Amplification Methods to Increase the Sensitivity of In Situ Hybridization: Play CARD(S)

In situ hybridization (ISH) has proved to be an invaluable molecular tool in research and diagnosis to visualize nucleic acids in their cellular environment. However, its applicability can be limited by its restricted detection sensitivity. During the past 10 years, several strategies have been developed to improve the threshold levels of nucleic acid detection in situ by amplification of either target nucleic acid sequences before ISH (e.g., in situ PCR) or the detection signals after the hybridization procedures. Here we outline the principles of tyramide signal amplification using the catalyzed reporter deposition (CARD) technique, present practical suggestions to efficiently enhance the sensitivity of ISH with CARD, and discuss some applications and possible future directions of in situ nucleic acid detection using such an amplification strategy.

[1]  P. Komminoth,et al.  In-situ polymerase chain reaction , 1993, Virchows Archiv. B, Cell pathology including molecular pathology.

[2]  A. Mcnicol,et al.  In Situ hybridization and its diagnostic applications in pathology , 1997, The Journal of pathology.

[3]  E. Speel,et al.  In Situ Hybridization and Comparative Genomic Hybridization , 1997 .

[4]  F. Muhale,et al.  [Amplification of immunologic reactions using catalytic deposition at the reaction sites of tyramine derivatives. A decisive gain in sensitivity in immunohistochemistry and in situ hybridization]. , 1997, Annales de Pathologie.

[5]  E. Speel,et al.  Improved mRNA in situ hybridization on formaldehyde-fixed and paraffin-embedded tissue using signal amplification with different haptenized tyramides , 1998, Histochemistry and Cell Biology.

[6]  K A Giuliano,et al.  Immunofluorescence signal amplification by the enzyme-catalyzed deposition of a fluorescent reporter substrate (CARD). , 1996, Cytometry.

[7]  H. Merz,et al.  ImmunoMax. A maximized immunohistochemical method for the retrieval and enhancement of hidden antigens. , 1995, Laboratory investigation; a journal of technical methods and pathology.

[8]  J. Wiegant,et al.  Ultra-sensitive FISH using peroxidase-mediated deposition of biotin- or fluorochrome tyramides. , 1995, Human molecular genetics.

[9]  A. Haase,et al.  Amplification and detection of lentiviral DNA inside cells. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[10]  K. Zaitsu,et al.  New fluorogenic substrates for horseradish peroxidase: rapid and sensitive assays for hydrogen peroxide and the peroxidase. , 1980, Analytical biochemistry.

[11]  J. Hoyland,et al.  QUANTIFICATION OF VITAMIN D RECEPTOR mRNA IN TISSUE SECTIONS DEMONSTRATES THE RELATIVE LIMITATIONS OF IN SITU‐REVERSE TRANSCRIPTASE‐POLYMERASE CHAIN REACTION , 1997, The Journal of pathology.

[12]  H. McLeod,et al.  Amplification of fluorescent in situ hybridisation signals in formalin fixed paraffin wax embedded sections of colon tumour using biotinylated tyramide. , 1997, Molecular pathology : MP.

[13]  In situ amplification of measles virus RNA by the self-sustained sequence replication reaction. , 1995, Laboratory investigation; a journal of technical methods and pathology.

[14]  P. Lichter,et al.  Multicolor FISHing: what's the catch? , 1997, Trends in genetics : TIG.

[15]  J F Hainfeld,et al.  Sensitive in situ hybridization with catalyzed reporter deposition, streptavidin-Nanogold, and silver acetate autometallography: detection of single-copy human papillomavirus. , 1997, The American journal of pathology.

[16]  W. Melchers,et al.  In situ localisation of Yersinia enterocolitica by catalysed reported deposition signal amplification. , 1998, Journal of clinical pathology.

[17]  L. Bolund,et al.  Fast, sensitive multicolor detection of nucleic acids in situ by PRimed IN Situ labeling (PRINS). , 1994, Cytogenetics and cell genetics.

[18]  M N Bobrow,et al.  The use of catalyzed reporter deposition as a means of signal amplification in a variety of formats. , 1992, Journal of immunological methods.

[19]  J. Wiegant,et al.  Improved localization of fluorescent tyramides for fluorescence in situ hybridization using dextran sulfate and polyvinyl alcohol. , 1996, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[20]  K. Chiu,et al.  Intracellular amplification of proviral DNA in tissue sections using the polymerase chain reaction. , 1992, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[21]  E. Speel,et al.  Sensitive Multicolor Fluorescence In Situ Hybridization Using Catalyzed Reporter Deposition (CARD) Amplification , 1997, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[22]  E. Wilander,et al.  Pitfalls of in situ polymerase chain reaction (PCR) using direct incorporation of labelled nucleotides. , 1993, Anticancer research.

[23]  Tyramine-amplified immunohistochemical testing using "homemade" biotinylated tyramine is highly sensitive and cost-effective. , 1998, Archives of pathology & laboratory medicine.

[24]  O. Kallioniemi,et al.  Genome screening by comparative genomic hybridization. , 1997, Trends in genetics : TIG.

[25]  L. Tecott,et al.  In situ transcription: specific synthesis of complementary DNA in fixed tissue sections. , 1988, Science.

[26]  F S Fay,et al.  Visualization of single RNA transcripts in situ. , 1998, Science.

[27]  Joe C. Adams,et al.  Biotin amplification of biotin and horseradish peroxidase signals in histochemical stains. , 1992, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[28]  E. Cesarman,et al.  Demonstration of Kaposi's sarcoma-associated herpes virus cyclin D homolog in cutaneous Kaposi's sarcoma by colorimetric in situ hybridization using a catalyzed signal amplification system. , 1998, Blood.

[29]  J. Chao,et al.  Signal Amplification in the Detection of Single-copy DNA and RNA by Enzyme-catalyzed Deposition (CARD) of the Novel Fluorescent Reporter Substrate Cy3.29-Tyramide , 1997, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[30]  I. Lauder,et al.  Flow cytometric quantitation of sequence-specific mRNA in hemopoietic cell suspensions by primer-induced in situ (PRINS) fluorescent nucleotide labeling. , 1993, Experimental cell research.

[31]  F. Ramaekers,et al.  Fluorescein-labeled Tyramide Strongly Enhances the Detection of Low Bromodeoxyuridine Incorporation Levels , 1997, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[32]  H. Tanke,et al.  The use of peroxidase-mediated deposition of biotin-tyramide in combination with time-resolved fluorescence imaging of europium chelate label in immunohistochemistry and in situ hybridization. , 1996, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[33]  A. Hanselaar,et al.  A novel in situ hybridization signal amplification method based on the deposition of biotinylated tyramine. , 1995, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[34]  M N Bobrow,et al.  Catalyzed reporter deposition, a novel method of signal amplification. II. Application to membrane immunoassays. , 1991, Journal of immunological methods.

[35]  E. Speel,et al.  Signal amplification for DNA and mRNA. , 2000, Methods in molecular biology.

[36]  L. Alexander,et al.  Use of direct in situ single-copy (DISC) PCR to physically map five porcine microsatellites. , 1994, Cytogenetics and cell genetics.

[37]  L. Bolund,et al.  Repeated primed in situ labeling: formation and labeling of specific DNA sequences in chromosomes and nuclei. , 1993, Cytogenetics and cell genetics.

[38]  Rapid bright-field detection of oligonucleotide primed in situ (PRINS)-labeled DNA in chromosome preparations and frozen tissue sections. , 1996, BioTechniques.

[39]  L. Jin,et al.  Microwave Treatment Enhances Detection of RNA and DNA by In Situ Hybridization , 1996, Diagnostic molecular pathology : the American journal of surgical pathology, part B.

[40]  S. Fuggle,et al.  In situ cDNA polymerase chain reaction. A novel technique for detecting mRNA expression. , 1993, The American journal of pathology.

[41]  J. Pastore,et al.  A Rapid Immunoenzyme Double Labeling Technique Using EPOS Reagents , 1995 .

[42]  M. Werner,et al.  Target and signal amplification: approaches to increase the sensitivity of in situ hybridization , 1997, Histochemistry and Cell Biology.

[43]  G. Mayer,et al.  Biotinyl–Tyramide: A Novel Approach for Electron Microscopic Immunocytochemistry , 1997, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[44]  J. Gosden,et al.  PCR in situ: a rapid alternative to in situ hybridization for mapping short, low copy number sequences without isotopes. , 1993, BioTechniques.

[45]  A. Matsushima,et al.  A strategy for immunohistochemical signal enhancement by end-product amplification. , 1996, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[46]  G. Nuovo PCR in situ hybridization. , 1994, Methods in molecular biology.

[47]  R. Osamura,et al.  Application of catalyzed signal amplification in immunodetection of gonadotropin subunits in clinically nonfunctioning pituitary adenomas. , 1996, American journal of clinical pathology.

[48]  E. Speel,et al.  Rapid Synthesis of Biotin-, Digoxigenin-, Trinitrophenyl-, and Fluorochrome-labeled Tyramides and Their Application for In Situ Hybridization Using CARD Amplification , 1998, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[49]  G. Nuovo,et al.  PCR in situ hybridization. , 1994, Methods in molecular biology.

[50]  J. Wiegant,et al.  Horseradish peroxidase-labeled oligonucleotides and fluorescent tyramides for rapid detection of chromosome-specific repeat sequences. , 1996, Cytogenetics and cell genetics.

[51]  M. Werner,et al.  Tyramine Amplification Technique in Routine Immunohistochemistry , 1997, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[52]  L. Bolund,et al.  Nonradioactive, sequence-specific detection of RNA in situ by primed in situ labeling (PRINS). , 1991, Experimental cell research.

[53]  S. Erlandsen,et al.  Comparison of Immunologic Amplification vs Enzymatic Deposition of Fluorochrome-conjugated Tyramide as Detection Systems for FISH , 1997, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[54]  K. Cooper,et al.  Human papilloma virus detection by in situ hybridisation signal amplification based on biotinylated tyramine deposition. , 1997, Molecular pathology : MP.

[55]  P. Komminoth,et al.  In Situ PCR , 1997 .

[56]  M. Almeder,et al.  Signal amplification at the ultrastructural level using biotinylated tyramides and immunogold detection , 1997, Histochemistry and Cell Biology.

[57]  K. Roth,et al.  Double immunofluorescent staining using two unconjugated primary antisera raised in the same species. , 1996, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[58]  Hans J. Tanke,et al.  Fluorochrome-labeled Tyramides: Use in Immunocytochemistry and Fluorescence In Situ Hybridization , 1997, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[59]  F. Bloom,et al.  Enhanced sensitivity for light and electron microscopic in situ hybridization with multiple simultaneous non-radioactive oligodeoxynucleotide probes. , 1995, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[60]  R. Chetty,et al.  REVIEW ARTICLE. IN SITU PCR: PATHOLOGIST'S DREAM OR NIGHTMARE? , 1996 .

[61]  P. Komminoth,et al.  Evaluation of methods for hepatitis C virus detection in archival liver biopsies. Comparison of histology, immunohistochemistry, in-situ hybridization, reverse transcriptase polymerase chain reaction (RT-PCR) and in-situ RT-PCR. , 1994, Pathology, research and practice.

[62]  M. Bobrow,et al.  High sensitivity detection of HPV-16 in SiHa and CaSki cells utilizing FISH enhanced by TSA , 1997, Histochemistry and Cell Biology.

[63]  G. Hoffman,et al.  cFos immunoreactivity is enhanced with biotin amplification. , 1994, The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society.

[64]  T. Harris,et al.  Catalyzed reporter deposition, a novel method of signal amplification. Application to immunoassays. , 1989, Journal of immunological methods.