Isothermal digital detection of microRNAs using background-free molecular circuit
暂无分享,去创建一个
Yannick Rondelez | Valérie Taly | Guillaume Gines | Roberta Menezes | Y. Rondelez | V. Taly | Kaori Nara | Anne-Sophie Kirstetter | G. Gines | Roberta Menezes | K. Nara | Anne-Sophie Kirstetter
[1] H. Pei,et al. DNA‐Based Chemical Reaction Networks , 2019, Chembiochem : a European journal of chemical biology.
[2] Jianhui Jiang,et al. A ligation-based loop-mediated isothermal amplification (ligation-LAMP) strategy for highly selective microRNA detection. , 2016, Chemical communications.
[3] Erik Winfree,et al. Leakless DNA Strand Displacement Systems , 2015, DNA.
[4] Arend Hintze,et al. Sequence dependence of isothermal DNA amplification via EXPAR , 2012, Nucleic acids research.
[5] Jennifer E. Padilla,et al. Availability: A Metric for Nucleic Acid Strand Displacement Systems , 2016, ACS synthetic biology.
[6] Jaber Aslanzadeh,et al. Preventing PCR amplification carryover contamination in a clinical laboratory. , 2004, Annals of clinical and laboratory science.
[7] Harry M. T. Choi,et al. Programming biomolecular self-assembly pathways , 2008, Nature.
[8] A. Estevez-Torres,et al. rEXPAR: An Isothermal Amplification Scheme That Is Robust to Autocatalytic Parasites , 2019, bioRxiv.
[9] Takahiro Ochiya,et al. Circulating microRNA in body fluid: a new potential biomarker for cancer diagnosis and prognosis , 2010, Cancer science.
[10] M. Garofalo,et al. Role of microRNAs in chemoresistance. , 2015, Annals of translational medicine.
[11] K. Livak,et al. Real-time quantification of microRNAs by stem–loop RT–PCR , 2005, Nucleic acids research.
[12] Tania Nolan,et al. Variability of the reverse transcription step: practical implications. , 2015, Clinical chemistry.
[13] E. Kool,et al. Amplified microRNA detection by templated chemistry , 2012, Nucleic acids research.
[14] Bingling Li,et al. Mismatches improve the performance of strand-displacement nucleic Acid circuits. , 2014, Angewandte Chemie.
[15] M. Yamamura,et al. Leak-free million-fold DNA amplification with locked nucleic acid and targeted hybridization in one pot. , 2019, Organic & biomolecular chemistry.
[16] F. Gourronc,et al. Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis , 2012 .
[17] Christopher M. Hindson,et al. Absolute quantification by droplet digital PCR versus analog real-time PCR , 2013, Nature Methods.
[18] Subrata Sen,et al. MicroRNA as Biomarkers and Diagnostics , 2016, Journal of cellular physiology.
[19] G. Calin,et al. MicroRNA history: discovery, recent applications, and next frontiers. , 2011, Mutation research.
[20] J. Ju,et al. Circulating microRNA Testing for the Early Diagnosis and Follow-up of Colorectal Cancer Patients , 2014, Molecular Diagnosis & Therapy.
[21] T. Fujii,et al. Dynamic DNA-toolbox reaction circuits: a walkthrough. , 2014, Methods.
[22] G. Seelig,et al. Enzyme-Free Nucleic Acid Logic Circuits , 2022 .
[23] R. Masui,et al. Overexpression, purification and characterization of RecJ protein from Thermus thermophilus HB8 and its core domain. , 2001, Nucleic acids research.
[24] Angelika Niemz,et al. Specific versus nonspecific isothermal DNA amplification through thermophilic polymerase and nicking enzyme activities. , 2008, Biochemistry.
[25] Vladimir Benes,et al. Expression profiling of microRNA using real-time quantitative PCR, how to use it and what is available. , 2010, Methods.
[26] Enrico Gratton,et al. Digital quantification of miRNA directly in plasma using integrated comprehensive droplet digital detection. , 2015, Lab on a chip.
[27] David J. Galas,et al. Isothermal reactions for the amplification of oligonucleotides , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[28] D. Walt,et al. Digital direct detection of microRNAs using single molecule arrays , 2017, Nucleic acids research.
[29] Zong Dai,et al. Asymmetric exponential amplification reaction on a toehold/biotin featured template: an ultrasensitive and specific strategy for isothermal microRNAs analysis , 2016, Nucleic acids research.
[30] Y. Sakai,et al. Programming an in vitro DNA oscillator using a molecular networking strategy , 2011, Molecular systems biology.
[31] Thean-Hock Tang,et al. Biases in small RNA deep sequencing data , 2013, Nucleic acids research.
[32] Teruo Fujii,et al. Nucleic acids for the rational design of reaction circuits. , 2013, Current opinion in biotechnology.
[33] Jennifer L. Ong,et al. Directed evolution of polymerase function by compartmentalized self-replication , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[34] Zongbing Li,et al. Sensitive detection of miRNA by using hybridization chain reaction coupled with positively charged gold nanoparticles , 2016, Scientific Reports.
[35] Lulu Qian,et al. Supporting Online Material Materials and Methods Figs. S1 to S6 Tables S1 to S4 References and Notes Scaling up Digital Circuit Computation with Dna Strand Displacement Cascades , 2022 .
[36] Bruce R McCord,et al. A Study of PCR Inhibition Mechanisms Using Real Time PCR *,† , 2010, Journal of forensic sciences.
[37] M. Trau,et al. Comprehensive evaluation of molecular enhancers of the isothermal exponential amplification reaction , 2016, Scientific Reports.
[38] Teruo Fujii,et al. Boosting functionality of synthetic DNA circuits with tailored deactivation , 2016, Nature Communications.
[39] Lili Wang,et al. Steps to achieve quantitative measurements of microRNA using two step droplet digital PCR , 2017, PloS one.
[40] C. Fan,et al. Isothermal Amplification of Nucleic Acids. , 2015, Chemical reviews.
[41] D. Noonan,et al. A comparison between quantitative PCR and droplet digital PCR technologies for circulating microRNA quantification in human lung cancer , 2016, BMC Biotechnology.
[42] X Chris Le,et al. Reduction of Background Generated from Template-Template Hybridizations in the Exponential Amplification Reaction. , 2018, Analytical chemistry.
[43] Ugo Pastorino,et al. Novel method to detect microRNAs using chip-based QuantStudio 3D digital PCR , 2015, BMC Genomics.
[44] Yongqiang Cheng,et al. Ultrasensitive detection of microRNAs by exponential isothermal amplification. , 2010, Angewandte Chemie.
[45] Guohua Zhou,et al. Exponential amplification of DNA with very low background using graphene oxide and single-stranded binding protein to suppress non-specific amplification , 2015, Microchimica Acta.
[46] Zhengping Li,et al. Precise Quantitation of MicroRNA in a Single Cell with Droplet Digital PCR Based on Ligation Reaction. , 2016, Analytical chemistry.