Antisense snoRNAs: a family of nucleolar RNAs with long complementarities to rRNA.

A growing subset of small nucleolar RNAs (snoRNAs) contains long stretches of sequence complementarity to conserved sequences in mature ribosomal RNA (rRNA). This article reviews current knowledge about these complementarities and proposes that these antisense snoRNAs might function in pre-rRNA folding, base modification and ribosomal ribonucleoprotein assembly, in some cases acting as RNA chaperones.

[1]  J. Brown,et al.  Molecular characterisation of plant U14 small nucleolar RNA genes: closely linked genes are transcribed as polycistronic U14 transcripts. , 1994, Nucleic acids research.

[2]  M. Fournier,et al.  Accumulation of U14 small nuclear RNA in Saccharomyces cerevisiae requires box C, box D, and a 5', 3' terminal stem , 1992, Molecular and cellular biology.

[3]  J. Steitz,et al.  Requirement for intron-encoded U22 small nucleolar RNA in 18S ribosomal RNA maturation. , 1994, Science.

[4]  B. Sollner-Webb,et al.  Novel intron-encoded small nucleolar RNAs , 1993, Cell.

[5]  D. Tollervey,et al.  Birth of the snoRNPs: the evolution of RNase MRP and the eukaryotic pre-rRNA-processing system. , 1995, Trends in biochemical sciences.

[6]  J. Steitz,et al.  An intact Box C sequence in the U3 snRNA is required for binding of fibrillarin, the protein common to the major family of nucleolar snRNPs. , 1991, The EMBO journal.

[7]  R. W. Davis,et al.  Translation initiation and ribosomal biogenesis: involvement of a putative rRNA helicase and RPL46. , 1990, Science.

[8]  D Tollervey,et al.  Mutational analysis of an essential binding site for the U3 snoRNA in the 5' external transcribed spacer of yeast pre-rRNA. , 1994, Nucleic acids research.

[9]  J. Bachellerie,et al.  Alterations of nucleolar ultrastructure and ribosome biogenesis by actinomycin D. Implications for U3 snRNP function. , 1992, European journal of cell biology.

[10]  J. Steitz,et al.  U3, U8 and U13 comprise a new class of mammalian snRNPs localized in the cell nucleolus. , 1989, The EMBO journal.

[11]  I. Bozzoni,et al.  Two different snoRNAs are encoded in introns of amphibian and human L1 ribosomal protein genes. , 1993, Nucleic acids research.

[12]  I. Bozzoni,et al.  A novel small nucleolar RNA (U16) is encoded inside a ribosomal protein intron and originates by processing of the pre‐mRNA. , 1993, The EMBO journal.

[13]  P. Dennis,et al.  Ribosomal RNA precursor processing by a eukaryotic U3 small nucleolar RNA-like molecule in an archaeon. , 1995, Science.

[14]  J. Steitz,et al.  A small nucleolar RNA is processed from an intron of the human gene encoding ribosomal protein S3. , 1993, Genes & development.

[15]  J. Bachellerie,et al.  U20, a novel small nucleolar RNA, is encoded in an intron of the nucleolin gene in mammals , 1994, Molecular and cellular biology.

[16]  D. Tollervey,et al.  Characterization of an SNR gene locus in Saccharomyces cerevisiae that specifies both dispensible and essential small nuclear RNAs , 1988, Molecular and cellular biology.

[17]  A. Jarmołowski,et al.  Identification of essential elements in U14 RNA of Saccharomyces cerevisiae. , 1990, The EMBO journal.

[18]  J. Bachellerie,et al.  U21, a novel small nucleolar RNA with a 13 nt. complementarity to 28S rRNA, is encoded in an intron of ribosomal protein L5 gene in chicken and mammals. , 1994, Nucleic acids research.

[19]  E. Maxwell,et al.  Mouse U14 snRNA is a processed intron of the cognate hsc70 heat shock pre-messenger RNA , 1992, Cell.

[20]  K. A. Amiri Fibrillarin-like proteins occur in the domain Archaea , 1994, Journal of bacteriology.

[21]  D. Tollervey,et al.  Temperature-sensitive mutations demonstrate roles for yeast fibrillarin in pre-rRNA processing, pre-rRNA methylation, and ribosome assembly , 1993, Cell.

[22]  J Ofengand,et al.  Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: analysis by the application of a new sequencing technique. , 1993, Biochemistry.

[23]  H. Madhani,et al.  Dynamic RNA-RNA interactions in the spliceosome. , 1994, Annual review of genetics.

[24]  B. Maden The numerous modified nucleotides in eukaryotic ribosomal RNA. , 1990, Progress in nucleic acid research and molecular biology.

[25]  M. Fournier,et al.  Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiae. , 1990, Molecular and cellular biology.

[26]  M. Fournier,et al.  The nucleolar snRNAs: catching up with the spliceosomal snRNAs. , 1993, Trends in biochemical sciences.

[27]  J. Bachellerie,et al.  Secondary structure of mouse 28S rRNA and general model for the folding of the large rRNA in eukaryotes. , 1984, Nucleic acids research.