A Multi-Threshold Segmentation for Tree-Level Parameter Extraction in a Deciduous Forest Using Small-Footprint Airborne LiDAR Data

The development of new approaches to tree-level parameter extraction for forest resource inventory and management is an important area of ongoing research, which puts forward high requirements for the capabilities of single-tree segmentation and detection methods. Conventional methods implement segmenting routine with same resolution threshold for overstory and understory, ignoring that their lidar point densities are different, which leads to over-segmentation of the understory trees. To improve the segmentation accuracy of understory trees, this paper presents a multi-threshold segmentation approach for tree-level parameter extraction using small-footprint airborne LiDAR (Light Detection And Ranging) data. First, the point clouds are pre-processed and encoded to canopy layers according to the lidar return number, and multi-threshold segmentation using DSM-based (Digital Surface Model) method is implemented for each layer; tree segments are then combined across layers by merging criteria. Finally, individual trees are delineated, and tree parameters are extracted. The novelty of this method lies in its application of multi-resolution threshold segmentation strategy according to the variation of LiDAR point density in different canopy layers. We applied this approach to 271 permanent sample plots of the University of Kentucky’s Robinson Forest, a deciduous canopy-closed forest with complex terrain and vegetation conditions. Experimental results show that a combination of multi-resolution threshold segmentation based on stratification and cross-layer tree segments merging method can provide a significant performance improvement in individual tree-level forest measurement. Compared with DSM-based method, the proposed multi-threshold segmentation approach strongly improved the average detection rate (from 52.3% to 73.4%) and average overall accuracy (from 65.2% to 76.9%) for understory trees. The overall accuracy increased from 75.1% to 82.6% for all trees, with an increase of the coefficient of determination R2 by 20 percentage points. The improvement of tree detection method brings the estimation of structural parameters for single trees up to an accuracy level: For tree height, R2 increased by 5.0 percentage points from 90% to 95%; and for tree location, the mean difference decreased by 23 cm from 105 cm to 82 cm.

[1]  Juha Hyyppä,et al.  Effects of Individual Tree Detection Error Sources on Forest Management Planning Calculations , 2011, Remote. Sens..

[2]  Lorenzo Bruzzone,et al.  A Hierarchical Approach to Three-Dimensional Segmentation of LiDAR Data at Single-Tree Level in a Multilayered Forest , 2016, IEEE Transactions on Geoscience and Remote Sensing.

[3]  P. Gong,et al.  Isolating individual trees in a savanna woodland using small footprint lidar data , 2006 .

[4]  Sylvie Durrieu,et al.  PTrees: A point-based approach to forest tree extraction from lidar data , 2014, Int. J. Appl. Earth Obs. Geoinformation.

[5]  Helga Van Miegroet,et al.  Relative Role of Understory and Overstory in Carbon and Nitrogen Cycling in a Southern Appalachian Spruce-Fir Forest , 2007 .

[6]  K. O. Niemann,et al.  Local Maximum Filtering for the Extraction of Tree Locations and Basal Area from High Spatial Resolution Imagery , 2000 .

[7]  E. Jules,et al.  Assessing the relationships between stand development and understory vegetation using a 420-year chronosequence , 2008 .

[8]  Juha Hyyppä,et al.  An International Comparison of Individual Tree Detection and Extraction Using Airborne Laser Scanning , 2012, Remote. Sens..

[9]  Marco Heurich,et al.  Estimation of regeneration coverage in a temperate forest by 3D segmentation using airborne laser scanning data , 2016, Int. J. Appl. Earth Obs. Geoinformation.

[10]  B. Koch,et al.  Detection of individual tree crowns in airborne lidar data , 2006 .

[11]  J. Hyyppä,et al.  Change Detection Techniques for Canopy Height Growth Measurements Using Airborne Laser Scanner Data , 2006 .

[12]  Jun Zhang,et al.  A robust approach for tree segmentation in deciduous forests using small-footprint airborne LiDAR data , 2016, Int. J. Appl. Earth Obs. Geoinformation.

[13]  Wei Chen,et al.  Airborne LiDAR Remote Sensing for Individual Tree Forest Inventory Using Trunk Detection-Aided Mean Shift Clustering Techniques , 2018, Remote. Sens..

[14]  Hamid Hamraz,et al.  Forest understory trees can be segmented accurately within sufficiently dense airborne laser scanning point clouds , 2017, Scientific Reports.

[15]  Beat Koch,et al.  Development of Filtering , Segmentation and Modelling Modules for Lidar and Multispectral Data as a Fundament of an Automatic Forest Inventory System , 2004 .

[16]  Linhai Jing,et al.  Improving the efficiency and accuracy of individual tree crown delineation from high-density LiDAR data , 2014, Int. J. Appl. Earth Obs. Geoinformation.

[17]  Cheng Wang,et al.  Utility of multitemporal lidar for forest and carbon monitoring: Tree growth, biomass dynamics, and carbon flux , 2018 .

[18]  Keith M. Reynolds,et al.  Computer applications in sustainable forest management : including perspectives on collaboration and integration , 2006 .

[19]  B. Koch,et al.  A Lidar Point Cloud Based Procedure for Vertical Canopy Structure Analysis And 3D Single Tree Modelling in Forest , 2008, Sensors.

[20]  Norbert Pfeifer,et al.  Delineation of Tree Crowns and Tree Species Classification From Full-Waveform Airborne Laser Scanning Data Using 3-D Ellipsoidal Clustering , 2014, IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing.

[21]  George C. Hurtt,et al.  How important is individual tree information for biomass modeling and mapping , 2012 .

[22]  T. Noland,et al.  Automated delineation of individual tree crowns from lidar data by multi-scale analysis and segmentation , 2012 .

[23]  Maggi Kelly,et al.  A New Method for Segmenting Individual Trees from the Lidar Point Cloud , 2012 .

[24]  Randolph H. Wynne,et al.  Estimating plot-level tree heights with lidar : local filtering with a canopy-height based variable window size , 2002 .

[25]  S. Popescu,et al.  A voxel-based lidar method for estimating crown base height for deciduous and pine trees , 2008 .

[26]  M. Heurich Automatic recognition and measurement of single trees based on data from airborne laser scanning over the richly structured natural forests of the Bavarian Forest National Park , 2008 .

[27]  Laura S. Kenefic,et al.  Layer Stacking: A Novel Algorithm for Individual Forest Tree Segmentation from LiDAR Point Clouds , 2017 .

[28]  George C. Hurtt,et al.  An efficient, multi-layered crown delineation algorithm for mapping individual tree structure across multiple ecosystems , 2014 .

[29]  Muhammad Zulkarnain Abdul Rahman,et al.  Tree crown delineation from high resolution airborne LiDAR based on densities of high points , 2009 .

[30]  Q. Guo,et al.  A bottom-up approach to segment individual deciduous trees using leaf-off lidar point cloud data , 2014 .

[31]  Virpi Junttila,et al.  Algorithm for Extracting Digital Terrain Models under Forest Canopy from Airborne LiDAR Data , 2014, Remote. Sens..

[32]  S. Popescu,et al.  Seeing the Trees in the Forest: Using Lidar and Multispectral Data Fusion with Local Filtering and Variable Window Size for Estimating Tree Height , 2004 .

[33]  Lin Cao,et al.  An Automated Hierarchical Approach for Three-Dimensional Segmentation of Single Trees Using UAV LiDAR Data , 2018, Remote. Sens..

[34]  Pierre Soille,et al.  Morphological Image Analysis: Principles and Applications , 2003 .

[35]  Sylvie Durrieu,et al.  Multi-level filtering segmentation to measure individual tree parameters based on Lidar data: Application to a mountainous forest with heterogeneous stands , 2011, Int. J. Appl. Earth Obs. Geoinformation.

[36]  P. Gong,et al.  Detection of individual trees and estimation of tree height using LiDAR data , 2007, Journal of Forest Research.

[37]  Frédéric Bretar,et al.  3-D mapping of a multi-layered Mediterranean forest using ALS data , 2012 .

[38]  Michael E. Schaepman,et al.  Quantification of hidden canopy volume of airborne laser scanning data using a voxel traversal algorithm , 2017 .

[39]  Åsa Persson,et al.  Detecting and measuring individual trees using an airborne laser scanner , 2002 .

[40]  Joanne C. White,et al.  Lidar sampling for large-area forest characterization: A review , 2012 .

[41]  Hinrich Schütze,et al.  Introduction to information retrieval , 2008 .

[42]  Hamid Hamraz,et al.  Vertical stratification of forest canopy for segmentation of understory trees within small-footprint airborne LiDAR point clouds , 2016, 1701.00169.

[43]  J. Antos UNDERSTORY PLANTS IN TEMPERATE FORESTS , 2011 .