A Spectral Method for Aggregating Variables in Linear Dynamical Systems with Application to Cellular Automata Renormalization

We present a method for identifying coarse-grained dynamics through aggregation of variables or states in linear dynamical systems. The condition for aggregation is expressed as a permutation symmetry of a set of dual eigenvectors of the matrix that defines the dynamics. The applicability of the condition is illustrated in examples from three different generic classes of reducible Markov chains: systems consisting of independent subsystems, dynamics with symmetries, and nearly decoupled Markov chains. Furthermore we show how the method can be used to coarse-grain cellular automata.

[1]  Pamela G. Coxson,et al.  Lumpability and Observability of Linear Systems , 1984 .

[2]  Peter F. Stadler,et al.  Aggregation of variables and system decomposition: Applications to fitness landscape analysis , 2004, Theory in Biosciences.

[3]  James Ledoux,et al.  Author manuscript, published in "Statistics and Probability Letters 25 (1995) 329-339" On Weak Lumpability of Denumerable Markov Chains , 2013 .

[4]  Pierre Auger,et al.  Aggregation and emergence in hierarchically organized systems: population dynamics , 1996 .

[5]  Herschel Rabitz,et al.  The Effect of Lumping and Expanding on Kinetic Differential Equations , 1997, SIAM J. Appl. Math..

[6]  M E J Newman,et al.  Modularity and community structure in networks. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[7]  James P. Crutchfield,et al.  Geometry from a Time Series , 1980 .

[8]  Herschel Rabitz,et al.  A general analysis of exact lumping in chemical kinetics , 1989 .

[9]  Olof Görnerup,et al.  A Method for Inferring Hierarchical Dynamics in Stochastic Processes , 2007, Adv. Complex Syst..

[10]  P. Deuflhard,et al.  Identification of almost invariant aggregates in reversible nearly uncoupled Markov chains , 2000 .

[11]  Stephen Wolfram,et al.  Universality and complexity in cellular automata , 1983 .

[12]  Alden H. Wright,et al.  State Aggregation and Population Dynamics in Linear Systems , 2005, Artificial Life.

[13]  Alex Pothen,et al.  PARTITIONING SPARSE MATRICES WITH EIGENVECTORS OF GRAPHS* , 1990 .

[14]  Giuliana Franceschinis,et al.  On the use of partial symmetries for lumping Markov chains , 2001, PERV.

[15]  G. A. Baker The Markov property method applied to Ising model calculations , 1994 .

[16]  Frederick W. Leysieffer,et al.  WEAK LUMPABILITY IN FINITE MARKOV CHAINS , 1982 .

[17]  Peter Buchholz,et al.  Hierarchical Markovian Models: Symmetries and Reduction , 1995, Perform. Evaluation.

[18]  Sharipov Felix Boltzmann方程式と気体表面相互作用に基づくOnsager‐Casimir相反関係と:単一気体 , 2006 .