Networks in cell biology

Introduction 1. Network views of the cell Paolo De Los Rios and Michele Vendruscolo 2. Transcriptional regulatory networks Sarath Chandra Janga and M. Madan Babu 3. Transcription factors and gene regulatory networks Matteo Brilli, Elissa Calistri and Pietro Lio 4. Experimental methods for protein interaction identification Peter Uetz, Bjorn Titz, Seesandra V. Rajagopala and Gerard Cagney 5. Modeling protein interaction networks Francesco Rao 6. Dynamics and evolution of metabolic networks Daniel Segre 7. Hierarchical modularity in biological networks: the case of metabolic networks Erzsebet Ravasz Regan 8. Signalling networks Gian Paolo Rossini Appendix 1. Complex networks: from local to global properties D. Garlaschelli and G. Caldarelli Appendix 2. Modelling the local structure of networks D. Garlaschelli and G. Caldarelli Appendix 3. Higher-order topological properties S. Ahnert, T. Fink and G. Caldarelli Appendix 4. Elementary mathematical concepts A. Gabrielli and G. Caldarelli References.

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