Virulence Profiles of Diarrheagenic Escherichia coli Isolated from the Western Region of Ghana

Diarrhea is one of the most common health complaints, especially in young children, with nearly 1.7 billion cases of childhood diarrheal diseases occur every year (1). Children younger than 5 years of age are especially vulnerable, with those from sub-Saharan Africa and South Asia recording the highest mortality burden (2). In Ghana, the mortality rate is 25% in children under the age of 5 years, with more than 9 million episodes of diarrhea every year (3). Because of its fecal-oral transmission, poor hygiene and unsanitary conditions that prevail in resource-limited areas contribute to their vulnerability to infectious diarrhea (4). The introduction of rotavirus vaccines has been helpful in reducing the burden of rotavirus-induced diarrhea. However, this reduction has caused a proportional increase in the burden of non-viral pathogens (5): enterotoxigenic E. coli (ETEC), a diarrhoeagenic Escherichia coli (DEC), and Shigella spp. are the major bacteria causing childhood diarrhea in sub-Saharan Africa and South Asia (5). Other DEC subtypes include enteropathogenic E. coli (EPEC), enterohemorrhagic E. coli (EHEC)/Shiga toxin-producing E. coli (STEC), enteroaggregative E. coli (EAEC), and enteroinvasive E. coli (EIEC), classified according to their virulence factors (6) and are associated with intestinal disease. These pathotypes also differ in their mechanisms of infection, clinical presentation, and colonization sites (7,8). Interestingly, the distribution and genetic diversity of DEC isolates vary even within the same country (9–11). Strains of DEC are constantly evolving through horizontal transfer of mobile genetic elements (12), and have emerged as a significant cause of outbreak infections, necessitating regular surveillance. Although some studies have described the distribution of DEC pathotypes in some parts of Ghana, there have been no such reports from its Western region (13–15). Specifically, there is a dearth of data on DEC genotypes, their associated virulence factors, and serotypes in Ghana partly because these pathogens are not routinely Original Article

[1]  D. Cohen,et al.  Improved Detection of Shigella Species in Diarrheic Children in Ghana Using Invasion Plasmid Antigen H-based Polymerase Chain Reaction Technique , 2019, International Journal of Microbiology and Biotechnology.

[2]  J. Álvarez,et al.  Diarrheagenic Escherichia coli Pathotypes From Children Younger Than 5 Years in Kano State, Nigeria , 2019, Front. Public Health.

[3]  Qiangde Duan,et al.  Review of Newly Identified Functions Associated With the Heat-Labile Toxin of Enterotoxigenic Escherichia coli , 2019, Front. Cell. Infect. Microbiol..

[4]  T. H. Nguyen,et al.  Estimates of the global, regional, and national morbidity, mortality, and aetiologies of diarrhoea in 195 countries: a systematic analysis for the Global Burden of Disease Study 2016 , 2018, The Lancet. Infectious diseases.

[5]  S. Baker,et al.  Recent insights into Shigella: a major contributor to the global diarrhoeal disease burden , 2018, Current opinion in infectious diseases.

[6]  Yongxin Ma,et al.  Virulence gene profiles and molecular genetic characteristics of diarrheagenic Escherichia coli from a hospital in western China , 2018, Gut Pathogens.

[7]  Sudhir Kumar,et al.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. , 2018, Molecular biology and evolution.

[8]  S. Iyoda,et al.  Escherichia coli H-Genotyping PCR: a Complete and Practical Platform for Molecular H Typing , 2018, Journal of Clinical Microbiology.

[9]  Baohong Wang,et al.  Prevalence and genetic diversity of human diarrheagenic Escherichia coli isolates by multilocus sequence typing. , 2018, International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases.

[10]  N. Thomson,et al.  An untypeable enterotoxigenic Escherichia coli represents one of the dominant types causing human disease , 2017, Microbial genomics.

[11]  N. Boisen,et al.  Genetic Virulence Profile of Enteroaggregative Escherichia coli Strains Isolated from Danish Children with Either Acute or Persistent Diarrhea , 2017, Front. Cell. Infect. Microbiol..

[12]  K. Holt,et al.  Are Escherichia coli Pathotypes Still Relevant in the Era of Whole-Genome Sequencing? , 2016, Front. Cell. Infect. Microbiol..

[13]  F. Navarro-Garcia,et al.  Pathogenic Lifestyles of E. coli Pathotypes in a Standardized Epithelial Cell Model Influence Inflammatory Signaling Pathways and Cytokines Secretion , 2016, Front. Cell. Infect. Microbiol..

[14]  Tetsuya Hayashi,et al.  Six Novel O Genotypes from Shiga Toxin-Producing Escherichia coli , 2016, Front. Microbiol..

[15]  M. Zeng,et al.  Clonal Spread of Enterotoxigenic Escherichia coli O128:H45 Strain in the Neonate Unit. , 2016, Japanese journal of infectious diseases.

[16]  S. Iyoda,et al.  Escherichia coli O-Genotyping PCR: a Comprehensive and Practical Platform for Molecular O Serogrouping , 2015, Journal of Clinical Microbiology.

[17]  A. Ayede,et al.  Hygiene and sanitation risk factors of diarrhoeal disease among under-five children in Ibadan, Nigeria. , 2015, African health sciences.

[18]  Y. Dong,et al.  Serotypes, genotypes and antimicrobial resistance patterns of human diarrhoeagenic Escherichia coli isolates circulating in southeastern China. , 2014, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[19]  B. Finlay,et al.  Recent Advances in Understanding Enteric Pathogenic Escherichia coli , 2013, Clinical Microbiology Reviews.

[20]  Inacio Mandomando,et al.  Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study , 2013, The Lancet.

[21]  C. R. Ahsan,et al.  A novel single-step multiplex polymerase chain reaction assay for the detection of diarrheagenic Escherichia coli. , 2013, Journal of microbiological methods.

[22]  M. Mielke,et al.  Outbreaks of virulent diarrheagenic Escherichia coli - are we in control? , 2012, BMC Medicine.

[23]  T. Ochoa,et al.  Enteropathogenic Escherichia coli infection in children , 2011, Current opinion in infectious diseases.

[24]  S. Vermund,et al.  Rotavirus Diarrhea Among Children Less Than 5 Years of Age in Urban Ghana , 2011, The Pediatric infectious disease journal.

[25]  J. Quinn,et al.  First Characterization of CTX-M-15-Producing Escherichia coli ST131 and ST405 Clones Causing Community-Onset Infections in South America , 2011, Journal of Clinical Microbiology.

[26]  R. Guerrant,et al.  Pediatric diarrhea in southern Ghana: etiology and association with intestinal inflammation and malnutrition. , 2010, The American journal of tropical medicine and hygiene.

[27]  I. Okeke,et al.  Carriage of diarrhoeagenic Escherichia coli by older children and adults in Accra, Ghana. , 2010, Transactions of the Royal Society of Tropical Medicine and Hygiene.

[28]  O. Gómez-Duarte,et al.  Molecular characterization of diarrheagenic Escherichia coli strains from stools samples and food products in Colombia. , 2010, International journal of food microbiology.

[29]  T. Honda,et al.  Identification of colonization factors of enterotoxigenic Escherichia coli with PCR-based technique , 2009, Epidemiology and Infection.

[30]  L. Carneiro,et al.  Phenotypic and genotypic characterisation of Escherichia coli strains serogrouped as enteropathogenic E. coli (EPEC) isolated from pasteurised milk. , 2006, International journal of food microbiology.

[31]  E. Frimpong,et al.  Prevalence of pathogenic Escherichia coli and parasites in infants with diarrhoea in Kumasi, Ghana. , 2004, East African medical journal.

[32]  D. Nadal,et al.  Prevalence of Enteroaggregative Escherichia coli among Children with and without Diarrhea in Switzerland , 2003, Journal of Clinical Microbiology.

[33]  A. Kai,et al.  An outbreak of gastroenteritis in Osaka, Japan due to Escherichia coli serogroup O166[ratio ]H15 that had a coding gene for enteroaggregative E. coli heat-stable enterotoxin 1 (EAST1) , 2002, Epidemiology and Infection.

[34]  M. Wolf,et al.  Occurrence, distribution, and associations of O and H serogroups, colonization factor antigens, and toxins of enterotoxigenic Escherichia coli , 1997, Clinical microbiology reviews.

[35]  S. Arai,et al.  Enteropathogenic and enterotoxigenic Escherichia coli as aetiological factors of infantile diarrhoea in rural and urban Ghana. , 1988, Transactions of the Royal Society of Tropical Medicine and Hygiene.

[36]  C. Dolea,et al.  World Health Organization , 1949, International Organization.