Mechanism of Phosphorylation-Dependent Binding of APC to β-Catenin and Its Role in β-Catenin Degradation

Abstract The transcriptional coactivator β-catenin mediates Wnt growth factor signaling. In the absence of a Wnt signal, casein kinase 1 (CK1) and glycogen synthase kinase-3β (GSK-3β) phosphorylate cytosolic β-catenin, thereby flagging it for recognition and destruction by the ubiquitin/proteosome machinery. Phosphorylation occurs in a multiprotein complex that includes the kinases, β-catenin, axin, and the Adenomatous Polyposis Coli (APC) protein. The role of APC in this process is poorly understood. CK1ϵ and GSK-3β phosphorylate APC, which increases its affinity for β-catenin. Crystal structures of phosphorylated and nonphosphoryated APC bound to β-catenin reveal a phosphorylation-dependent binding motif generated by mutual priming of CK1 and GSK-3β substrate sequences. Axin is shown to act as a scaffold for substrate phosphorylation by these kinases. Phosphorylated APC and axin bind to the same surface of, and compete directly for, β-catenin. The structural and biochemical data suggest a novel model for how APC functions in β-catenin degradation.

[1]  Xi He,et al.  Control of β-Catenin Phosphorylation/Degradation by a Dual-Kinase Mechanism , 2002, Cell.

[2]  R J Read,et al.  Crystallography & NMR system: A new software suite for macromolecular structure determination. , 1998, Acta crystallographica. Section D, Biological crystallography.

[3]  Laurence H. Pearl,et al.  Crystal Structure of Glycogen Synthase Kinase 3β Structural Basis for Phosphate-Primed Substrate Specificity and Autoinhibition , 2001, Cell.

[4]  Yukihiro Matsuda,et al.  Casein kinase I phosphorylates the Armadillo protein and induces its degradation in Drosophila , 2002, The EMBO journal.

[5]  T. A. Graham,et al.  Crystal Structure of a β-Catenin/Tcf Complex , 2000, Cell.

[6]  P. Polakis,et al.  Loss of beta-catenin regulation by the APC tumor suppressor protein correlates with loss of structure due to common somatic mutations of the gene. , 1997, Cancer research.

[7]  Jorge Navaza,et al.  [33] AMoRe: An automated molecular replacement program package. , 1997, Methods in enzymology.

[8]  H. Yost,et al.  Protein phosphatase 2A and its B56 regulatory subunit inhibit Wnt signaling in Xenopus , 2001, The EMBO journal.

[9]  William I. Weis,et al.  Three-Dimensional Structure of the Armadillo Repeat Region of β-Catenin , 1997, Cell.

[10]  W. Weis,et al.  The cytoplasmic face of cell contact sites. , 2002, Current opinion in structural biology.

[11]  D. Laurents,et al.  The cadherin cytoplasmic domain is unstructured in the absence of beta-catenin. A possible mechanism for regulating cadherin turnover. , 2001, The Journal of biological chemistry.

[12]  W. Weis,et al.  Molecular mechanisms of β‐catenin recognition by adenomatous polyposis coli revealed by the structure of an APC–β‐catenin complex , 2001, The EMBO journal.

[13]  A. Bauer,et al.  Casein Kinase II Phosphorylation of E-cadherin Increases E-cadherin/β-Catenin Interaction and Strengthens Cell-Cell Adhesion* , 2000, The Journal of Biological Chemistry.

[14]  Walter Birchmeier,et al.  Hot spots in β-catenin for interactions with LEF-1, conductin and APC , 2000, Nature Structural Biology.

[15]  William I. Weis,et al.  The Structure of the β-Catenin/E-Cadherin Complex and the Molecular Basis of Diverse Ligand Recognition by β-Catenin , 2001, Cell.

[16]  H. Yost,et al.  Regulation of Casein Kinase Iϵ Activity by Wnt Signaling* , 2004, Journal of Biological Chemistry.

[17]  P. Polakis,et al.  Axin-dependent Phosphorylation of the Adenomatous Polyposis Coli Protein Mediated by Casein Kinase 1ε* , 2001, The Journal of Biological Chemistry.

[18]  T. Baker,et al.  ClpX-mediated remodeling of mu transpososomes: selective unfolding of subunits destabilizes the entire complex. , 2001, Molecular cell.

[19]  D. Virshup,et al.  Autoinhibition of Casein Kinase I ε (CKIε) Is Relieved by Protein Phosphatases and Limited Proteolysis* , 1998, The Journal of Biological Chemistry.

[20]  Marc W. Kirschner,et al.  Physiological regulation of β-catenin stability by Tcf3 and CK1ε , 2001, The Journal of cell biology.

[21]  D. Kimelman,et al.  Crystal structure of a beta-catenin/axin complex suggests a mechanism for the beta-catenin destruction complex. , 2003, Genes & Development.

[22]  W. Weis,et al.  ICAT inhibits beta-catenin binding to Tcf/Lef-family transcription factors and the general coactivator p300 using independent structural modules. , 2002, Molecular cell.

[23]  J. Graff,et al.  Casein kinase I transduces Wnt signals , 1999, Nature.

[24]  T. Iwatsubo,et al.  Biochemical Characterization of the Drosophila Wingless Signaling Pathway Based on RNA Interference , 2004, Molecular and Cellular Biology.

[25]  Raymond L. White,et al.  Regulation of β-Catenin Signaling by the B56 Subunit of Protein Phosphatase 2A , 1999 .

[26]  C. Herrmann,et al.  Differences between the interaction of beta-catenin with non-phosphorylated and single-mimicked phosphorylated 20-amino acid residue repeats of the APC protein. , 2003, Journal of molecular biology.

[27]  H. Clevers,et al.  Linking Colorectal Cancer to Wnt Signaling , 2000, Cell.

[28]  L. Pearl,et al.  Structural basis for recruitment of glycogen synthase kinase 3β to the axin—APC scaffold complex , 2003, The EMBO journal.

[29]  Paul Polakis,et al.  Binding of GSK3β to the APC-β-Catenin Complex and Regulation of Complex Assembly , 1996, Science.

[30]  D. Virshup,et al.  Casein kinase I phosphorylates and destabilizes the β-catenin degradation complex , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[31]  Matthias Mann,et al.  Axin-mediated CKI phosphorylation of beta-catenin at Ser 45: a molecular switch for the Wnt pathway. , 2002, Genes & development.

[32]  D. M. Ferkey,et al.  Tcf4 can specifically recognize β-catenin using alternative conformations , 2001, Nature Structural Biology.

[33]  D. Barford Molecular mechanisms of the protein serine/threonine phosphatases. , 1996, Trends in biochemical sciences.

[34]  P. Cohen,et al.  A common phosphate binding site explains the unique substrate specificity of GSK3 and its inactivation by phosphorylation. , 2001, Molecular Cell.

[35]  Reinhart Heinrich,et al.  The Roles of APC and Axin Derived from Experimental and Theoretical Analysis of the Wnt Pathway , 2003, PLoS biology.

[36]  L. Cesaro,et al.  A noncanonical sequence phosphorylated by casein kinase 1 in β-catenin may play a role in casein kinase 1 targeting of important signaling proteins , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[37]  Paul Polakis,et al.  Stabilization of β-Catenin by Genetic Defects in Melanoma Cell Lines , 1997, Science.

[38]  T. A. Graham,et al.  The crystal structure of the beta-catenin/ICAT complex reveals the inhibitory mechanism of ICAT. , 2002, Molecular cell.

[39]  T. Dale,et al.  An assay for glycogen synthase kinase 3 (GSK-3) for use in crude cell extracts. , 1998, Analytical biochemistry.

[40]  L. Williams,et al.  Casein kinase iepsilon in the wnt pathway: regulation of beta-catenin function. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[41]  Michael J. Eck,et al.  Structure of a human Tcf4–β-catenin complex , 2001, Nature Structural Biology.

[42]  Z. Otwinowski,et al.  [20] Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.

[43]  R. Benarous,et al.  The F-box protein β-TrCP associates with phosphorylated β-catenin and regulates its activity in the cell , 1999, Current Biology.

[44]  P. Polakis Wnt signaling and cancer. , 2000, Genes & development.