.
[6] David E. James,et al. Dynamic Adipocyte Phosphoproteome Reveals that Akt Directly Regulates mTORC2 , 2013, Cell metabolism.
[7] M. Mann,et al. A large synthetic peptide and phosphopeptide reference library for mass spectrometry–based proteomics , 2013, Nature Biotechnology.
[8] Tony Pawson,et al. Interaction Domains of Sos1/Grb2 Are Finely Tuned for Cooperative Control of Embryonic Stem Cell Fate , 2013, Cell.
[9] M. Peng,et al. Toward a comprehensive characterization of a human cancer cell phosphoproteome. , 2013, Journal of proteome research.
[10] Dmitrij Frishman,et al. Phosphorylation Variation during the Cell Cycle Scales with Structural Propensities of Proteins , 2013, PLoS Comput. Biol..
[11] Jürgen Cox,et al. Proteomic Analysis of Cellular Systems , 2013 .
[12] Jürgen Cox,et al. 1D and 2D annotation enrichment: a statistical method integrating quantitative proteomics with complementary high-throughput data , 2012, BMC Bioinformatics.
[13] Emmanuel D Levy,et al. Protein abundance is key to distinguish promiscuous from functional phosphorylation based on evolutionary information , 2012, Philosophical Transactions of the Royal Society B: Biological Sciences.
[14] Jürgen Cox,et al. Expert System for Computer-assisted Annotation of MS/MS Spectra* , 2012, Molecular & Cellular Proteomics.
[15] W. Lim,et al. Systematic Functional Prioritization of Protein Posttranslational Modifications , 2012, Cell.
[16] K. Lage,et al. Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues , 2012, Nature Communications.
[17] Richard J. Lavallee,et al. Optimized fast and sensitive acquisition methods for shotgun proteomics on a quadrupole orbitrap mass spectrometer. , 2012, Journal of proteome research.
[18] Matthias Mann,et al. Analysis of High Accuracy, Quantitative Proteomics Data in the MaxQB Database , 2012, Molecular & Cellular Proteomics.
[19] Bin Zhang,et al. PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse , 2011, Nucleic Acids Res..
[20] S. Gerber,et al. Rapid and reproducible single-stage phosphopeptide enrichment of complex peptide mixtures: application to general and phosphotyrosine-specific phosphoproteomics experiments. , 2011, Analytical chemistry.
[21] Holger Conzelmann,et al. Rapid phospho-turnover by receptor tyrosine kinases impacts downstream signaling and drug binding. , 2011, Molecular cell.
[22] M. Mann,et al. Large-scale phosphosite quantification in tissues by a spike-in SILAC method , 2011, Nature Methods.
[23] Albert J R Heck,et al. Enhancing the Identification of Phosphopeptides from Putative Basophilic Kinase Substrates Using Ti (IV) Based IMAC Enrichment* , 2011, Molecular & Cellular Proteomics.
[24] Edward L. Huttlin,et al. A large-scale method to measure absolute protein phosphorylation stoichiometries , 2011, Nature Methods.
[25] M. Mann,et al. Mass Spectrometry-based Proteomics Using Q Exactive, a High-performance Benchtop Quadrupole Orbitrap Mass Spectrometer* , 2011, Molecular & Cellular Proteomics.
[26] M. Mann,et al. Andromeda: a peptide search engine integrated into the MaxQuant environment. , 2011, Journal of proteome research.
[27] M. Mann,et al. Feasibility of large-scale phosphoproteomics with higher energy collisional dissociation fragmentation. , 2010, Journal of proteome research.
[28] Tony Pawson,et al. Phosphotyrosine Signaling: Evolving a New Cellular Communication System , 2010, Cell.
[29] M. Mann,et al. Decoding signalling networks by mass spectrometry-based proteomics , 2010, Nature Reviews Molecular Cell Biology.
[30] S. Brunak,et al. Quantitative Phosphoproteomics Reveals Widespread Full Phosphorylation Site Occupancy During Mitosis , 2010, Science Signaling.
[31] Matthias Mann,et al. Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteome. , 2009, Journal of proteome research.
[32] S. Lemeer,et al. The phosphoproteomics data explosion. , 2009, Current opinion in chemical biology.
[33] B. Snel,et al. In-depth Qualitative and Quantitative Profiling of Tyrosine Phosphorylation Using a Combination of Phosphopeptide Immunoaffinity Purification and Stable Isotope Dimethyl Labeling* , 2009, Molecular & Cellular Proteomics.
[34] G. Superti-Furga,et al. Target profiling of small molecules by chemical proteomics. , 2009, Nature chemical biology.
[35] M. Mann,et al. Universal sample preparation method for proteome analysis , 2009, Nature Methods.
[36] T. Hunter. Tyrosine phosphorylation: thirty years and counting. , 2009, Current opinion in cell biology.
[37] C. Eyers. Universal sample preparation method for proteome analysis , 2009 .
[38] N. Gray,et al. Targeting cancer with small molecule kinase inhibitors , 2009, Nature Reviews Cancer.
[39] M. Mann,et al. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification , 2008, Nature Biotechnology.
[40] T. Hunter. The age of crosstalk: phosphorylation, ubiquitination, and beyond. , 2007, Molecular cell.
[41] J. Ferrell,et al. Mechanisms of specificity in protein phosphorylation , 2007, Nature Reviews Molecular Cell Biology.
[42] M. Mann,et al. Global, In Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks , 2006, Cell.
[43] G. Johnson,et al. EGFR kinase possesses a broad specificity for ErbB phosphorylation sites, and ligand increases catalytic-centre activity without affecting substrate binding affinity. , 2005, The Biochemical journal.
[44] L. Scapozza,et al. Unique substrate specificity of anaplastic lymphoma kinase (ALK): development of phosphoacceptor peptides for the assay of ALK activity. , 2005, Biochemistry.
[45] David O. Morgan,et al. Cyclin specificity in the phosphorylation of cyclin-dependent kinase substrates , 2005, Nature.
[46] J. Rush,et al. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells , 2005, Nature Biotechnology.
[47] Bernard F. Buxton,et al. The DISOPRED server for the prediction of protein disorder , 2004, Bioinform..
[48] L. Iakoucheva,et al. The importance of intrinsic disorder for protein phosphorylation. , 2004, Nucleic acids research.
[49] K. Shokat,et al. Targets of the cyclin-dependent kinase Cdk1 , 2003, Nature.
[50] M. Mann,et al. Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics. , 2003, Analytical chemistry.
[51] Mark Gerstein,et al. Comprehensive analysis of amino acid and nucleotide composition in eukaryotic genomes, comparing genes and pseudogenes. , 2002, Nucleic acids research.
[52] P. Cohen,et al. The regulation of protein function by multisite phosphorylation--a 25 year update. , 2000, Trends in biochemical sciences.
[53] L. Pinna,et al. How do protein kinases recognize their substrates? , 1996, Biochimica et biophysica acta.
[54] P. Vaglio,et al. Protein Kinase CK2 Mutants Defective in Substrate Recognition , 1996, The Journal of Biological Chemistry.
[55] T Pawson,et al. A noncatalytic domain conserved among cytoplasmic protein-tyrosine kinases modifies the kinase function and transforming activity of Fujinami sarcoma virus P130gag-fps , 1986, Molecular and cellular biology.
[56] T. Hunter,et al. Transforming gene product of Rous sarcoma virus phosphorylates tyrosine , 1980, Proceedings of the National Academy of Sciences.