Isolation and characterisation of Vibrio cholerae from fish examined postmortem at ZSL London Zoo between 2014 and 2018

Background When suspect Vibrio cholerae were cultured from fish at ZSL London Zoo, investigations were carried out to determine whether they were possible causes of cholera. Methods Bacterial culture was carried out on fish examined postmortem and colonies were identified using standard techniques including the API 20NE biochemical test kits. Suspect isolates were submitted to the Public Health England laboratory for additional testing. Separately, a number of fish were submitted for routine histopathology. Results On 13 occasions between 2014 and 2018, suspected V cholerae were cultured from individuals of eight different freshwater fish species. Archived cultures for eight of these (from six different fish species) were investigated and seven isolates (from five fish species) were confirmed as V cholerae, but all were non-O1, non-O139 strains. Whole-genome sequencing showed that the five fish species had unique V cholerae multilocus sequence types (three isolates from Aphanius danfordii were identical), all of which were genetically distant from human isolates. Conclusions There was no evidence that these isolates could cause cholera. Histopathological changes consistent with vibriosis were seen in several fish, suggesting that V cholerae were causing the disease, but there were also concurrent infections or predisposing stress factors.

[1]  T. Dallman,et al.  Evaluation of whole genome sequencing for the identification and typing of Vibrio cholerae , 2018, bioRxiv.

[2]  Daniel J. Blankenberg,et al.  The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update , 2018, Nucleic Acids Res..

[3]  C. Jenkins,et al.  A real-time multiplex PCR for the identification and typing of Vibrio cholerae. , 2017, Diagnostic microbiology and infectious disease.

[4]  T. Dallman,et al.  Whole-Genome Sequencing for National Surveillance of Shigella flexneri , 2017, Front. Microbiol..

[5]  Y. Boucher,et al.  Emergence, ecology and dispersal of the pandemic generating Vibrio cholerae lineage. , 2017, International microbiology : the official journal of the Spanish Society for Microbiology.

[6]  G. Katzir,et al.  Great cormorants (Phalacrocorax carbo) as potential vectors for the dispersal of Vibrio cholerae , 2017, Scientific Reports.

[7]  I. Izhaki,et al.  Fish as Hosts of Vibrio cholerae , 2017, Front. Microbiol..

[8]  P. Ashton,et al.  MOST: a modified MLST typing tool based on short read sequencing , 2016, PeerJ.

[9]  J. Řehulka,et al.  Vibrio cholerae non-O1/non-O139 infection in fish in the Czech Republic. , 2016 .

[10]  Claire Jenkins,et al.  Identification of Salmonella for public health surveillance using whole genome sequencing , 2016, PeerJ.

[11]  Anna Lena Lopez,et al.  Updated Global Burden of Cholera in Endemic Countries , 2015, PLoS neglected tropical diseases.

[12]  J. Morris,et al.  Distribution of Virulence-Associated Genes and Genetic Relationships in Non-O1/O139 Vibrio cholerae Aquatic Isolates from China , 2014, Applied and Environmental Microbiology.

[13]  J. Withey,et al.  Zebrafish as a Natural Host Model for Vibrio cholerae Colonization and Transmission , 2013, Applied and Environmental Microbiology.

[14]  R. Colwell,et al.  Distribution of Virulence Genes in Clinical and Environmental Vibrio cholerae Strains in Bangladesh , 2013, Applied and Environmental Microbiology.

[15]  G. Nair,et al.  Population Structure and Evolution of Non-O1/Non-O139 Vibrio cholerae by Multilocus Sequence Typing , 2013, PloS one.

[16]  Larry R. Beuchat,et al.  Food microbiology : fundamentals and frontiers , 2013 .

[17]  L. Amaral-Zettler,et al.  Microbial Diversity and Potential Pathogens in Ornamental Fish Aquarium Water , 2012, PloS one.

[18]  Sergey I. Nikolenko,et al.  SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing , 2012, J. Comput. Biol..

[19]  I. Izhaki,et al.  Fish as Reservoirs and Vectors of Vibrio cholerae , 2010, PloS one.

[20]  I. Izhaki,et al.  Waterfowl—The Missing Link in Epidemic and Pandemic Cholera Dissemination? , 2008, PLoS pathogens.

[21]  R. Colwell,et al.  Global impact of Vibrio cholerae interactions with chitin. , 2008, Environmental microbiology.

[22]  J. Morris Cholera and Other Vibrioses , 2008 .

[23]  Y. Kashi,et al.  Vibrio cholerae Hemagglutinin/Protease Degrades Chironomid Egg Masses , 2003, Applied and Environmental Microbiology.

[24]  J. Morris,et al.  Evidence for the Emergence of Non-O1 and Non-O139 Vibrio cholerae Strains with Pathogenic Potential by Exchange of O-Antigen Biosynthesis Regions , 2002, Infection and Immunity.

[25]  E. Noga Fish Disease: Diagnosis and Treatment , 2000 .

[26]  E. Boedeker,et al.  A Vibrio cholerae pathogenicity island associated with epidemic and pandemic strains. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[27]  Matthew K. Waldor,et al.  Lysogenic Conversion by a Filamentous Phage Encoding Cholera Toxin , 1996, Science.

[28]  A. H-Kittikun,et al.  Prevalence of vibrio cholerae and salmonella in a major shrimp production area in Thailand. , 1995, International journal of food microbiology.

[29]  Y. Takeda,et al.  Spread of Vibrio cholerae O139 Bengal in India. , 1994, The Journal of infectious diseases.

[30]  P. Quinn Clinical veterinary microbiology , 1994 .

[31]  R. Athersuch,et al.  Isolation of Vibrio cholerae non-01 from a Somerset farmworker and his tropical fish tank. , 1990, The Journal of infection.

[32]  G. T. Strickland Hunter's Tropical medicine , 1987 .