Covid19Risk.ai: An Open Source Repository and Online Calculator of Prediction Models for Early Diagnosis and Prognosis of Covid-19

Background: The current pandemic has led to a proliferation of predictive models being developed to address various aspects of COVID-19 patient care. We aimed to develop an online platform that would serve as an open source repository for a curated subset of such models, and provide a simple interface for included models to allow for online calculation. This platform would support doctors during decision-making regarding diagnoses, prognoses, and follow-up of COVID-19 patients, expediting the models’ transition from research to clinical practice. Methods: In this pilot study, we performed a literature search in the PubMed and WHO databases to find suitable models for implementation on our platform. All selected models were publicly available (peer reviewed publications or open source repository) and had been validated (TRIPOD type 3 or 2b). We created a method for obtaining the regression coefficients if only the nomogram was available in the original publication. All predictive models were transcribed on a practical graphical user interface using PHP 8.0.0, and were published online together with supporting documentation and links to the associated articles. Results: The open source website currently incorporates nine models from six different research groups, evaluated on datasets from different countries. The website will continue to be populated with other models related to COVID-19 prediction as these become available. This dynamic platform allows COVID-19 researchers to contact us to have their model curated and included on our website, thereby increasing the reach and real-world impact of their work. Conclusion: We have successfully demonstrated in this pilot study that our website provides an inclusive platform for predictive models related to COVID-19. It enables doctors to supplement their judgment with patient-specific predictions from externally validated models in a user-friendly format. Additionally, this platform supports researchers in showcasing their work, which will increase the visibility and use of their models.

[1]  M. Pennell,et al.  Acceptability of a COVID-19 vaccine among adults in the United States: How many people would get vaccinated? , 2020, Vaccine.

[2]  G. Heinze,et al.  Prediction models for diagnosis and prognosis of covid-19: systematic review and critical appraisal , 2020, BMJ.

[3]  M. Kattan,et al.  Development and validation of a model for individualized prediction of hospitalization risk in 4,536 patients with COVID-19 , 2020, PloS one.

[4]  R. Bruno,et al.  Dynamic angiopoietin-2 assessment predicts survival and chronic course in hospitalized patients with COVID-19 , 2021, Blood Advances.

[5]  Towards intervention development to increase the uptake of COVID-19 vaccination among those at high risk: Outlining evidence-based and theoretically informed future intervention content. , 2020, British journal of health psychology.

[6]  P. Lambin,et al.  Development of a clinical decision support system for severity risk prediction and triage of COVID-19 patients at hospital admission: an international multicentre study , 2020, European Respiratory Journal.

[7]  Yaling Shi,et al.  A Tool to Early Predict Severe Corona Virus Disease 2019 (COVID-19) : A Multicenter Study using the Risk Nomogram in Wuhan and Guangdong, China , 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[8]  Mickaël Ohana,et al.  High risk of thrombosis in patients with severe SARS-CoV-2 infection: a multicenter prospective cohort study , 2020, Intensive Care Medicine.

[9]  Zhiyi Wang,et al.  Development and Validation of a Diagnostic Nomogram to Predict COVID-19 Pneumonia , 2020, medRxiv.

[10]  Muhammad Talal Ibrahim,et al.  Exploring the Potential of Artificial Intelligence and Machine Learning to Combat COVID-19 and Existing Opportunities for LMIC: A Scoping Review , 2020, Journal of primary care & community health.

[11]  M. Piepoli,et al.  A Machine Learning Approach for Mortality Prediction in COVID-19 Pneumonia: Development and Evaluation of the Piacenza Score , 2021, Journal of Medical Internet Research.

[12]  G. Collins,et al.  Transparent reporting of a multivariable prediction model for individual prognosis or diagnosis (TRIPOD): the TRIPOD Statement , 2015, BMC Medicine.

[13]  E. Emanuel,et al.  Fairly Prioritizing Groups for Access to COVID-19 Vaccines. , 2020, JAMA.

[14]  Yuan-qiang Lu,et al.  COVID-19 early warning score: a multi-parameter screening tool to identify highly suspected patients , 2020, medRxiv.

[15]  P. Lambin,et al.  Decision Support Systems in Prostate Cancer Treatment: An Overview , 2019, BioMed research international.