Recent advancements in surface‐enhanced laser desorption/ionization‐time of flight‐mass spectrometry

The overall history and recent advances in surface enhanced laser desorption/ionization‐time of flight‐mass spectrometry (SELDI‐TOF‐MS) technology is reviewed herein. Fundamentals of SELDI‐TOF analysis are presented while drawing comparisons with other laser‐based mass spectrometry techniques. The application of SELDI‐TOF‐MS to functional genomics and biomarker discovery is discussed and exemplified by elucidating a biomarker candidate for prostatic carcinoma. Finally, a short discussion regarding future SELDI requirements and developments is supplied.

[1]  HIGH-ENERGY IONS FROM A Q-SWITCHED LASER , 1964 .

[2]  N. Fenner,et al.  Laser Used for Mass Analysis , 1966 .

[3]  F. Hillenkamp,et al.  Laser microprobe mass analysis of organic materials , 1975, Nature.

[4]  F. Hillenkamp,et al.  Mass Spectrometric Analysis of Laser Induced Microplasmas from Organic Samples , 1978 .

[5]  E. W. Schlag,et al.  Multiphoton mass spectrometry , 1983 .

[6]  H. Heinen,et al.  LAMMA 1000, a new laser microprobe mass analyzer for bulk samples , 1983 .

[7]  Proton and deuteron magnetic resonances of the strongly hydrogen-bonded bisformate complexes (HCO2)2H- and (HCO2)2D- in aqueous solution. The primary isotope effect on chemical shift, and isotopic fractionation of labile hydrogen in hydrogen-deuterium mixtures , 1984 .

[8]  J. Fenn,et al.  Electrospray ion source: another variation on the free-jet theme , 1984 .

[9]  R. Weinkauf,et al.  High-resolution laser mass spectrometry , 1984 .

[10]  D. Lubman Optically selective molecular mass spectrometry , 1987 .

[11]  R N Zare,et al.  Determination of phenylthiohydantoin-amino acids by two-step laser desorption/multiphoton ionization. , 1987, Analytical chemistry.

[12]  D. Lubman,et al.  Pulsed laser desorption of biological molecules in supersonic beam mass spectrometry with resonant two-photon ionization detection. , 1987, Analytical chemistry.

[13]  Koichi Tanaka,et al.  Protein and polymer analyses up to m/z 100 000 by laser ionization time-of-flight mass spectrometry , 1988 .

[14]  M. Karas,et al.  Laser desorption ionization of proteins with molecular masses exceeding 10,000 daltons. , 1988, Analytical chemistry.

[15]  H. Lilja Cell biology of semenogelin: Zellbiologie von Semenogelin , 1990 .

[16]  Bernhard Spengler,et al.  Metastable decay of peptides and proteins in matrix‐assisted laser‐desorption mass spectrometry , 1991 .

[17]  R Kaufmann,et al.  Peptide sequencing by matrix-assisted laser-desorption mass spectrometry. , 1992, Rapid communications in mass spectrometry : RCM.

[18]  T. Yip,et al.  New desorption strategies for the mass spectrometric analysis of macromolecules , 1993 .

[19]  R Kaufmann,et al.  Mass spectrometric sequencing of linear peptides by product-ion analysis in a reflectron time-of-flight mass spectrometer using matrix-assisted laser desorption ionization. , 1993, Rapid communications in mass spectrometry : RCM.

[20]  D. Kirsch,et al.  Sequenching of peptides in a time-of-flight mass spectrometer: evaluation of postsource decay following matrix-assisted laser desorption ionisation (MALDI) , 1994 .

[21]  K. Tomer,et al.  Direct Analysis of Affinity-Bound Analytes by MALDI/TOF MS , 1994 .

[22]  D. Lubman,et al.  Matrix-assisted laser desorption/ionization using an active perfluorosulfonated ionomer film substrate. , 1994, Analytical chemistry.

[23]  K. Tomer,et al.  Epitope mapping of the gastrin‐releasing peptide/anti‐bombesin monoclonal antibody complex by proteolysis followed by matrix‐assisted laser desorption ionization mass spectrometry , 1994, Protein science : a publication of the Protein Society.

[24]  Klaus Biemann,et al.  Amino acid sequencing of proteins , 1994 .

[25]  C. Fenselau,et al.  Poly(vinylidene difluoride) membranes as the interface between laser desorption mass spectrometry, gel electrophoresis, and in situ proteolysis , 1994 .

[26]  J. Allison,et al.  Direct matrix-assisted laser desorption ionization mass spectrometric analysis of proteins immobilized on nylon-based membranes , 1994, Journal of the American Society for Mass Spectrometry.

[27]  Friedrich Lottspeich,et al.  Matrix-assisted laser desorption ionization mass spectrometry of proteins electroblotted after polyacrylamide gel electrophoresis , 1994 .

[28]  Matrix-assisted laser desorption/ionization mass spectrometry of restriction enzyme-digested plasmid DNA using an active Nafion substrate. , 1994, Rapid communications in mass spectrometry : RCM.

[29]  C. Fenselau,et al.  Surfaces for interfacing protein gel electrophoresis directly with mass spectrometry , 1995 .

[30]  J. Yates,et al.  Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database. , 1995, Analytical chemistry.

[31]  R. Nelson,et al.  Rapid tryptic mapping using enzymatically active mass spectrometer probe tips. , 1995, Analytical chemistry.

[32]  R. Orlando,et al.  Probe-immobilized affinity chromatography/mass spectrometry. , 1995, Analytical chemistry.

[33]  G. Anderson,et al.  Bio-affinity characterization mass spectrometry. , 1995, Rapid communications in mass spectrometry : RCM.

[34]  A. Alexander,et al.  Polyethylene membrane as a sample support for direct matrix-assisted laser desorption/ionization mass spectrometric analysis of high mass proteins. , 1995, Analytical chemistry.

[35]  C. Cantor,et al.  Matrix-assisted laser desorption/ionization mass spectrometry of immobilized duplex DNA probes. , 1995, Nucleic acids research.

[36]  Use of a nitrocellulose film substrate in matrix-assisted laser desorption/ionization mass spectrometry for DNA mapping and screening. , 1995, Analytical chemistry.

[37]  R. Nelson,et al.  Peptide characterization using bioreactive mass spectrometer probe tips. , 1995, Rapid communications in mass spectrometry : RCM.

[38]  C. Gagnon,et al.  Purification and characterization of the active precursor of a human sperm motility inhibitor secreted by the seminal vesicles: identity with semenogelin. , 1996, Biology of reproduction.

[39]  Lloyd M. Smith,et al.  A SELF-ASSEMBLED MATRIX MONOLAYER FOR UV-MALDI MASS SPECTROMETRY , 1996 .

[40]  T. William Hutchens,et al.  Surface Chemistries Enabling Photoinduced Uncoupling/Desorption of Covalently Tethered Biomolecules. , 1996, The Journal of organic chemistry.

[41]  Surface arrays of energy absorbing polymers enabling covalent attachment of biomolecules for subsequent laser-induced uncoupling/desorption , 1996 .

[42]  R. Orlando,et al.  New immobilization chemistry for probe affinity mass spectrometry. , 1996, Rapid communications in mass spectrometry : RCM.

[43]  J. Tabet,et al.  MALDI-TOFMS Identification of ‘Odorant Binding Proteins’ (OBPs) Electroblotted onto Poly(vinylidene difluoride) Membranes , 1996 .

[44]  D. Schriemer,et al.  Combining avidin-biotin chemistry with matrix-assisted laser desorption/ionization mass spectrometry. , 1996, Analytical chemistry.

[45]  T. Yip,et al.  Cryptic Antigenic Determinants on the Extracellular Pyruvate Dehydrogenase Complex/Mimeotope Found in Primary Biliary Cirrhosis , 1996, The Journal of Biological Chemistry.

[46]  J. Malm,et al.  Distribution and tissue expression of semenogelin I and II in man as demonstrated by in situ hybridization and immunocytochemistry. , 1996, Journal of andrology.

[47]  R. Nelson,et al.  BIA/MS: interfacing biomolecular interaction analysis with mass spectrometry. , 1997, Analytical biochemistry.

[48]  A. Brockman,et al.  A desalting approach for MALDI-MS using on-probe hydrophobic self-assembled monolayers. , 1997, Analytical chemistry.

[49]  R. Nelson,et al.  Surface plasmon resonance biomolecular interaction analysis mass spectrometry. 1. Chip-based analysis. , 1997, Analytical chemistry.

[50]  A. Lüchow,et al.  Recovery of nucleic acids from immobilized biotin-streptavidin complexes using ammonium hydroxide and applications in MALDI-TOF mass spectrometry. , 1997, Analytical chemistry.

[51]  R. Nelson The use of bioreactive probes in protein characterization. , 1997, Mass spectrometry reviews.

[52]  Rosetta Inpharmatics chips in , 1997, Nature Biotechnology.

[53]  A. Verkman,et al.  Evidence for phosphorylation of serine 753 in CFTR using a novel metal‐ion affinity resin and matrix‐assisted laser desorption mass spectrometry , 1997, Protein science : a publication of the Protein Society.

[54]  R. Nelson,et al.  Surface plasmon resonance biomolecular interaction analysis mass spectrometry. 2. Fiber optic-based analysis. , 1997, Analytical chemistry.

[55]  A. Schaeffer,et al.  Two-dimensional gel electrophoresis detects prostate-specific antigen-alpha1-antichymotrypsin complex in serum but not in prostatic fluid. , 1997, Clinical chemistry.

[56]  T. Stamey,et al.  Prostate specific antigen in benign prostatic hyperplasia: purification and characterization. , 1997, The Journal of urology.

[57]  On-probe immunoaffinity extraction by matrix-assisted laser desorption/ionization mass spectrometry. , 1998, Analytical chemistry.

[58]  D. Schriemer,et al.  MALDI mass spectrometry combined with avidin-biotin chemistry for analysis of protein modifications. , 1998, Analytical chemistry.

[59]  N. N. Shah,et al.  Optimization of a hydrophobic solid-phase extraction interface for matrix-assisted laser desorption/ionization. , 1998, Journal of mass spectrometry : JMS.

[60]  W. Ens,et al.  ORTHOGONAL INJECTION OF MATRIX-ASSISTED LASER DESORPTION/IONIZATION IONS INTO A TIME-OF-FLIGHT SPECTROMETER THROUGH A COLLISIONAL DAMPING INTERFACE , 1998 .

[61]  E. Strauss New Ways to Probe the Molecules of Life , 1998, Science.

[62]  On-probe solid-phase extraction/MALDI-MS using ion-pairing interactions for the cleanup of peptides and proteins. , 1998, Analytical chemistry.

[63]  R. Nelson,et al.  Advances in surface plasmon resonance biomolecular interaction analysis mass spectrometry (BIA/MS) , 1999, Journal of molecular recognition : JMR.

[64]  B. Taillon,et al.  BIA/MS of epitope-tagged peptides directly from E. coli lysate: multiplex detection and protein identification at low-femtomole to subfemtomole levels. , 1999, Analytical chemistry.

[65]  K. Tomer,et al.  Direct analysis of the products of sequential cleavages of peptides and proteins affinity-bound to immobilized metal ion beads by matrix-assisted laser desorption/ionization mass spectrometry. , 1999, Analytical biochemistry.

[66]  Solid-phase extraction/MALDI-MS: extended ion-pairing surfaces for the on-target cleanup of protein samples. , 1999, Analytical chemistry.

[67]  B. Clark,et al.  Rapid identification of DNA-binding proteins by mass spectrometry , 1999, Nature Biotechnology.

[68]  G. Siuzdak,et al.  Desorption–ionization mass spectrometry on porous silicon , 1999, Nature.

[69]  D J Stephens,et al.  The role of cholesterol in the biosynthesis of beta-amyloid. , 1999, Neuroreport.

[70]  J. Reilly,et al.  Toward a simple, expedient, and complete analysis of human hemoglobin by MALDI-TOFMS. , 1999, Analytical chemistry.

[71]  A general method for producing bioaffinity MALDI probes. , 1999, Analytical chemistry.

[72]  C. Fenselau,et al.  Lectin-based affinity capture for MALDI-MS analysis of bacteria. , 1999, Analytical chemistry.