Development of a self-priming PDMS/paper hybrid microfluidic chip using mixed-dye-loaded loop-mediated isothermal amplification assay for multiplex foodborne pathogens detection.

Foodborne pathogen is the primary cause of foodborne disease outbreak. Given its great damage, a sensitive, simple and rapid detection method is demanded. Herein, we described a self-priming polydimethylsiloxane (PDMS)/paper hybrid microfluidic chip, termed SPH chip, with mixed-dye-loaded loop-mediated isothermal amplification (LAMP) for multiplex foodborne pathogens detection. Staphylococcus aureus (SA) and Vibrio parahaemolyticus (VP) were chosen to verify the novel method. Compared to other similar detection devices, the SPH chip required easier fabrication process, less operation steps and lower cost. Additionally, the reaction result, especially for the weak-positive reaction, could be judged more accurately and conveniently due to the use of mixed-dye. Without pre-enrichment of bacteria in the food contaminated sample, the limit of detection (LOD) reached down to 1000 CFU mL-1 with high specific. Additionally, for fully exploiting the potential of SPH chip, a conceptual eight-channel detection chip was also developed. Overall, the reliable and excellent result demonstrated that the novel method had great potential to be applied in the wider range of pathogens detection or disease diagnose, especially in some resource-limited area.

[1]  Tae Seok Seo,et al.  Fully automated and colorimetric foodborne pathogen detection on an integrated centrifugal microfluidic device. , 2016, Lab on a chip.

[2]  S. Sudhaharan,et al.  Evaluation of LAMP Assay Using Phenotypic Tests and Conventional PCR for Detection of nuc and mecA genes Among Clinical Isolates of Staphylococcus spp. , 2015, Journal of clinical and diagnostic research : JCDR.

[3]  T. Q. Hung,et al.  A lab-on-a-chip system with integrated sample preparation and loop-mediated isothermal amplification for rapid and quantitative detection of Salmonella spp. in food samples. , 2015, Lab on a chip.

[4]  Y. Mori,et al.  Analytical sensitivity and specificity of a loop-mediated isothermal amplification (LAMP) kit prototype for detection of Trypanosoma cruzi DNA in human blood samples , 2017, PLoS neglected tropical diseases.

[5]  Jiadong Huang,et al.  Detection and identification of Vibrio parahaemolyticus by multiplex PCR and DNA-DNA hybridization on a microarray. , 2011, Journal of genetics and genomics = Yi chuan xue bao.

[6]  H. Ishikawa,et al.  Development of multiplex loop-mediated isothermal amplification assays to detect medically important yeasts in dairy products. , 2014, FEMS microbiology letters.

[7]  O. Brakstad,et al.  Detection of Staphylococcus aureus by polymerase chain reaction amplification of the nuc gene , 1992, Journal of clinical microbiology.

[8]  Juan Li,et al.  Rapid and Quantitative Detection of Vibrio parahemolyticus by the Mixed-Dye-Based Loop-Mediated Isothermal Amplification Assay on a Self-Priming Compartmentalization Microfluidic Chip. , 2017, Journal of agricultural and food chemistry.

[9]  A. DePaola,et al.  Evaluation of alkaline phosphatase‐ and digoxigenin‐labelled probes for detection of the thermolabile hemolysin (tlh) gene of Vibrio parahaemolyticus , 1999, Letters in applied microbiology.

[10]  XiuJun Li,et al.  A PDMS/paper/glass hybrid microfluidic biochip integrated with aptamer-functionalized graphene oxide nano-biosensors for one-step multiplexed pathogen detection. , 2013, Lab on a chip.

[11]  George M. Whitesides,et al.  Sliding-strip microfluidic device enables ELISA on paper , 2018, Biosensors & bioelectronics.

[12]  Dexin Zeng,et al.  Advances and Challenges in Viability Detection of Foodborne Pathogens , 2016, Front. Microbiol..

[13]  Zhiyong Guo,et al.  A label-free multi-functionalized graphene oxide based electrochemiluminscence immunosensor for ultrasensitive and rapid detection of Vibrio parahaemolyticus in seawater and seafood. , 2016, Talanta.

[14]  J. Martínez-Urtaza,et al.  Molecular characterizations of Vibrio parahaemolyticus in seafood from the Black Sea, Turkey , 2016, Letters in applied microbiology.

[15]  Lin Qiu,et al.  Single cell digital polymerase chain reaction on self-priming compartmentalization chip. , 2017, Biomicrofluidics.

[16]  Lin Qiu,et al.  A scalable self-priming fractal branching microchannel net chip for digital PCR. , 2017, Lab on a chip.

[17]  Qiangyuan Zhu,et al.  Mixed-Dye-Based Label-Free and Sensitive Dual Fluorescence for the Product Detection of Nucleic Acid Isothermal Multiple-Self-Matching-Initiated Amplification. , 2015, Analytical chemistry.

[18]  Kiyoshi Inoue,et al.  Development of a loop-mediated Isothermal amplification assay for sensitive and rapid detection of Vibrio parahaemolyticus , 2008, BMC Microbiology.

[19]  Feng Xu,et al.  Multiplexed instrument-free meningitis diagnosis on a polymer/paper hybrid microfluidic biochip. , 2017, Biosensors & bioelectronics.

[20]  Fatimah Ibrahim,et al.  A Portable Automatic Endpoint Detection System for Amplicons of Loop Mediated Isothermal Amplification on Microfluidic Compact Disk Platform , 2015, Sensors.

[21]  Tae Seok Seo,et al.  Centrifugal loop-mediated isothermal amplification microdevice for rapid, multiplex and colorimetric foodborne pathogen detection. , 2016, Biosensors & bioelectronics.

[22]  Li Zhang,et al.  Loop-mediated isothermal amplification (LAMP): A novel rapid detection platform for pathogens. , 2017, Microbial pathogenesis.

[23]  M. Dou,et al.  A Versatile PDMS/Paper Hybrid Microfluidic Platform for Sensitive Infectious Disease Diagnosis , 2014, Analytical chemistry.

[24]  B. M. Veeregowda,et al.  Limit of detection of genomic DNA by conventional PCR for estimating the load of Staphylococcus aureus and Escherichia coli associated with bovine mastitis , 2015, Folia Microbiologica.

[25]  Juan Li,et al.  A Rapid Detection Method of Brucella with Quantum Dots and Magnetic Beads Conjugated with Different Polyclonal Antibodies , 2017, Nanoscale Research Letters.

[26]  H. Ou,et al.  Rapid Detection of Staphylococcus Aureus by Loop-Mediated Isothermal Amplification , 2014, Applied Biochemistry and Biotechnology.

[27]  Kok-Gan Chan,et al.  Rapid methods for the detection of foodborne bacterial pathogens: principles, applications, advantages and limitations , 2015, Front. Microbiol..

[28]  T. Notomi,et al.  Loop-mediated isothermal amplification of DNA. , 2000, Nucleic acids research.

[29]  Wei Jin,et al.  Self-priming compartmentalization digital LAMP for point-of-care. , 2012, Lab on a chip.

[30]  M. Madou,et al.  A microdevice for rapid, monoplex and colorimetric detection of foodborne pathogens using a centrifugal microfluidic platform. , 2018, Biosensors & bioelectronics.

[31]  G. Klein,et al.  Development and validation of a loop mediated isothermal amplification (LAMP) assay for the detection of Staphylococcus aureus in bovine mastitis milk samples. , 2016, Molecular and cellular probes.

[32]  George M Whitesides,et al.  "Paper Machine" for Molecular Diagnostics. , 2015, Analytical chemistry.

[33]  Mohammed Zourob,et al.  Rapid and low-cost biosensor for the detection of Staphylococcus aureus. , 2017, Biosensors & bioelectronics.

[34]  P. Tomasula,et al.  Two Methods for Increased Specificity and Sensitivity in Loop-Mediated Isothermal Amplification , 2015, Molecules.