Overview of Nomenclature of Nuclear Receptors

Nuclear receptor pharmacology has, to a certain extent, led the way, compared with other receptor systems, in the appreciation that ligands may exert very diverse pharmacology, based on their individual chemical structure and the allosteric changes induced in the receptor/accessory protein complex. This can lead to very selective pharmacological effects, which may not necessarily be predicted from the experience with other agonists/partial agonists/antagonists. If this is the case, then drug discovery may be back to drug-specific pharmacology (where each drug may have an original profile), rather than specific-drug pharmacology (where agents specific for a receptor have a distinct profile). As functional selectivity is indeed a crucial mechanism to be considered when going through the drug discovery development process, then initial screens using reconstituted systems may not show the appropriate pharmacology, simply because the required stoichiometry of corepressors and coactivators may not be present to select the best compounds; therefore, multiple effector systems are necessary to screen for differential activation, and, even then, screening with in vivo pathophysiological models may ultimately be required for the selection process—a massive but necessary task for pharmacologists. Thus, the characterization of nuclear receptors and their associated proteins and the ligands that interact with them will remain a challenge to pharmacologists.

[1]  M.,et al.  Transcriptional Activation and Nuclear Targeting Signals of the Human Androgen Receptor * , 2001 .

[2]  S. Haffner,et al.  Effect of Rosiglitazone Treatment on Nontraditional Markers of Cardiovascular Disease in Patients With Type 2 Diabetes Mellitus , 2002, Circulation.

[3]  J. Chen,et al.  Steroid/nuclear receptor coactivators. , 2000, Vitamins and hormones.

[4]  P. Chambon,et al.  Phosphorylation by p38MAPK and recruitment of SUG‐1 are required for RA‐induced RARγ degradation and transactivation , 2002, The EMBO journal.

[5]  P. Argos,et al.  Human oestrogen receptor cDNA: sequence, expression and homology to v-erb-A , 1986, Nature.

[6]  J. Gustafsson,et al.  Transcriptional corepression by SHP: molecular mechanisms and physiological consequences , 2005, Trends in Endocrinology & Metabolism.

[7]  Shih-Ming Huang,et al.  Synergistic, p160 Coactivator-dependent Enhancement of Estrogen Receptor Function by CARM1 and p300* , 2000, The Journal of Biological Chemistry.

[8]  G. Hager,et al.  Dynamics of nuclear receptor movement and transcription. , 2004, Biochimica et biophysica acta.

[9]  Michael G. Rosenfeld,et al.  Controlling nuclear receptors: the circular logic of cofactor cycles , 2005, Nature Reviews Molecular Cell Biology.

[10]  B. O’Malley,et al.  The 26S Proteasome Is Required for Estrogen Receptor-α and Coactivator Turnover and for Efficient Estrogen Receptor-α Transactivation , 2000 .

[11]  E. Levin,et al.  Rapid actions of plasma membrane estrogen receptors , 2001, Trends in Endocrinology & Metabolism.

[12]  B. O’Malley,et al.  Proteasome-dependent degradation of the human estrogen receptor. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[13]  H. Gronemeyer,et al.  Co-regulator recruitment and the mechanism of retinoic acid receptor synergy , 2002, Nature.

[14]  R. Fletterick,et al.  Structural basis for ligand-independent activation of the orphan nuclear receptor LRH-1. , 2003, Molecular cell.

[15]  Cem Elbi,et al.  Ligand-Specific Dynamics of the Progesterone Receptor in Living Cells and during Chromatin Remodeling In Vitro , 2005, Molecular and Cellular Biology.

[16]  S. Kato,et al.  Retracted: Ligand‐induced transrepression by VDR through association of WSTF with acetylated histones , 2005, The EMBO journal.

[17]  C. Glass,et al.  The coregulator exchange in transcriptional functions of nuclear receptors. , 2000, Genes & development.

[18]  Heike Brand,et al.  Estrogen Receptor-α Directs Ordered, Cyclical, and Combinatorial Recruitment of Cofactors on a Natural Target Promoter , 2003, Cell.

[19]  Myles Brown,et al.  Cell cycle progression stimulated by tamoxifen-bound estrogen receptor-alpha and promoter-specific effects in breast cancer cells deficient in N-CoR and SMRT. , 2005, Molecular endocrinology.

[20]  P. Chambon,et al.  Phosphorylation of the retinoic acid receptor-alpha by protein kinase A. , 1995, Molecular endocrinology.

[21]  T. Willson,et al.  Crystal Structure of the Glucocorticoid Receptor Ligand Binding Domain Reveals a Novel Mode of Receptor Dimerization and Coactivator Recognition , 2002, Cell.

[22]  C. Allis,et al.  Methylation of Histone H4 at Arginine 3 Facilitating Transcriptional Activation by Nuclear Hormone Receptor , 2001, Science.

[23]  M. Koken,et al.  Retinoic Acid Induces Proteasome-Dependent Degradation of Retinoic Acid Receptor α (RARα) and Oncogenic RARα Fusion Proteins , 1999 .

[24]  S. Fuqua,et al.  Estrogen Receptor Variants , 2004, Journal of Mammary Gland Biology and Neoplasia.

[25]  Z. Nawaz,et al.  Specific ubiquitin-conjugating enzymes promote degradation of specific nuclear receptor coactivators. , 2003, Molecular endocrinology.

[26]  M. Lazar,et al.  direct repeat . represses transcription as a dimer on a novel The monomer-binding orphan receptor RevErb , 1995 .

[27]  M. Lazar,et al.  The CoRNR motif controls the recruitment of corepressors by nuclear hormone receptors , 1999, Nature.

[28]  B. Futcher,et al.  Functional overlap of sequences that activate transcription and signal ubiquitin-mediated proteolysis. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[29]  N. Spinner,et al.  Unique forms of human and mouse nuclear receptor corepressor SMRT. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[30]  K. Yamamoto,et al.  Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA , 2003, Nature.

[31]  C. J. Barnes,et al.  Coregulators and chromatin remodeling in transcriptional control , 2004, Molecular carcinogenesis.

[32]  M. Geiser,et al.  X-Ray Structure of the hROR LBD at 1 . 63 Å : Structural and Functional Data that Cholesterol or a Cholesterol Derivative Is the Natural Ligand of ROR , 2002 .

[33]  Sohaib A. Khan,et al.  A two-site model for antiestrogen action , 2004, Mechanisms of Ageing and Development.

[34]  L. Moore,et al.  Subtype specific effects of peroxisome proliferator-activated receptor ligands on corepressor affinity. , 2003, Biochemistry.

[35]  G. Hager,et al.  Dynamic Shuttling and Intranuclear Mobility of Nuclear Hormone Receptors* , 2003, The Journal of Biological Chemistry.

[36]  M Carlquist,et al.  Structural insights into the mode of action of a pure antiestrogen. , 2001, Structure.

[37]  S. Khorasanizadeh The Nucleosome From Genomic Organization to Genomic Regulation , 2004, Cell.

[38]  P. Sigler,et al.  Structural determinants of nuclear receptor assembly on DNA direct repeats , 1995, Nature.

[39]  R. Goodman,et al.  Acetylation of Nuclear Hormone Receptor-Interacting Protein RIP140 Regulates Binding of the Transcriptional Corepressor CtBP , 2001, Molecular and Cellular Biology.

[40]  Ralf Flaig,et al.  Structural Basis for the Deactivation of the Estrogen-related Receptor γ by Diethylstilbestrol or 4-Hydroxytamoxifen and Determinants of Selectivity* , 2004, Journal of Biological Chemistry.

[41]  Christine Dreyer,et al.  Control of the peroxisomal β-oxidation pathway by a novel family of nuclear hormone receptors , 1992, Cell.

[42]  Bert W O'Malley,et al.  Coregulator function: a key to understanding tissue specificity of selective receptor modulators. , 2004, Endocrine reviews.

[43]  K. Yamamoto,et al.  ATP-driven chromatin remodeling activity and histone acetyltransferases act sequentially during transactivation by RAR/RXR In vitro. , 2000, Molecular cell.

[44]  K. Horwitz,et al.  The partial agonist activity of antagonist-occupied steroid receptors is controlled by a novel hinge domain-binding coactivator L7/SPA and the corepressors N-CoR or SMRT. , 1997, Molecular endocrinology.

[45]  J. McNally,et al.  The glucocorticoid receptor: rapid exchange with regulatory sites in living cells. , 2000, Science.

[46]  G. Ailhaud,et al.  Cloning of a Protein That Mediates Transcriptional Effects of Fatty Acids in Preadipocytes , 1995, The Journal of Biological Chemistry.

[47]  M. Privalsky,et al.  The SMRT corepressor is a target of phosphorylation by protein kinase CK2 (casein kinase II) , 2001, Molecular and Cellular Biochemistry.

[48]  C. Allis,et al.  The language of covalent histone modifications , 2000, Nature.

[49]  J. Lehmann,et al.  Molecular recognition of fatty acids by peroxisome proliferator-activated receptors. , 2000, Molecular cell.

[50]  Christopher K. Glass,et al.  Exchange of N-CoR Corepressor and Tip60 Coactivator Complexes Links Gene Expression by NF-κB and β-Amyloid Precursor Protein , 2002, Cell.

[51]  P Argos,et al.  The chicken oestrogen receptor sequence: homology with v‐erbA and the human oestrogen and glucocorticoid receptors. , 1986, The EMBO journal.

[52]  P. Chambon,et al.  Promoter specificity of the two transcriptional activation functions of the human oestrogen receptor in yeast. , 1992, Nucleic acids research.

[53]  K.,et al.  Diverse signaling pathways modulate nuclear receptor recruitment of N-CoR and SMRT complexes. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[54]  K. Yamamoto,et al.  Glucocorticoid Receptor Transcriptional Activity Determined by Spacing of Receptor and Nonreceptor DNA Sites* , 1998, The Journal of Biological Chemistry.

[55]  John H. White,et al.  Corepressor recruitment by agonist-bound nuclear receptors. , 2004, Vitamins and hormones.

[56]  N. Weigel,et al.  Ligand-independent activation of steroid hormone receptors , 1998, Journal of Molecular Medicine.

[57]  M. Gilman,et al.  Proteasome‐mediated degradation of transcriptional activators correlates with activation domain potency in vivo , 1999, The EMBO journal.

[58]  J. McLachlan,et al.  Environmental signaling: what embryos and evolution teach us about endocrine disrupting chemicals. , 2001, Endocrine reviews.

[59]  Li Zhao,et al.  Hormone binding induces rapid proteasome-mediated degradation of thyroid hormone receptors. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[60]  Hui Li,et al.  SMRTe, a silencing mediator for retinoid and thyroid hormone receptors-extended isoform that is more related to the nuclear receptor corepressor. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[61]  A. Cato,et al.  Rapid Actions of Steroid Receptors in Cellular Signaling Pathways , 2002, Science's STKE.

[62]  J. Shine,et al.  Sequence and expression of human estrogen receptor complementary DNA. , 1986, Science.

[63]  P. Chambon,et al.  The dimerization interfaces formed between the DNA binding domains of RXR, RAR and TR determine the binding specificity and polarity of the full‐length receptors to direct repeats. , 1994, The EMBO journal.

[64]  P. Chambon,et al.  The N‐terminal DNA‐binding ‘zinc finger’ of the oestrogen and glucocorticoid receptors determines target gene specificity. , 1988, The EMBO journal.

[65]  K. Umesono,et al.  Determinants for selective RAR and TR recognition of direct repeat HREs. , 1993, Genes & development.

[66]  R. Roeder,et al.  Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells. , 2000, Trends in biochemical sciences.

[67]  J. Font de Mora,et al.  AIB1 Is a Conduit for Kinase-Mediated Growth Factor Signaling to the Estrogen Receptor , 2000, Molecular and Cellular Biology.

[68]  Jun Qin,et al.  Purification and functional characterization of the human N‐CoR complex: the roles of HDAC3, TBL1 and TBLR1 , 2003, The EMBO journal.

[69]  J. Stephens,et al.  Interferon-γ-mediated Activation and Ubiquitin-Proteasome-dependent Degradation of PPARγ in Adipocytes* , 2002, The Journal of Biological Chemistry.

[70]  J. Ellenberg,et al.  Cyclic, proteasome-mediated turnover of unliganded and liganded ERalpha on responsive promoters is an integral feature of estrogen signaling. , 2003, Molecular cell.

[71]  Hong-Chiang Chang,et al.  Modulation of androgen receptor transactivation by gelsolin: a newly identified androgen receptor coregulator. , 2003, Cancer research.

[72]  P. Herrlich,et al.  Transcriptional cross-talk, the second mode of steroid hormone receptor action , 1998, Journal of Molecular Medicine.

[73]  S. Nagpal,et al.  Identification and Functional Separation of Retinoic Acid Receptor Neutral Antagonists and Inverse Agonists* , 1996, The Journal of Biological Chemistry.

[74]  P. Chambon,et al.  The patterns of binding of RAR, RXR and TR homo‐ and heterodimers to direct repeats are dictated by the binding specificites of the DNA binding domains. , 1993, The EMBO journal.

[75]  M. Lazar,et al.  The histone‐binding code of nuclear receptor co‐repressors matches the substrate specificity of histone deacetylase 3 , 2005, EMBO reports.

[76]  T. Archer,et al.  Chromatin remodelling by the glucocorticoid receptor requires the BRG1 complex , 1998, Nature.

[77]  M. Geiser,et al.  X-Ray Structure of the hRORα LBD at 1.63 Å , 2002 .

[78]  B. Katzenellenbogen,et al.  Estrogen receptor activation function 1 works by binding p160 coactivator proteins. , 1998, Molecular endocrinology.

[79]  M. Cobb,et al.  Mitogen-activated protein (MAP) kinase pathways: regulation and physiological functions. , 2001, Endocrine reviews.

[80]  W. V. Berghe,et al.  Glucocorticoid repression of AP-1 is not mediated by competition for nuclear coactivators. , 2001, Molecular endocrinology.

[81]  H. Gronemeyer,et al.  Cell‐specific inhibitory and stimulatory effects of Fos and Jun on transcription activation by nuclear receptors. , 1991, The EMBO journal.

[82]  J. Drouin,et al.  Novel dimeric Nur77 signaling mechanism in endocrine and lymphoid cells , 1997, Molecular and cellular biology.

[83]  J. Cidlowski,et al.  Molecular control of immune/inflammatory responses: interactions between nuclear factor-kappa B and steroid receptor-signaling pathways. , 1999, Endocrine reviews.

[84]  J. Gustafsson,et al.  Evolution of distinct DNA-binding specificities within the nuclear receptor family of transcription factors. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[85]  B. Luisi,et al.  DNA target selectivity by the vitamin D3 receptor: mechanism of dimer binding to an asymmetric repeat element. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[86]  S. Mani Ligand-Independent Activation of Progestin Receptors in Sexual Receptivity , 2001, Hormones and Behavior.

[87]  K. Ley,et al.  Interaction of oestrogen receptor with the regulatory subunit of phosphatidylinositol-3-OH kinase , 2000, Nature.

[88]  T. Willson,et al.  Structural Analyses Reveal Phosphatidyl Inositols as Ligands for the NR5 Orphan Receptors SF-1 and LRH-1 , 2005, Cell.

[89]  R. Evans,et al.  A transcriptional co-repressor that interacts with nuclear hormone receptors , 1995, Nature.

[90]  C. J. Huang,et al.  The enhancement of nuclear receptor transcriptional activation by a mouse actin-binding protein, alpha actinin 2. , 2004, Journal of molecular endocrinology.

[91]  B. O’Malley,et al.  The tau 4 activation domain of the thyroid hormone receptor is required for release of a putative corepressor(s) necessary for transcriptional silencing , 1995, Molecular and cellular biology.

[92]  O. Hermanson,et al.  Nuclear receptor coregulators: multiple modes of modification , 2002, Trends in Endocrinology & Metabolism.

[93]  D. Picard,et al.  Ligand-independent Activation of Steroid Receptors: New Roles for Old Players , 1999, Trends in Endocrinology & Metabolism.

[94]  William Bourguet,et al.  Crystal structure of the ligand-binding domain of the human nuclear receptor RXR-α , 1995, Nature.

[95]  Amir Gamliel,et al.  A SUMOylation-dependent pathway mediates transrepression of inflammatory response genes by PPAR-γ , 2005, Nature.

[96]  J. York,et al.  Estrogen-induced activation of mitogen-activated protein kinase requires mobilization of intracellular calcium. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[97]  N. Blomberg,et al.  Structure of the PPARα and -γ Ligand Binding Domain in Complex with AZ 242; Ligand Selectivity and Agonist Activation in the PPAR Family , 2001 .

[98]  R. Evans,et al.  Functional domains of the human glucocorticoid receptor , 1986, Cell.

[99]  F. B. Davis,et al.  Identification of the putative MAP kinase docking site in the thyroid hormone receptor-beta1 DNA-binding domain: functional consequences of mutations at the docking site. , 2003, Biochemistry.

[100]  M. Stallcup,et al.  Developmentally Essential Protein Flightless I Is a Nuclear Receptor Coactivator with Actin Binding Activity , 2004, Molecular and Cellular Biology.

[101]  B. Katzenellenbogen,et al.  Estrogen action via the cAMP signaling pathway: stimulation of adenylate cyclase and cAMP-regulated gene transcription. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[102]  M. Lambert,et al.  Activation of nuclear receptors: a perspective from structural genomics. , 2003, Structure.

[103]  S. Kliewer,et al.  Crystallographic identification and functional characterization of phospholipids as ligands for the orphan nuclear receptor steroidogenic factor-1. , 2005, Molecular cell.

[104]  T. Perlmann,et al.  A novel pathway for vitamin A signaling mediated by RXR heterodimerization with NGFI-B and NURR1. , 1995, Genes & development.

[105]  R. Evans,et al.  The Nuclear Receptor Superfamily: a Rosetta Stone for Physiology , 1985 .

[106]  S. Fuqua,et al.  Androgen Receptor Acetylation Governs trans Activation and MEKK1-Induced Apoptosis without Affecting In Vitro Sumoylation and trans-Repression Function , 2002, Molecular and Cellular Biology.

[107]  R. Latorre,et al.  Acute Activation of Maxi-K Channels (hSlo) by Estradiol Binding to the β Subunit , 1999 .

[108]  A. Bilancio,et al.  PI3‐kinase in concert with Src promotes the S‐phase entry of oestradiol‐stimulated MCF‐7 cells , 2001, The EMBO journal.

[109]  J. Bastien,et al.  Nuclear retinoid receptors and the transcription of retinoid-target genes. , 2004, Gene.

[110]  R. Goodman,et al.  CREB-binding Protein and p300 in Transcriptional Regulation* , 2001, The Journal of Biological Chemistry.

[111]  B. O’Malley,et al.  Coactivator and corepressor regulation of the agonist/antagonist activity of the mixed antiestrogen, 4-hydroxytamoxifen. , 1997, Molecular endocrinology.

[112]  A nuclear receptor corepressor modulates transcriptional activity of antagonist-occupied steroid hormone receptor. , 1998, Molecular endocrinology.

[113]  B. O’Malley,et al.  Coactivator/corepressor ratios modulate PR-mediated transcription by the selective receptor modulator RU486 , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[114]  Myles Brown,et al.  Molecular Determinants for the Tissue Specificity of SERMs , 2002, Science.

[115]  I. Issemann,et al.  Activation of a member of the steroid hormone receptor superfamily by peroxisome proliferators , 1990, Nature.

[116]  David M. Heery,et al.  A signature motif in transcriptional co-activators mediates binding to nuclear receptors , 1997, Nature.

[117]  R. Evans,et al.  The RXR heterodimers and orphan receptors , 1995, Cell.

[118]  P. Lefebvre,et al.  Serine 157, a Retinoic Acid Receptor α Residue Phosphorylated by Protein Kinase C in Vitro, Is Involved in RXR·RARα Heterodimerization and Transcriptional Activity* , 1999, The Journal of Biological Chemistry.

[119]  F. B. Davis,et al.  Rapid nongenomic effects of 3,5,3'-triiodo-L-thyronine on the intracellular pH of L-6 myoblasts are mediated by intracellular calcium mobilization and kinase pathways. , 2004, Endocrinology.

[120]  V. Laudet,et al.  Evolution of the nuclear receptor superfamily: early diversification from an ancestral orphan receptor. , 1997, Journal of molecular endocrinology.

[121]  V. Laudet,et al.  How many nuclear hormone receptors are there in the human genome? , 2001, Trends in genetics : TIG.

[122]  R. Evans,et al.  Primary structure and expression of a functional human glucocorticoid receptor cDNA , 1985, Nature.

[123]  L. Freedman,et al.  Modulation of nuclear receptor interactions by ligands: kinetic analysis using surface plasmon resonance. , 1996, Biochemistry.

[124]  M. Bagchi,et al.  Recruitment of Distinct Chromatin-modifying Complexes by Tamoxifen-complexed Estrogen Receptor at Natural Target Gene Promoters in Vivo* , 2004, Journal of Biological Chemistry.

[125]  P. Chambon,et al.  Dimerization interfaces formed between the DNA binding domains determine the cooperative binding of RXR/RAR and RXR/TR heterodimers to DR5 and DR4 elements. , 1994, The EMBO journal.

[126]  Myles Brown,et al.  Cofactor Dynamics and Sufficiency in Estrogen Receptor–Regulated Transcription , 2000, Cell.

[127]  R. Latorre,et al.  Acute activation of Maxi-K channels (hSlo) by estradiol binding to the beta subunit. , 1999, Science.

[128]  S. Wise,et al.  c-Jun Can Mediate Androgen Receptor-induced Transactivation* , 1996, The Journal of Biological Chemistry.

[129]  R. Evans,et al.  Nuclear receptors and lipid physiology: opening the X-files. , 2001, Science.

[130]  D. Picard Molecular endocrinology: Steroids tickle cells inside and out , 1998, Nature.

[131]  G. Hager,et al.  Rapid periodic binding and displacement of the glucocorticoid receptor during chromatin remodeling. , 2004, Molecular cell.

[132]  M. Karin,et al.  Mammalian MAP kinase signalling cascades , 2001, Nature.

[133]  R. Murray Molecular recognition. , 1999, Analytical chemistry.

[134]  M. Stallcup,et al.  Synergistic Enhancement of Nuclear Receptor Function by p160 Coactivators and Two Coactivators with Protein Methyltransferase Activities* , 2001, The Journal of Biological Chemistry.

[135]  Hung-Yun Lin,et al.  Integrin alphaVbeta3 contains a cell surface receptor site for thyroid hormone that is linked to activation of mitogen-activated protein kinase and induction of angiogenesis. , 2005, Endocrinology.

[136]  V. Laudet,et al.  Ligand binding and nuclear receptor evolution , 2000, BioEssays : news and reviews in molecular, cellular and developmental biology.

[137]  P. Chambon,et al.  Localisation of the oestradiol‐binding and putative DNA‐binding domains of the human oestrogen receptor. , 1986, The EMBO journal.

[138]  B. Katzenellenbogen,et al.  Different Regions in Activation Function-1 of the Human Estrogen Receptor Required for Antiestrogen- and Estradiol-dependent Transcription Activation* , 1996, The Journal of Biological Chemistry.

[139]  S. Khorasanizadeh,et al.  Structure of the RXR–RAR DNA‐binding complex on the retinoic acid response element DR1 , 2000, The EMBO journal.

[140]  J. Gambee,et al.  Phosphorylation of p300 at Serine 89 by Protein Kinase C* , 2000, The Journal of Biological Chemistry.

[141]  P. Chambon,et al.  Role of the two activating domains of the oestrogen receptor in the cell‐type and promoter‐context dependent agonistic activity of the anti‐oestrogen 4‐hydroxytamoxifen. , 1990, The EMBO journal.

[142]  J. Yates,et al.  A methylation-mediator complex in hormone signaling. , 2004, Genes & development.

[143]  G. Casari,et al.  Identification of Farnesoid X Receptor β as a Novel Mammalian Nuclear Receptor Sensing Lanosterol , 2003, Molecular and Cellular Biology.

[144]  Vincent Laudet,et al.  The nuclear receptor factsbook , 2002 .

[145]  David A. Agard,et al.  The Structural Basis of Estrogen Receptor/Coactivator Recognition and the Antagonism of This Interaction by Tamoxifen , 1998, Cell.

[146]  G. Haegeman,et al.  The interplay between the glucocorticoid receptor and nuclear factor-kappaB or activator protein-1: molecular mechanisms for gene repression. , 2003, Endocrine reviews.

[147]  Janet Hager,et al.  Modulation of human nuclear receptor LRH-1 activity by phospholipids and SHP , 2005, Nature Structural &Molecular Biology.

[148]  Millard H. Lambert,et al.  Asymmetry in the PPARγ/RXRα Crystal Structure Reveals the Molecular Basis of Heterodimerization among Nuclear Receptors , 2000 .

[149]  Tony Kouzarides,et al.  Acetylation: a regulatory modification to rival phosphorylation? , 2000, The EMBO journal.

[150]  B. O’Malley,et al.  Phosphorylation of Steroid Receptor Coactivator-1 , 2000, The Journal of Biological Chemistry.

[151]  David O. Morgan,et al.  Principles of CDK regulation , 1995, Nature.

[152]  H. Gronemeyer,et al.  Nuclear receptor ligand-binding domains: three-dimensional structures, molecular interactions and pharmacological implications. , 2000, Trends in pharmacological sciences.

[153]  T. Willson,et al.  Ligand binding and co-activator assembly of the peroxisome proliferator-activated receptor-γ , 1998, Nature.

[154]  Danny Reinberg,et al.  The constantly changing face of chromatin. , 2003, Science of aging knowledge environment : SAGE KE.

[155]  George Reid,et al.  Transcription in four dimensions: nuclear receptor‐directed initiation of gene expression , 2006, EMBO reports.

[156]  C. Turck,et al.  Growth Factors Signal to Steroid Receptors through Mitogen-activated Protein Kinase Regulation of p160 Coactivator Activity* , 2001, The Journal of Biological Chemistry.

[157]  K. Umesono,et al.  Differential expression and activation of a family of murine peroxisome proliferator-activated receptors. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[158]  S. Kato,et al.  25-Hydroxyvitamin D3 1α-Hydroxylase and Vitamin D Synthesis , 1997 .

[159]  O. Jänne,et al.  Involvement of Proteasome in the Dynamic Assembly of the Androgen Receptor Transcription Complex* , 2002, The Journal of Biological Chemistry.

[160]  R. Kingston,et al.  BRG-1 Is Recruited to Estrogen-Responsive Promoters and Cooperates with Factors Involved in Histone Acetylation , 2000, Molecular and Cellular Biology.

[161]  M. Privalsky,et al.  The role of corepressors in transcriptional regulation by nuclear hormone receptors. , 2004, Annual review of physiology.

[162]  S. Kato,et al.  The Tamoxifen-responsive Estrogen Receptor α Mutant D351Y Shows Reduced Tamoxifen-dependent Interaction with Corepressor Complexes* , 2001, The Journal of Biological Chemistry.

[163]  B. Katzenellenbogen,et al.  Nongenotropic, Sex-Nonspecific Signaling through the Estrogen or Androgen Receptors Dissociation from Transcriptional Activity , 2001, Cell.

[164]  W. Pratt,et al.  Steroid receptor interactions with heat shock protein and immunophilin chaperones. , 1997, Endocrine reviews.

[165]  D. Chan,et al.  Puri ® cation and functional characterization of the human N-CoR complex : the roles of HDAC 3 , TBL 1 and TBLR 1 , 2022 .

[166]  J. Starrett,et al.  Rational design of RAR‐selective ligands revealed by RARβ crystal stucture , 2004, EMBO reports.

[167]  J. Cidlowski,et al.  Importance of Ligand Affinity Receptor Mobility in Living Cells : the Molecular Determinants of Glucocorticoid , 2003 .

[168]  P. Herrlich Cross-talk between glucocorticoid receptor and AP-1 , 2001, Oncogene.

[169]  D. Gewirth,et al.  Structural basis of VDR–DNA interactions on direct repeat response elements , 2002, The EMBO journal.

[170]  K. Kaestner,et al.  DNA Binding of the Glucocorticoid Receptor Is Not Essential for Survival , 1998, Cell.

[171]  Zbigniew Dauter,et al.  Molecular basis of agonism and antagonism in the oestrogen receptor , 1997, Nature.

[172]  L. Freedman,et al.  20-Epi Analogues of 1,25-Dihydroxyvitamin D3 Are Highly Potent Inducers of DRIP Coactivator Complex Binding to the Vitamin D3 Receptor* , 1999, The Journal of Biological Chemistry.

[173]  R. Gaynor,et al.  Formation of an IKKalpha-dependent transcription complex is required for estrogen receptor-mediated gene activation. , 2005, Molecular cell.

[174]  K. Hamil,et al.  Protein Inhibitors of Activated STAT Resemble Scaffold Attachment Factors and Function as Interacting Nuclear Receptor Coregulators* , 2002, The Journal of Biological Chemistry.

[175]  M. Cosma Ordered recruitment: gene-specific mechanism of transcription activation. , 2002, Molecular cell.

[176]  M. Karin,et al.  AP-1 as a regulator of cell life and death , 2002, Nature Cell Biology.

[177]  Thorsten Heinzel,et al.  Ligand-independent repression by the thyroid hormone receptor mediated by a nuclear receptor co-repressor , 1995, Nature.

[178]  A. Zelent,et al.  Origins and evolutionary diversification of the nuclear receptor superfamily , 2000, Cellular and Molecular Life Sciences CMLS.

[179]  Xiaohong Liu,et al.  Structure and function of Nurr1 identifies a class of ligand-independent nuclear receptors , 2003, Nature.

[180]  J. Lehmann,et al.  Orphan nuclear receptors: shifting endocrinology into reverse. , 1999, Science.

[181]  Millard H. Lambert,et al.  Structural basis for antagonist-mediated recruitment of nuclear co-repressors by PPARα , 2002, Nature.

[182]  S. Fortier,et al.  Effect of thyroid hormones on G proteins in synaptosomes of chick embryo. , 1996, Endocrinology.

[183]  S. Yeh,et al.  Supervillin associates with androgen receptor and modulates its transcriptional activity , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[184]  T. Shinoda,et al.  Characterization and DNA-binding properties of GRF, a novel monomeric binding orphan receptor related to GCNF and betaFTZ-F1. , 1999, European journal of biochemistry.

[185]  B. O’Malley,et al.  Identification of a new brain-specific transcription factor, NURR1. , 1992, Molecular endocrinology.

[186]  P. Bontempo,et al.  Tyrosine kinase/p21ras/MAP‐kinase pathway activation by estradiol‐receptor complex in MCF‐7 cells. , 1996, The EMBO journal.

[187]  Miguel Beato,et al.  Steroid hormone receptors: Many Actors in search of a plot , 1995, Cell.

[188]  M. Sierk,et al.  Structural basis of RXR-DNA interactions. , 2000, Journal of molecular biology.

[189]  J. Schwabe,et al.  Mechanism of the nuclear receptor molecular switch. , 2004, Trends in biochemical sciences.

[190]  Chawnshang Chang,et al.  Proteasome Activity Is Required for Androgen Receptor Transcriptional Activity via Regulation of Androgen Receptor Nuclear Translocation and Interaction with Coregulators in Prostate Cancer Cells* , 2002, The Journal of Biological Chemistry.

[191]  R. Roeder,et al.  The TRAP220 component of a thyroid hormone receptor- associated protein (TRAP) coactivator complex interacts directly with nuclear receptors in a ligand-dependent fashion. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[192]  F. B. Davis,et al.  Thyroid hormone causes mitogen-activated protein kinase-dependent phosphorylation of the nuclear estrogen receptor. , 2004, Endocrinology.

[193]  D. Edwards,et al.  Progesterone receptor contains a proline-rich motif that directly interacts with SH3 domains and activates c-Src family tyrosine kinases. , 2001, Molecular cell.

[194]  Pierre Chambon,et al.  The nuclear receptor superfamily: a personal retrospect on the first two decades. , 2005, Molecular endocrinology.

[195]  Vincent Laudet,et al.  Principles for modulation of the nuclear receptor superfamily , 2004, Nature Reviews Drug Discovery.

[196]  E. Yong,et al.  Filamin-A fragment localizes to the nucleus to regulate androgen receptor and coactivator functions , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[197]  John W. R. Schwabe,et al.  The crystal structure of the estrogen receptor DNA-binding domain bound to DNA: How receptors discriminate between their response elements , 1993, Cell.

[198]  P. Chambon A decade of molecular biology of retinoic acid receptors , 1996, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[199]  D. Kressler,et al.  Regulation of the transcriptional coactivator PGC-1 via MAPK-sensitive interaction with a repressor , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[200]  Rama Ranganathan,et al.  Structural Determinants of Allosteric Ligand Activation in RXR Heterodimers , 2004, Cell.

[201]  M. Rosenfeld,et al.  Transcription corepressor CtBP is an NAD(+)-regulated dehydrogenase. , 2002, Molecular cell.

[202]  F. Tronche,et al.  New insights into glucocorticoid and mineralocorticoid signaling: lessons from gene targeting. , 2000, Advances in pharmacology.

[203]  Identification of a new member of the steroid hormone receptor superfamily that is activated by a peroxisome proliferator and fatty acids. , 1992, Molecular endocrinology.

[204]  P. Chambon,et al.  Crystal structure of a heterodimeric complex of RAR and RXR ligand-binding domains. , 2000, Molecular cell.

[205]  T. Ikonen,et al.  Interaction between the Amino- and Carboxyl-terminal Regions of the Rat Androgen Receptor Modulates Transcriptional Activity and Is Influenced by Nuclear Receptor Coactivators* , 1997, The Journal of Biological Chemistry.

[206]  P Chambon,et al.  Structural basis for engineering of retinoic acid receptor isotype-selective agonists and antagonists. , 1999, Chemistry & biology.

[207]  C. Hänni,et al.  Ligand binding was acquired during evolution of nuclear receptors. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[208]  David A. Agard,et al.  Structural characterization of a subtype-selective ligand reveals a novel mode of estrogen receptor antagonism , 2002, Nature Structural Biology.

[209]  Paul Tempst,et al.  Ligand-dependent transcription activation by nuclear receptors requires the DRIP complex , 1999, Nature.

[210]  J. Wong,et al.  Nuclear receptor-dependent transcription with chromatin. Is it all about enzymes? , 2002, European journal of biochemistry.

[211]  Timothy M Willson,et al.  Hepatocyte nuclear factor 4 is a transcription factor that constitutively binds fatty acids. , 2002, Structure.

[212]  Neil J McKenna,et al.  A Steroid Receptor Coactivator, SRA, Functions as an RNA and Is Present in an SRC-1 Complex , 1999, Cell.

[213]  K. Umesono,et al.  A Unified Nomenclature System for the Nuclear Receptor Superfamily , 1999, Cell.

[214]  E. Alarid,et al.  Proteasome-mediated proteolysis of estrogen receptor: a novel component in autologous down-regulation. , 1999, Molecular endocrinology.

[215]  M. Haussler,et al.  Heterodimeric DNA Binding by the Vitamin D Receptor and Retinoid X Receptors Is Enhanced by 1,25-Dihydroxyvitamin D3 and Inhibited by 9-cis-Retinoic Acid , 1998, The Journal of Biological Chemistry.

[216]  K. Yamamoto,et al.  Disassembly of Transcriptional Regulatory Complexes by Molecular Chaperones , 2002, Science.

[217]  P. Webb,et al.  Differential SERM Effects on Corepressor Binding Dictate ERα Activity in Vivo * , 2003, The Journal of Biological Chemistry.

[218]  R. Evans,et al.  Regulation of Hormone-Induced Histone Hyperacetylation and Gene Activation via Acetylation of an Acetylase , 1999, Cell.

[219]  C. Glass,et al.  Molecular determinants of nuclear receptor-corepressor interaction. , 1999, Genes & development.

[220]  V. Giguère,et al.  Determinants of target gene specificity for ROR alpha 1: monomeric DNA binding by an orphan nuclear receptor , 1995, Molecular and cellular biology.

[221]  B. Turner,et al.  Cellular Memory and the Histone Code , 2002, Cell.

[222]  K. Korach,et al.  Estrogen receptor null mice: what have we learned and where will they lead us? , 1999, Endocrine reviews.

[223]  E. Jensen On the Mechanism of Estrogen Action , 2015, Perspectives in biology and medicine.

[224]  Neil J. McKenna,et al.  Combinatorial Control of Gene Expression by Nuclear Receptors and Coregulators , 2002, Cell.

[225]  S. Shoelson,et al.  Crystal Structure of the HNF4α Ligand Binding Domain in Complex with Endogenous Fatty Acid Ligand* , 2002, The Journal of Biological Chemistry.

[226]  R. DeSalle,et al.  A new method to localize and test the significance of incongruence: detecting domain shuffling in the nuclear receptor superfamily. , 2000, Systematic biology.

[227]  B. Katzenellenbogen,et al.  Direct Acetylation of the Estrogen Receptor α Hinge Region by p300 Regulates Transactivation and Hormone Sensitivity* , 2001, The Journal of Biological Chemistry.

[228]  L. Glass,et al.  Inferring models of gene expression dynamics. , 2004, Journal of theoretical biology.

[229]  M. Privalsky,et al.  The SMRT Corepressor Is Regulated by a MEK-1 Kinase Pathway: Inhibition of Corepressor Function Is Associated with SMRT Phosphorylation and Nuclear Export , 2000, Molecular and Cellular Biology.

[230]  M. Wehling Specific, nongenomic actions of steroid hormones. , 1997, Annual review of physiology.

[231]  Jason D. Hoeksema,et al.  Analysis of Estrogen Receptor Interaction with a Repressor of Estrogen Receptor Activity (REA) and the Regulation of Estrogen Receptor Transcriptional Activity by REA* , 2000, The Journal of Biological Chemistry.

[232]  K. Umesono,et al.  Determinants of target gene specificity for steroid/thyroid hormone receptors , 1989, Cell.

[233]  R. Roeder,et al.  The role of general initiation factors in transcription by RNA polymerase II. , 1996, Trends in biochemical sciences.