Sugar and signal-transducer binding sites of the Escherichia coli galactose chemoreceptor protein.

D-galactose-binding (or chemoreceptor) protein of Escherichia coli serves as an initial component for both chemotaxis towards galactose and glucose and high-affinity active transport of the two sugars. Well-refined x-ray structures of the liganded forms of the wild-type and a mutant protein isolated from a strain defective in chemotaxis but fully competent in transport have provided a molecular view of the sugar-binding site and of a site for interacting with the Trg transmembrane signal transducer. The geometry of the sugar-binding site, located in the cleft between the two lobes of the bilobate protein, is novel in that it is designed for tight binding and sequestering of either the alpha or beta anomer of the D-stereoisomer of the 4-epimers galactose and glucose. Binding specificity and affinity are conferred primarily by polar planar side-chain residues that form intricate networks of cooperative and bidentate hydrogen bonds with the sugar substrates, and secondarily by aromatic residues that sandwich the pyranose ring. Each of the pairs of anomeric hydroxyls and epimeric hydroxyls is recognized by a distinct Asp residue. The site for interaction with the transducer is about 18 A from the sugar-binding site. Mutation of Gly74 to Asp at this site, concomitant with considerable changes in the local ordered water structures, contributes to the lack of productive interaction with the transmembrane signal transducer.

[1]  Y. Anraku Transport of sugars and amino acids in bacteria. I. Purification and specificity of the galactose- and leucine-binding proteins. , 1968, The Journal of biological chemistry.

[2]  R. W. Hogg,et al.  l-Arabinose Binding Protein from Escherichia coli B/r , 1969, Journal of bacteriology.

[3]  B. Lee,et al.  The interpretation of protein structures: estimation of static accessibility. , 1971, Journal of molecular biology.

[4]  J. Adler,et al.  Isolation and Complementation of Mutants in Galactose Taxis and Transport , 1974, Journal of bacteriology.

[5]  R. W. Hogg,et al.  A comparison of the L-arabinose- and D-galactose-binding proteins of Escherichia coli B-r. , 1974, Journal of Biological Chemistry.

[6]  J. Adler Chemotaxis in bacteria. , 1975, Annual review of biochemistry.

[7]  T. A. Jones,et al.  A graphics model building and refinement system for macromolecules , 1978 .

[8]  F A Quiocho,et al.  Location of the sugar-binding site of L-arabinose-binding protein. Sugar derivative syntheses, sugar binding specificity, and difference Fourier analyses. , 1979, The Journal of biological chemistry.

[9]  K D Wilkinson,et al.  A suggestion for naming faces of ring compounds. , 1980, Proceedings of the National Academy of Sciences of the United States of America.

[10]  F A Quiocho,et al.  The mechanism of sugar binding to the periplasmic receptor for galactose chemotaxis and transport in Escherichia coli. , 1980, The Journal of biological chemistry.

[11]  P. Argos,et al.  Structural prediction of sugar-binding proteins functional in chemotaxis and transport. , 1981, The Journal of biological chemistry.

[12]  J. Cox,et al.  Regulation of brain cyclic nucleotide phosphodiesterase by calmodulin. A quantitative analysis. , 1981, The Journal of biological chemistry.

[13]  J A McCammon,et al.  Hinge-bending in L-arabinose-binding protein. The "Venus's-flytrap" model. , 1982, The Journal of biological chemistry.

[14]  F A Quiocho,et al.  Rates of ligand binding to periplasmic proteins involved in bacterial transport and chemotaxis. , 1983, The Journal of biological chemistry.

[15]  M. N. Vyas,et al.  The 3 A resolution structure of a D-galactose-binding protein for transport and chemotaxis in Escherichia coli. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[16]  Florante A. Quiocho,et al.  Novel stereospecificity of the L-arabinose-binding protein , 1984, Nature.

[17]  F. Quiocho,et al.  Sulphate sequestered in the sulphate-binding protein of Salmonella typhimurium is bound solely by hydrogen bonds , 1985, Nature.

[18]  W A Hendrickson,et al.  Refinement of a molecular model for lamprey hemoglobin from Petromyzon marinus. , 1985, Journal of molecular biology.

[19]  F A Quiocho,et al.  Carbohydrate-binding proteins: tertiary structures and protein-sugar interactions. , 1986, Annual review of biochemistry.

[20]  J. L. Smith,et al.  Structural heterogeneity in protein crystals. , 1986, Biochemistry.

[21]  Florante A. Quiocho,et al.  A novel calcium binding site in the galactose-binding protein of bacterial transport and chemotaxis , 1987, Nature.

[22]  Tom Alber,et al.  Contributions of hydrogen bonds of Thr 157 to the thermodynamic stability of phage T4 lysozyme , 1988, Nature.

[23]  Florante A. Quiocho,et al.  Stabilization of charges on isolated ionic groups sequestered in proteins by polarized peptide units , 1987, Nature.

[24]  F. Quiocho Molecular features and basic understanding of protein-carbohydrate interactions: the arabinose-binding protein-sugar complex. , 1988, Current topics in microbiology and immunology.

[25]  M. Perutz,et al.  Indirect allosteric effects of a neutral mutation. Structure of deoxyhaemoglobin north Chicago (ProC2(36)beta----Ser). , 1988, Journal of molecular biology.

[26]  F A Quiocho,et al.  The 2 A resolution structure of the sulfate-binding protein involved in active transport in Salmonella typhimurium. , 1988, Journal of molecular biology.