Negative Clonal Selection in Tumor Evolution

Development of cancer requires the acquisition of multiple oncogenic mutations and selection of the malignant clone. Cancer evolves within a finite host lifetime and mechanisms of carcinogenesis that accelerate this process may be more likely to contribute to the development of clinical cancers. Mutator mutations are mutations that affect genome stability and accelerate the acquisition of oncogenic mutations. However, mutator mutations will also accelerate the accumulation of mutations that decrease cell proliferation, increase apoptosis, or affect other key fitness parameters. These “reduced-fitness” mutations may mediate “negative clonal selection,” i.e., selective elimination of premalignant mutator clones. Target reduced-fitness loci may be “recessive” (both copies must be mutated to reduce fitness) or “dominant” (single-copy mutation reduces fitness). A direct mathematical analysis is applied to negative clonal selection, leading to the conclusion that negative clonal selection against mutator clones is unlikely to be a significant effect under realistic conditions. In addition, the relative importance of dominant and recessive reduced-fitness mutations is quantitatively defined. The relative predominance of mutator mutations in clinical cancers will depend on several variables, including the tolerance of the genome for reduced-fitness mutations, particularly the number and potency of dominant reduced-fitness loci.

[1]  J. Bielas,et al.  Quantification of random genomic mutations , 2005, Nature Methods.

[2]  E. Lander,et al.  Finishing the euchromatic sequence of the human genome , 2004 .

[3]  J. Bonfield,et al.  Finishing the euchromatic sequence of the human genome , 2004, Nature.

[4]  Juno Choe,et al.  Protein tolerance to random amino acid change. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[5]  M. Nowak,et al.  Stochastic Tunnels in Evolutionary Dynamics , 2004, Genetics.

[6]  T. Hubbard,et al.  A census of human cancer genes , 2004, Nature Reviews Cancer.

[7]  D. Wodarz,et al.  Evolutionary dynamics of mutator phenotypes in cancer: implications for chemotherapy. , 2003, Cancer research.

[8]  Anirvan M. Sengupta,et al.  Mutation-selection networks of cancer initiation: tumor suppressor genes and chromosomal instability. , 2003, Journal of theoretical biology.

[9]  K. Loeb,et al.  Multiple mutations and cancer , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[10]  Martin A. Nowak,et al.  The role of chromosomal instability in tumor initiation , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[11]  F. McCormick,et al.  The RB and p53 pathways in cancer. , 2002, Cancer cell.

[12]  J. Stringer,et al.  Embryonic stem cells and somatic cells differ in mutation frequency and type , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[13]  W. Bodmer,et al.  How many mutations in a cancer? , 2002, The American journal of pathology.

[14]  R. Goldsby,et al.  Defective DNA polymerase-δ proofreading causes cancer susceptibility in mice , 2001, Nature Medicine.

[15]  Richard D. Wood,et al.  Human DNA Repair Genes , 2001, Science.

[16]  Patrick J. Lau,et al.  Checkpoint-dependent activation of mutagenic repair in Saccharomyces cerevisiae pol3-01 mutants. , 2000, Molecular cell.

[17]  Peter D. Keightley,et al.  High genomic deleterious mutation rates in hominids , 1999, Nature.

[18]  K. Kinzler,et al.  Genetic instabilities in human cancers , 1998, Nature.

[19]  A. Levine p53, the Cellular Gatekeeper for Growth and Division , 1997, Cell.

[20]  K. Jabboury,et al.  Cell proliferation kinetics of normal and tumour tissue in vitro: quiescent reproductive cells and the cycling reproductive fraction , 1995, Cell proliferation.

[21]  C Cruz,et al.  Genetic studies of the lac repressor. XIV. Analysis of 4000 altered Escherichia coli lac repressors reveals essential and non-essential residues, as well as "spacers" which do not require a specific sequence. , 1994, Journal of molecular biology.

[22]  N. Copeland,et al.  The human mutator gene homolog MSH2 and its association with hereditary nonpolyposis colon cancer , 1993, Cell.

[23]  L. Loeb,et al.  Multi-stage proofreading in DNA replication , 1993, Quarterly Reviews of Biophysics.

[24]  Darryl Shibata,et al.  Ubiquitous somatic mutations in simple repeated sequences reveal a new mechanism for colonic carcinogenesis , 1993, Nature.

[25]  L. Johnston,et al.  Pathway correcting DNA replication errors in Saccharomyces cerevisiae. , 1993, The EMBO journal.

[26]  L. Loeb,et al.  Mutator phenotype may be required for multistage carcinogenesis. , 1991, Cancer research.

[27]  H. Crissman,et al.  Cell cycle distribution patterns and generation times of L929 fibroblast cells persistently infected with Coxiella burnetii , 1985, Infection and immunity.

[28]  S H Moolgavkar,et al.  Mutation and cancer: a model for human carcinogenesis. , 1981, Journal of the National Cancer Institute.

[29]  P. Nowell The clonal evolution of tumor cell populations. , 1976, Science.

[30]  L. Loeb,et al.  Errors in DNA replication as a basis of malignant changes. , 1974, Cancer research.

[31]  A. Knudson Mutation and cancer: statistical study of retinoblastoma. , 1971, Proceedings of the National Academy of Sciences of the United States of America.

[32]  W. Feller An Introduction to Probability Theory and Its Applications , 1959 .

[33]  L. Loeb,et al.  Cancer cells exhibit a mutator phenotype. , 1998, Advances in cancer research.

[34]  R. Albertini,et al.  In vivo somatic mutations in humans: measurement and analysis. , 1990, Annual review of genetics.