Molecular Evolution of the GATA Family of Transcription Factors: Conservation Within the DNA-Binding Domain
暂无分享,去创建一个
[1] D. Birnbaum,et al. Ancient large-scale genome duplications: phylogenetic and linkage analyses shed light on chordate genome evolution. , 1998, Molecular biology and evolution.
[2] C. Scazzocchio,et al. Subtle hydrophobic interactions between the seventh residue of the zinc finger loop and the first base of an HGATAR sequence determine promoter‐specific recognition by the Aspergillus nidulans GATA factor AreA , 1997, The EMBO journal.
[3] J. Burch,et al. Transcripts for Functionally Distinct Isoforms of Chicken GATA-5 Are Differentially Expressed from Alternative First Exons* , 1997, The Journal of Biological Chemistry.
[4] N. D. Clarke,et al. Zinc fingers in Caenorhabditis elegans: finding families and probing pathways. , 1998, Science.
[5] Da-Zhi Wang,et al. FOG-2, a Heart- and Brain-Enriched Cofactor for GATA Transcription Factors , 1999, Molecular and Cellular Biology.
[6] M. Nei,et al. The neighbor-joining method , 1987 .
[7] O. Yoshie,et al. TAL1 and LIM-Only Proteins Synergistically Induce Retinaldehyde Dehydrogenase 2 Expression in T-Cell Acute Lymphoblastic Leukemia by Acting as Cofactors for GATA3 , 1998, Molecular and Cellular Biology.
[8] A. Gronenborn,et al. The solution structure of a fungal AREA protein-DNA complex: an alternative binding mode for the basic carboxyl tail of GATA factors. , 1998, Journal of molecular biology.
[9] S. Orkin,et al. Transcriptional activation and DNA binding by the erythroid factor GF-1/NF-E1/Eryf 1. , 1990, Genes & development.
[10] K. Iatrou,et al. Developmental regulation of a silkworm gene encoding multiple GATA-type transcription factors by alternative splicing. , 1995, Journal of molecular biology.
[11] Sudhir Kumar,et al. MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers , 1994, Comput. Appl. Biosci..
[12] A. Sidow. Gen(om)e duplications in the evolution of early vertebrates. , 1996, Current opinion in genetics & development.
[13] Y. Fu,et al. nit-2, the major nitrogen regulatory gene of Neurospora crassa, encodes a protein with a putative zinc finger DNA-binding domain , 1990, Molecular and cellular biology.
[14] S. Orkin,et al. Increased gamma-globin expression in a nondeletion HPFH mediated by an erythroid-specific DNA-binding factor. , 1989, Nature.
[15] H. Arst,et al. Nitrogen regulation in Aspergillus: are two fingers better than one? , 1990, Gene.
[16] R. Raff,et al. Evidence for a clade of nematodes, arthropods and other moulting animals , 1997, Nature.
[17] H. Yang,et al. Distinct roles for the two cGATA-1 finger domains , 1992, Molecular and cellular biology.
[18] T. D. Schneider,et al. Information content of binding sites on nucleotide sequences. , 1986, Journal of molecular biology.
[19] S. Orkin,et al. Functional synergy and physical interactions of the erythroid transcription factor GATA-1 with the Krüppel family proteins Sp1 and EKLF , 1995, Molecular and cellular biology.
[20] P. Xu,et al. urbs1, a gene regulating siderophore biosynthesis in Ustilago maydis, encodes a protein similar to the erythroid transcription factor GATA-1. , 1993, Molecular and cellular biology.
[21] G. Macino,et al. White collar‐1, a central regulator of blue light responses in Neurospora, is a zinc finger protein. , 1996, The EMBO journal.
[22] M. Mattei,et al. A T‐cell specific TCR delta DNA binding protein is a member of the human GATA family. , 1991, The EMBO journal.
[23] A K Hopper,et al. SRD1, a S. cerevisiae gene affecting pre-rRNA processing contains a C2/C2 zinc finger motif. , 1994, Nucleic acids research.
[24] F. Grosveld,et al. The two zinc finger‐like domains of GATA‐1 have different DNA binding specificities. , 1993, The EMBO journal.
[25] L. Patthy,et al. Exon shuffling and other ways of module exchange. , 1996, Matrix biology : journal of the International Society for Matrix Biology.
[26] Y. Jiang,et al. The Xenopus GATA-4/5/6 genes are associated with cardiac specification and can regulate cardiac-specific transcription during embryogenesis. , 1996, Developmental biology.
[27] G. Marzluf,et al. Isolation and characterization of a new gene, sre, which encodes a GATA-type regulatory protein that controls iron transport in Neurospora crassa , 1998, Molecular and General Genetics MGG.
[28] P. Simpson,et al. Transcriptional activity of pannier is regulated negatively by heterodimerization of the GATA DNA-binding domain with a cofactor encoded by the u-shaped gene of Drosophila. , 1997, Genes & development.
[29] J. Visser,et al. Identification, cloning and sequence of the Aspergillus niger areA wide domain regulatory gene controlling nitrogen utilisation. , 1998, Biochimica et biophysica acta.
[30] F. Grosveld,et al. The 5′HS2 of the globin locus control region enhances transcription through the interaction of a multimeric complex binding at two functionally distinct NF‐E2 binding sites. , 1991, The EMBO journal.
[31] S. Orkin,et al. FOG, a Multitype Zinc Finger Protein, Acts as a Cofactor for Transcription Factor GATA-1 in Erythroid and Megakaryocytic Differentiation , 1997, Cell.
[32] T. Cooper,et al. Expression of the DAL80 gene, whose product is homologous to the GATA factors and is a negative regulator of multiple nitrogen catabolic genes in Saccharomyces cerevisiae, is sensitive to nitrogen catabolite repression , 1991, Molecular and cellular biology.
[33] M. Reitman,et al. An erythrocyte-specific DNA-binding factor recognizes a regulatory sequence common to all chicken globin genes. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[34] P. Newell,et al. Identification of the Cell Fate Gene Stalky in Dictyostelium , 1996, Cell.
[35] B. Magasanik,et al. Role of the GATA factors Gln3p and Nil1p of Saccharomyces cerevisiae in the expression of nitrogen-regulated genes. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[36] Dr. Susumu Ohno. Evolution by Gene Duplication , 1970, Springer Berlin Heidelberg.
[37] J. Dunlap,et al. Neurospora wc-1 and wc-2: transcription, photoresponses, and the origins of circadian rhythmicity. , 1997, Science.
[38] A. Gronenborn,et al. The N‐terminal fingers of chicken GATA‐2 and GATA–3 are independent sequence‐specific DNA binding domains , 1997, The EMBO journal.
[39] M. Davis,et al. Complementation of areA- regulatory gene mutations of Aspergillus nidulans by the heterologous regulatory gene nit-2 of Neurospora crassa. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[40] R. J. Hill,et al. end-1 encodes an apparent GATA factor that specifies the endoderm precursor in Caenorhabditis elegans embryos. , 1997, Genes & development.
[41] N D Clarke,et al. Covariation of residues in the homeodomain sequence family , 1995, Protein science : a publication of the Protein Society.
[42] Ziheng Yang,et al. PAML: a program package for phylogenetic analysis by maximum likelihood , 1997, Comput. Appl. Biosci..
[43] H. Arst,et al. Cloning of the regulatory gene areA mediating nitrogen metabolite repression in Aspergillus nidulans. , 1986, The EMBO journal.
[44] J. D. Engel,et al. DNA-binding specificities of the GATA transcription factor family , 1993, Molecular and cellular biology.
[45] E. Svensson,et al. Molecular cloning of FOG-2: a modulator of transcription factor GATA-4 in cardiomyocytes. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[46] A. Sidow,et al. Gene duplications and the origins of vertebrate development. , 1994, Development (Cambridge, England). Supplement.
[47] B. Magasanik,et al. Sequence and expression of GLN3, a positive nitrogen regulatory gene of Saccharomyces cerevisiae encoding a protein with a putative zinc finger DNA-binding domain , 1991, Molecular and cellular biology.
[48] T. Quertermous,et al. Cooperative interaction of GATA-2 and AP1 regulates transcription of the endothelin-1 gene , 1995, Molecular and cellular biology.
[49] I. Grosse,et al. MEASURING CORRELATIONS IN SYMBOL SEQUENCES , 1995 .
[50] W. Gilbert,et al. The exon theory of genes. , 1987, Cold Spring Harbor symposia on quantitative biology.
[51] A M Gronenborn,et al. The solution structure of the Leu22-->Val mutant AREA DNA binding domain complexed with a TGATAG core element defines a role for hydrophobic packing in the determination of specificity. , 1998, Journal of molecular biology.
[52] A M Gronenborn,et al. NMR structure of a specific DNA complex of Zn-containing DNA binding domain of GATA-1. , 1993, Science.
[53] S. Carroll,et al. Early animal evolution: emerging views from comparative biology and geology. , 1999, Science.
[54] J. Thompson,et al. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.
[55] László Patthy,et al. Protein Evolution by Exon-Shuffling , 1995 .
[56] D. Wilson,et al. The GATA-4 transcription factor transactivates the cardiac muscle-specific troponin C promoter-enhancer in nonmuscle cells , 1994, Molecular and cellular biology.
[57] S. Orkin,et al. Increased γ-globin expression in a nondeletion HPFH mediated by an erythroid-specif ic DNA-binding factor , 1989, Nature.
[58] Ramón Román-Roldán,et al. Application of information theory to DNA sequence analysis: A review , 1996, Pattern Recognit..
[59] A. Michelson,et al. A molecular aspect of hematopoiesis and endoderm development common to vertebrates and Drosophila. , 1996, Development.
[60] J. Mackay,et al. The solution structure of the N-terminal zinc finger of GATA-1 reveals a specific binding face for the transcriptional co-factor FOG , 1999, Journal of biomolecular NMR.