Systematic analysis of CCCH zinc finger family in Brassica napus showed that BnRR-TZFs are involved in stress resistance

[1]  D. Soltis,et al.  Polyploidy: an evolutionary and ecological force in stressful times , 2020, The Plant cell.

[2]  Min Wu,et al.  Identification of CCCH Zinc Finger Proteins Family in Moso Bamboo (Phyllostachys edulis), and PeC3H74 Confers Drought Tolerance to Transgenic Plants , 2020, Frontiers in Plant Science.

[3]  Jukon Kim,et al.  Overexpression of OsC3H10, a CCCH-Zinc Finger, Improves Drought Tolerance in Rice by Regulating Stress-Related Genes , 2020, Plants.

[4]  Margaret H. Frank,et al.  TBtools - an integrative toolkit developed for interactive analyses of big biological data. , 2020, Molecular plant.

[5]  Chunjin Li,et al.  Identification, evolution and expression analyses of whole genome-wide TLP gene family in Brassica napus , 2020, BMC Genomics.

[6]  F. Massi,et al.  A Disorder-to-Order Transition Mediates RNA Binding of the Caenorhabditis elegans Protein MEX-5. , 2020, Biophysical journal.

[7]  Baoshan Wang,et al.  C2H2 Zinc Finger Proteins: Master Regulators of Abiotic Stress Responses in Plants , 2020, Frontiers in Plant Science.

[8]  Gongke Zhou,et al.  Overexpression of PdC3H17 Confers Tolerance to Drought Stress Depending on Its CCCH Domain in Populus , 2020, Frontiers in Plant Science.

[9]  Can Alkan,et al.  Discovery of tandem and interspersed segmental duplications using high-throughput sequencing , 2019, Bioinform..

[10]  D. Cai,et al.  Suppression of abscisic acid biosynthesis at the early infection stage of Verticillium longisporum in oilseed rape (Brassica napus) , 2019, Molecular plant pathology.

[11]  Jonathan D. G. Jones,et al.  Extreme resistance to Potato virus Y in potato carrying the Ry sto gene is mediated by a TIR‐NLR immune receptor , 2019, Plant biotechnology journal.

[12]  Abdullah,et al.  A genome-wide approach to the comprehensive analysis of GASA gene family in Glycine max , 2019, Plant Molecular Biology.

[13]  Genome-wide identification and characterization of abiotic-stress responsive SOD (superoxide dismutase) gene family in Brassica juncea and B. rapa , 2019, BMC genomics.

[14]  P. Khurana,et al.  Genome-wide Analysis of bZIP Transcription Factors in wheat and Functional Characterization of a TabZIP under Abiotic Stress , 2019, Scientific Reports.

[15]  Pan Li,et al.  BrLAS, a GRAS Transcription Factor From Brassica rapa, Is Involved in Drought Stress Tolerance in Transgenic Arabidopsis , 2018, Front. Plant Sci..

[16]  Y. Ruan,et al.  Genome-wide analysis and stress-responsive expression of CCCH zinc finger family genes in Brassica rapa , 2018, BMC Plant Biology.

[17]  Longfu Zhu,et al.  GhHB12, a HD-ZIP I Transcription Factor, Negatively Regulates the Cotton Resistance to Verticillium dahliae , 2018, International journal of molecular sciences.

[18]  X. Xiong,et al.  The CCCH-type transcription factor BnZFP1 is a positive regulator to control oleic acid levels through the expression of diacylglycerol O-acyltransferase 1 gene in Brassica napus. , 2018, Plant physiology and biochemistry : PPB.

[19]  K. Witek,et al.  Extreme resistance to Potato virus Y in potato carrying the Ry sto gene is mediated by a TIR‐NLR immune receptor , 2018, bioRxiv.

[20]  Sun-Young Lee,et al.  Arabidopsis non-TZF gene AtC3H17 functions as a positive regulator in salt stress response. , 2018, Biochemical and biophysical research communications.

[21]  Kun Lu,et al.  Genome-Wide Analysis of the PYL Gene Family and Identification of PYL Genes That Respond to Abiotic Stress in Brassica napus , 2018, Genes.

[22]  Qin Chen,et al.  Genome-Wide Identification and Characterization of the Potato bHLH Transcription Factor Family , 2018, Genes.

[23]  Publisher's Note , 2018, Anaesthesia.

[24]  Xuan Lan Thi Hoang,et al.  Transcription Factors and Their Roles in Signal Transduction in Plants under Abiotic Stresses , 2017, Current genomics.

[25]  Pooja Singh,et al.  Genome-wide Analysis of the CCCH Zinc-Finger Gene Family in Banana (Musa acuminata): An Insight Into Motif and Gene Structure Arrangement, Evolution and Salt Stress Responses , 2017, Tropical Plant Biology.

[26]  Soonkap Kim,et al.  RRM domain of Arabidopsis splicing factor SF1 is important for pre-mRNA splicing of a specific set of genes , 2017, Plant Cell Reports.

[27]  B. Kobe,et al.  Towards the structure of the TIR-domain signalosome. , 2017, Current opinion in structural biology.

[28]  P. Blackshear,et al.  An Ancient Family of RNA-Binding Proteins: Still Important! , 2017, Trends in biochemical sciences.

[29]  Shizuo Akira,et al.  Regulation of mRNA stability by CCCH-type zinc-finger proteins in immune cells , 2017, International immunology.

[30]  J. Zhuang,et al.  Transcriptome-Wide Identification and Expression Analysis of the NAC Gene Family in Tea Plant [Camellia sinensis (L.) O. Kuntze] , 2016, PloS one.

[31]  Jyan-chyun Jang,et al.  Arginine-rich motif-tandem CCCH zinc finger proteins in plant stress responses and post-transcriptional regulation of gene expression. , 2016, Plant science : an international journal of experimental plant biology.

[32]  Shengwei Zhu,et al.  Identification of SET Domain-Containing Proteins in Gossypium raimondii and Their Response to High Temperature Stress , 2016, Scientific Reports.

[33]  H. Goodluck,et al.  Leucine-rich repeat kinase-1 regulates osteoclast function by modulating RAC1/Cdc42 Small GTPase phosphorylation and activation , 2016, American journal of physiology. Endocrinology and metabolism.

[34]  D. Barford,et al.  WD40 domain of Apc1 is critical for the coactivator-induced allosteric transition that stimulates APC/C catalytic activity , 2016, Proceedings of the National Academy of Sciences.

[35]  Chao Lv,et al.  Genome-Wide Analysis of APETALA2/Ethylene-Responsive Factor (AP2/ERF) Gene Family in Barley (Hordeum vulgare L.) , 2016, PloS one.

[36]  G. Jeena,et al.  WRKY Transcription Factors: Molecular Regulation and Stress Responses in Plants , 2016, Front. Plant Sci..

[37]  Sun-Young Lee,et al.  AtC3H17, a Non-Tandem CCCH Zinc Finger Protein, Functions as a Nuclear Transcriptional Activator and Has Pleiotropic Effects on Vegetative Development, Flowering and Seed Development in Arabidopsis. , 2016, Plant & cell physiology.

[38]  Anil Kumar Singh,et al.  Comparative phylogenetic analysis and transcriptional profiling of MADS-box gene family identified DAM and FLC-like genes in apple (Malusx domestica) , 2016, Scientific Reports.

[39]  Manisha Sharma,et al.  Expansion and Function of Repeat Domain Proteins During Stress and Development in Plants , 2016, Front. Plant Sci..

[40]  P. Lehner,et al.  A non-proteolytic role for ubiquitin in deadenylation of MHC-I mRNA by the RNA-binding E3-ligase MEX-3C , 2015, Nature Communications.

[41]  R. Peng,et al.  Transgenic Arabidopsis Plants Expressing Tomato Glutathione S-Transferase Showed Enhanced Resistance to Salt and Drought Stress , 2015, PloS one.

[42]  Qi Zhao,et al.  IBS: an illustrator for the presentation and visualization of biological sequences , 2015, Bioinform..

[43]  Rodrigo Lopez,et al.  The EMBL-EBI bioinformatics web and programmatic tools framework , 2015, Nucleic Acids Res..

[44]  Genome-wide identification of auxin response factor (ARF) genes and its tissue-specific prominent expression in Gossypium raimondii , 2015, Functional & Integrative Genomics.

[45]  Comprehensive analysis of CCCH-type zinc finger family genes facilitates functional gene discovery and reflects recent allopolyploidization event in tetraploid switchgrass , 2015, BMC Genomics.

[46]  Bo Hu,et al.  GSDS 2.0: an upgraded gene feature visualization server , 2014, Bioinform..

[47]  Aditya Banerjee,et al.  Abscisic-acid-dependent basic leucine zipper (bZIP) transcription factors in plant abiotic stress , 2015, Protoplasma.

[48]  Jungmook Kim,et al.  AtC3H14, a plant-specific tandem CCCH zinc-finger protein, binds to its target mRNAs in a sequence-specific manner and affects cell elongation in Arabidopsis thaliana. , 2014, The Plant journal : for cell and molecular biology.

[49]  Corinne Da Silva,et al.  Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome , 2014, Science.

[50]  Wayne E. Clarke,et al.  Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea , 2014, Genome Biology.

[51]  Xiaowu Wang,et al.  Genome triplication drove the diversification of Brassica plants , 2014, Horticulture Research.

[52]  K. Musier-Forsyth,et al.  The Arabidopsis thaliana tandem zinc finger 1 (AtTZF1) protein in RNA binding and decay. , 2014, The Plant journal : for cell and molecular biology.

[53]  D. Scheel,et al.  The Arabidopsis tandem zinc finger 9 protein binds RNA and mediates pathogen-associated molecular pattern-triggered immune responses. , 2014, Plant & cell physiology.

[54]  P. Civello,et al.  Expression of FaXTH1 and FaXTH2 genes in strawberry fruit. Cloning of promoter regions and effect of plant growth regulators , 2014 .

[55]  Jianhua Zhu,et al.  Regulation of Abiotic Stress Signalling by Arabidopsis C-Terminal Domain Phosphatase-Like 1 Requires Interaction with a K-Homology Domain-Containing Protein , 2013, PloS one.

[56]  A. Paterson,et al.  Different patterns of gene structure divergence following gene duplication in Arabidopsis , 2013, BMC Genomics.

[57]  Jyan-chyun Jang,et al.  The Arabidopsis tandem CCCH zinc finger proteins AtTZF4, 5 and 6 are involved in light-, abscisic acid- and gibberellic acid-mediated regulation of seed germination. , 2013, Plant, cell & environment.

[58]  Xiaohe Qing,et al.  Superfamily of ankyrin repeat proteins in tomato. , 2013, Gene.

[59]  H. J. Kim,et al.  An Arabidopsis R2R3‐MYB transcription factor, AtMYB20, negatively regulates type 2C serine/threonine protein phosphatases to enhance salt tolerance , 2013, FEBS letters.

[60]  Q. Ma,et al.  CCCH-Type Zinc Finger Family in Maize: Genome-Wide Identification, Classification and Expression Profiling under Abscisic Acid and Drought Treatments , 2012, PloS one.

[61]  Agnieszka Kiełbowicz-Matuk Involvement of plant C(2)H(2)-type zinc finger transcription factors in stress responses. , 2012, Plant science : an international journal of experimental plant biology.

[62]  S. Kim,et al.  Arabidopsis zinc finger proteins AtC3H49/AtTZF3 and AtC3H20/AtTZF2 are involved in ABA and JA responses. , 2012, Plant & cell physiology.

[63]  Xia Zhang,et al.  Molecular and physiological characterization of the Arabidopsis thaliana Oxidation-related Zinc Finger 2, a plasma membrane protein involved in ABA and salt stress response through the ABI2-mediated signaling pathway. , 2012, Plant & cell physiology.

[64]  Peng Chen,et al.  Comprehensive analysis of CCCH zinc finger family in poplar (Populus trichocarpa) , 2012, BMC Genomics.

[65]  Jun Liu,et al.  Signal transduction during cold, salt, and drought stresses in plants , 2011, Molecular Biology Reports.

[66]  J. Poulain,et al.  The genome of the mesopolyploid crop species Brassica rapa , 2011, Nature Genetics.

[67]  D. Ow,et al.  Stress tolerance to stress escape in plants: role of the OXS2 zinc‐finger transcription factor family , 2011, The EMBO journal.

[68]  Sarah A. Teichmann,et al.  Protein domain organisation: adding order , 2009, BMC Bioinformatics.

[69]  Jung Sun Kim,et al.  Transcriptome analysis in Brassica rapa under the abiotic stresses using Brassica 24K oligo microarray. , 2008, Molecules and cells.

[70]  Jian-Qun Chen,et al.  Recent duplications dominate NBS-encoding gene expansion in two woody species , 2008, Molecular Genetics and Genomics.

[71]  Y. Kamiya,et al.  SOMNUS, a CCCH-Type Zinc Finger Protein in Arabidopsis, Negatively Regulates Light-Dependent Seed Germination Downstream of PIL5[W] , 2008, The Plant Cell Online.

[72]  Guodong Yang,et al.  Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice , 2008, BMC Genomics.

[73]  Z. Chen,et al.  Evolution of genome size in Brassicaceae. , 2005, Annals of botany.

[74]  D. Stumpo,et al.  The CCCH tandem zinc-finger protein Zfp36l2 is crucial for female fertility and early embryonic development , 2004, Development.

[75]  H. Dyson,et al.  Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d , 2004, Nature Structural &Molecular Biology.

[76]  Steven B Cannon,et al.  The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana , 2004, BMC Plant Biology.

[77]  Thomas D. Schmittgen,et al.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. , 2001, Methods.

[78]  K. Shinozaki,et al.  Role of arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. , 1997, The Plant cell.