Near infrared optical tomography using NIRFAST: Algorithm for numerical model and image reconstruction.

Diffuse optical tomography, also known as near infrared tomography, has been under investigation, for non-invasive functional imaging of tissue, specifically for the detection and characterization of breast cancer or other soft tissue lesions. Much work has been carried out for accurate modeling and image reconstruction from clinical data. NIRFAST, a modeling and image reconstruction package has been developed, which is capable of single wavelength and multi-wavelength optical or functional imaging from measured data. The theory behind the modeling techniques as well as the image reconstruction algorithms is presented here, and 2D and 3D examples are presented to demonstrate its capabilities. The results show that 3D modeling can be combined with measured data from multiple wavelengths to reconstruct chromophore concentrations within the tissue. Additionally it is possible to recover scattering spectra, resulting from the dominant Mie-type scatter present in tissue. Overall, this paper gives a comprehensive over view of the modeling techniques used in diffuse optical tomographic imaging, in the context of NIRFAST software package.

[1]  Albert Cerussi,et al.  Noninvasive functional optical spectroscopy of human breast tissue , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[2]  V. Ntziachristos Fluorescence molecular imaging. , 2006, Annual review of biomedical engineering.

[3]  Simon R. Arridge,et al.  Elsevier Editorial System(tm) for NeuroImage Manuscript Draft Manuscript Number: Title: THREE DIMENSIONAL OPTICAL IMAGING OF BLOOD VOLUME AND OXYGENATION IN THE NEONATAL BRAIN , 2005 .

[4]  Sandra K. Soho,et al.  Characterization of hemoglobin, water, and NIR scattering in breast tissue: analysis of intersubject variability and menstrual cycle changes. , 2004, Journal of biomedical optics.

[5]  Kenneth Levenberg A METHOD FOR THE SOLUTION OF CERTAIN NON – LINEAR PROBLEMS IN LEAST SQUARES , 1944 .

[6]  Britton Chance,et al.  Breast imaging technology: Probing physiology and molecular function using optical imaging - applications to breast cancer , 2000, Breast Cancer Research.

[7]  Brian W Pogue,et al.  Strategies for absolute calibration of near infrared tomographic tissue imaging. , 2003, Advances in experimental medicine and biology.

[8]  F. Jöbsis Noninvasive, infrared monitoring of cerebral and myocardial oxygen sufficiency and circulatory parameters. , 1977, Science.

[9]  B. Wilson,et al.  A diffusion theory model of spatially resolved, steady-state diffuse reflectance for the noninvasive determination of tissue optical properties in vivo. , 1992, Medical physics.

[10]  T. Krouskop,et al.  Elastic Moduli of Breast and Prostate Tissues under Compression , 1998, Ultrasonic imaging.

[11]  B. Pogue,et al.  Spectral priors improve near-infrared diffuse tomography more than spatial priors. , 2005, Optics letters.

[12]  B. Pogue,et al.  Three-dimensional optical tomography: resolution in small-object imaging. , 2003, Applied optics.

[13]  David T Delpy,et al.  Measurement of the absolute optical properties and cerebral blood volume of the adult human head with hybrid differential and spatially resolved spectroscopy , 2006, Physics in medicine and biology.

[14]  Brian W. Pogue,et al.  Magnetic resonance-guided near-infrared tomography of the breast , 2004 .

[15]  M. Sato [Mechanical properties of living tissues]. , 1986, Iyo denshi to seitai kogaku. Japanese journal of medical electronics and biological engineering.

[16]  A H Hielscher,et al.  Use of penalty terms in gradient-based iterative reconstruction schemes for optical tomography. , 2001, Journal of biomedical optics.

[17]  Vasilis Ntziachristos,et al.  Volumetric tomography of fluorescent proteins through small animals in vivo. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[18]  John C. Roeske,et al.  Linac-Based Intensity Modulated Total Marrow Irradiation (IM-TMI) , 2006 .

[19]  Hamid Dehghani,et al.  Image reconstruction of effective Mie scattering parameters of breast tissue in vivo with near-infrared tomography. , 2006, Journal of biomedical optics.

[20]  B. Pogue,et al.  Spectrally resolved bioluminescence optical tomography. , 2006, Optics letters.

[21]  M. Schweiger,et al.  The finite element method for the propagation of light in scattering media: boundary and source conditions. , 1995, Medical physics.

[22]  Soren D. Konecky,et al.  Diffuse optical tomography of breast cancer during neoadjuvant chemotherapy: a case study with comparison to MRI. , 2005, Medical physics.

[23]  B. Pogue,et al.  Near-Infrared Characterization of Breast Tumors In Vivo using Spectrally-Constrained Reconstruction , 2005, Technology in cancer research & treatment.

[24]  Huabei Jiang,et al.  Three-dimensional optical tomographic imaging of breast in a human subject , 2001, IEEE Transactions on Medical Imaging.

[25]  S. Arridge Optical tomography in medical imaging , 1999 .

[26]  Hamid Dehghani,et al.  Breast deformation modelling for image reconstruction in near infrared optical tomography. , 2004, Physics in medicine and biology.

[27]  D. Boas,et al.  Improving the diffuse optical imaging spatial resolution of the cerebral hemodynamic response to brain activation in humans. , 2004, Optics letters.

[28]  B. Pogue,et al.  Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography. , 2007, Medical physics.

[29]  M. Schweiger,et al.  Photon-measurement density functions. Part 2: Finite-element-method calculations. , 1995, Applied optics.

[30]  V. Ntziachristos,et al.  Non-invasive and quantitative near-infrared haemoglobin spectrometry in the piglet brain during hypoxic stress, using a frequency-domain multidistance instrument† , 2001, Physics in medicine and biology.

[31]  Hamid Dehghani,et al.  Retinotopic mapping of adult human visual cortex with high-density diffuse optical tomography , 2007, Proceedings of the National Academy of Sciences.

[32]  K. Paulsen,et al.  Spatially varying optical property reconstruction using a finite element diffusion equation approximation. , 1995, Medical physics.

[33]  S R Arridge,et al.  Optical tomographic reconstruction in a complex head model using a priori region boundary information. , 1999, Physics in medicine and biology.

[34]  B. Pogue,et al.  Multiwavelength three-dimensional near-infrared tomography of the breast: initial simulation, phantom, and clinical results. , 2003, Applied optics.

[35]  Harold M. Swartz,et al.  Oxygen Transport to Tissue XXIV , 2003, Advances in Experimental Medicine and Biology.

[36]  C. Bouman,et al.  Fluorescence optical diffusion tomography. , 2003, Applied optics.

[37]  S R Arridge,et al.  Direct calculation of the moments of the distribution of photon time of flight in tissue with a finite-element method. , 1995, Applied optics.

[38]  S. Arridge,et al.  Nonuniqueness in diffusion-based optical tomography. , 1998, Optics letters.

[39]  K D Paulsen,et al.  Enhanced frequency-domain optical image reconstruction in tissues through total-variation minimization. , 1996, Applied optics.

[40]  Alexander Hartov,et al.  Electromagnetic breast imaging: average tissue property values in women with negative clinical findings. , 2004, Radiology.

[41]  S R Arridge,et al.  Recent advances in diffuse optical imaging , 2005, Physics in medicine and biology.

[42]  B. Pogue,et al.  Image-guided optical spectroscopy provides molecular-specific information in vivo: MRI-guided spectroscopy of breast cancer hemoglobin, water, and scatterer size. , 2007, Optics letters.

[43]  Hamid Dehghani,et al.  Contrast-detail analysis characterizing diffuse optical fluorescence tomography image reconstruction. , 2005, Journal of biomedical optics.

[44]  Brian W. Pogue,et al.  Interpreting hemoglobin and water concentration, oxygen saturation, and scattering measured in vivo by near-infrared breast tomography , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[45]  V Ntziachristos,et al.  Recovery of optical parameters in multiple-layered diffusive media: theory and experiments. , 2001, Journal of the Optical Society of America. A, Optics, image science, and vision.

[46]  H. J. van Staveren,et al.  Light scattering in Intralipid-10% in the wavelength range of 400-1100 nm. , 1991, Applied optics.

[47]  Brian W. Pogue,et al.  Optical images from pathophysiological signals within breast tissue using three-dimensional near-infrared light , 2003, SPIE BiOS.

[48]  B. Pogue,et al.  Spectrally constrained chromophore and scattering near-infrared tomography provides quantitative and robust reconstruction. , 2005, Applied optics.

[49]  J. Schotland Continuous-wave diffusion imaging , 1997 .

[50]  Zheng Geng,et al.  Rainbow three‐dimensional camera: new concept of high‐speed three‐dimensional vision systems , 1996 .

[51]  S R Arridge,et al.  Time resolved optical tomography of the human forearm. , 2001, Physics in medicine and biology.

[52]  William R B Lionheart EIT reconstruction algorithms: pitfalls, challenges and recent developments. , 2004, Physiological measurement.

[53]  Keith D. Paulsen,et al.  Validation of hemoglobin and water molar absorption spectra in near-infrared diffuse optical tomography , 2003, SPIE BiOS.

[54]  M. Schweiger,et al.  A finite element approach for modeling photon transport in tissue. , 1993, Medical physics.

[55]  S R Arridge,et al.  Three-dimensional time-resolved optical tomography of a conical breast phantom. , 2001, Applied optics.

[56]  J. Mourant,et al.  Predictions and measurements of scattering and absorption over broad wavelength ranges in tissue phantoms. , 1997, Applied optics.

[57]  B. Pogue,et al.  Image-guided diffuse optical fluorescence tomography implemented with Laplacian-type regularization. , 2007, Optics express.

[58]  S. Arridge,et al.  INSTITUTE OF PHYSICS PUBLISHING PHYSICS IN MEDICINE AND BIOLOGY , 2003 .

[59]  B. Pogue,et al.  Combining near-infrared tomography and magnetic resonance imaging to study in vivo breast tissue: implementation of a Laplacian-type regularization to incorporate magnetic resonance structure. , 2005, Journal of biomedical optics.

[60]  B. Pogue,et al.  A parallel-detection frequency-domain near-infrared tomography system for hemoglobin imaging of the , 2001 .

[61]  M. Schweiger,et al.  Diffuse optical tomography with spectral constraints and wavelength optimization. , 2005, Applied optics.

[62]  Hamid Dehghani,et al.  Magnetic-resonance-imaging-coupled broadband near-infrared tomography system for small animal brain studies. , 2005, Applied optics.

[63]  K D Paulsen,et al.  Spectroscopic diffuse optical tomography for the quantitative assessment of hemoglobin concentration and oxygen saturation in breast tissue. , 1999, Applied optics.

[64]  Hamid Dehghani,et al.  The effects of internal refractive index variation in near-infrared optical tomography: a finite element modelling approach. , 2003, Physics in medicine and biology.