Integrative epigenomic mapping defines four main chromatin states in Arabidopsis
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M. Martin-Magniette | Ikhlak Ahmed | S. Aubourg | A. Schnittger | S. Robin | C. Bowler | V. Brunaud | V. Colot | M. Caboche | D. Bouyer | Sandra Dérozier | S. Drevensek | Evelyne Duvernois-Berthet | F. Roudier | A. Sarazin | S. Cortijo | Caroline Bérard | T. Mary-Huard | E. Caillieux | Laurène Giraut | B. Després | Liza Al-Shikhley | Fredy Barneche
[1] Angela N. Brooks,et al. Identification of functional elements and regulatory circuits by Drosophila modENCODE , 2011 .
[2] S. Jacobsen,et al. Epigenetic modifications in plants: an evolutionary perspective. , 2011, Current opinion in plant biology.
[3] Arp Schnittger,et al. Polycomb Repressive Complex 2 Controls the Embryo-to-Seedling Phase Transition , 2011, PLoS genetics.
[4] A. Rechtsteiner,et al. Broad chromosomal domains of histone modification patterns in C. elegans. , 2011, Genome research.
[5] Jacob D. Jaffe,et al. Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin. , 2011, Genome research.
[6] Raymond K. Auerbach,et al. Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project , 2010, Science.
[7] Lovelace J. Luquette,et al. Comprehensive analysis of the chromatin landscape in Drosophila , 2010, Nature.
[8] Salvatore Spicuglia,et al. A unique H3K4me2 profile marks tissue-specific gene regulation. , 2010, Genome research.
[9] Guillaume J. Filion,et al. Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells , 2010, Cell.
[10] Lars Hennig,et al. Regulation of cell identity by plant Polycomb and trithorax group proteins. , 2010, Current opinion in genetics & development.
[11] A. Berr,et al. Arabidopsis SET DOMAIN GROUP2 Is Required for H3K4 Trimethylation and Is Crucial for Both Sporophyte and Gametophyte Development[C][W] , 2010, Plant Cell.
[12] Edwin Smith,et al. The Language of Histone Crosstalk , 2010, Cell.
[13] Yannick Jacob,et al. Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases , 2010, Nature.
[14] Manolis Kellis,et al. Discovery and characterization of chromatin states for systematic annotation of the human genome , 2010, Nature Biotechnology.
[15] C. Luo,et al. ANCORP: a high-resolution approach that generates distinct chromatin state models from multiple genome-wide datasets. , 2010, The Plant journal : for cell and molecular biology.
[16] Matthew W. Vaughn,et al. Arabidopsis thaliana Chromosome 4 Replicates in Two Phases That Correlate with Chromatin State , 2010, PLoS genetics.
[17] M. Pellegrini,et al. Relationship between nucleosome positioning and DNA methylation , 2010, Nature.
[18] B. Blencowe,et al. Regulation of Alternative Splicing by Histone Modifications , 2010, Science.
[19] Xing Wang Deng,et al. Dynamic Landscapes of Four Histone Modifications during Deetiolation in Arabidopsis[W] , 2009, The Plant Cell Online.
[20] V. Colot,et al. Chromatin indexing in Arabidopsis: an epigenomic tale of tails and more. , 2009, Trends in genetics : TIG.
[21] Bing Ren,et al. Discovery and Annotation of Functional Chromatin Signatures in the Human Genome , 2009, PLoS Comput. Biol..
[22] Mark Johnston,et al. Linking cell cycle to histone modifications: SBF and H2B monoubiquitination machinery and cell-cycle regulation of H3K79 dimethylation. , 2009, Molecular cell.
[23] M. Pellegrini,et al. Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana , 2009, Genome Biology.
[24] M. Pellegrini,et al. ATXR5 and ATXR6 are novel H3K27 monomethyltransferases required for chromatin structure and gene silencing , 2009, Nature Structural &Molecular Biology.
[25] Howard Y. Chang,et al. Genome-wide views of chromatin structure. , 2009, Annual review of biochemistry.
[26] Dustin E. Schones,et al. Characterization of human epigenomes. , 2009, Current opinion in genetics & development.
[27] Danhua Jiang,et al. Repression of the floral transition via histone H2B monoubiquitination. , 2009, The Plant journal : for cell and molecular biology.
[28] J. Ahringer,et al. Differential chromatin marking of introns and expressed exons by H3K36me3 , 2008, Nature Genetics.
[29] Robert J. Schmitz,et al. Histone H2B Deubiquitination Is Required for Transcriptional Activation of FLOWERING LOCUS C and for Proper Control of Flowering in Arabidopsis1[C][W][OA] , 2008, Plant Physiology.
[30] Matthew W Vaughn,et al. Epigenomic Consequences of Immortalized Plant Cell Suspension Culture , 2008, PLoS biology.
[31] Jerry L. Workman,et al. Crosstalk among Histone Modifications , 2008, Cell.
[32] S. Henikoff,et al. Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks , 2008, Nature.
[33] Danhua Jiang,et al. Repression of FLOWERING LOCUS C and FLOWERING LOCUS T by the Arabidopsis Polycomb Repressive Complex 2 Components , 2008, PloS one.
[34] Ligeng Ma,et al. Histone H2B Monoubiquitination in the Chromatin of FLOWERING LOCUS C Regulates Flowering Time in Arabidopsis[W] , 2008, The Plant Cell Online.
[35] Danny Reinberg,et al. Is there a code embedded in proteins that is based on post-translational modifications? , 2008, Nature Reviews Molecular Cell Biology.
[36] M. Pellegrini,et al. Genome-Wide Association of Histone H3 Lysine Nine Methylation with CHG DNA Methylation in Arabidopsis thaliana , 2008, PloS one.
[37] Tristan Mary-Huard,et al. ChIPmix: mixture model of regressions for two-color ChIP-chip analysis , 2008, ECCB.
[38] Sookyung Oh,et al. Genic and Global Functions for Paf1C in Chromatin Modification and Gene Expression in Arabidopsis , 2008, PLoS genetics.
[39] Michael Q. Zhang,et al. Combinatorial patterns of histone acetylations and methylations in the human genome , 2008, Nature Genetics.
[40] J. Tyler,et al. Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation , 2008, Proceedings of the National Academy of Sciences.
[41] R. Lister,et al. Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis , 2008, Cell.
[42] Vikki M. Weake,et al. Histone ubiquitination: triggering gene activity. , 2008, Molecular cell.
[43] E. Segal,et al. Monoubiquitinated H2B is associated with the transcribed region of highly expressed genes in human cells , 2008, Nature Cell Biology.
[44] S. Nelson,et al. Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning , 2008, Nature.
[45] Frédérique Bitton,et al. CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform , 2007, Nucleic Acids Res..
[46] R. Doerge,et al. Epigenetic Natural Variation in Arabidopsis thaliana , 2007, PLoS biology.
[47] Jianjun Zhu,et al. Control of DNA methylation and heterochromatic silencing by histone H2B deubiquitination , 2007, Nature.
[48] S. Berger. The complex language of chromatin regulation during transcription , 2007, Nature.
[49] Crisanto Gutierrez,et al. A chromatin link that couples cell division to root epidermis patterning in Arabidopsis , 2007, Nature.
[50] Matteo Pellegrini,et al. Whole-Genome Analysis of Histone H3 Lysine 27 Trimethylation in Arabidopsis , 2007, PLoS biology.
[51] Vincent Colot,et al. Arabidopsis TFL2/LHP1 Specifically Associates with Genes Marked by Trimethylation of Histone H3 Lysine 27 , 2007, PLoS genetics.
[52] T. Kouzarides. Chromatin Modifications and Their Function , 2007, Cell.
[53] Christopher R. Vakoc,et al. Profile of Histone Lysine Methylation across Transcribed Mammalian Chromatin , 2006, Molecular and Cellular Biology.
[54] M. Pellegrini,et al. Genome-wide High-Resolution Mapping and Functional Analysis of DNA Methylation in Arabidopsis , 2006, Cell.
[55] Henriette O'Geen,et al. Suz12 binds to silenced regions of the genome in a cell-type-specific manner. , 2006, Genome research.
[56] Andreas Houben,et al. Chromosomal histone modification patterns--from conservation to diversity. , 2006, Trends in plant science.
[57] N. Friedman,et al. Single-Nucleosome Mapping of Histone Modifications in S. cerevisiae , 2005, PLoS biology.
[58] G. Blobel,et al. Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatin. , 2005, Molecular cell.
[59] Stefan R. Henz,et al. A gene expression map of Arabidopsis thaliana development , 2005, Nature Genetics.
[60] Vincent Colot,et al. Profiling DNA methylation patterns using genomic tiling microarrays , 2005, Nature Methods.
[61] Michael Black,et al. Role of transposable elements in heterochromatin and epigenetic control , 2004, Nature.
[62] Lianna Johnson,et al. Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana , 2004, Chromosoma.
[63] C. Allis,et al. Translating the Histone Code , 2001, Science.
[64] C. Allis,et al. The language of covalent histone modifications , 2000, Nature.
[65] B. Bernstein,et al. Charting histone modifications and the functional organization of mammalian genomes , 2011, Nature Reviews Genetics.
[66] Vincent Colot,et al. Arabidopsis TFL 2 / LHP 1 Specifically Associates with Genes Marked by Trimethylation of Histone H 3 Lysine 27 , 2007 .
[67] S. Henikoff,et al. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription , 2007, Nature Genetics.
[68] Sylvain Duchêne,et al. FLAGdb++: a database for the functional analysis of the Arabidopsis genome , 2004, Nucleic Acids Res..
[69] Lianna Johnson,et al. Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications. , 2004, Nucleic acids research.