Toward more realistic projections of soil carbon dynamics by Earth system models

Soil carbon (C) is a critical component of Earth system models (ESMs), and its diverse representations are a major source of the large spread across models in the terrestrial C sink from the third to fifth assessment reports of the Intergovernmental Panel on Climate Change (IPCC). Improving soil C projections is of a high priority for Earth system modeling in the future IPCC and other assessments. To achieve this goal, we suggest that (1) model structures should reflect real‐world processes, (2) parameters should be calibrated to match model outputs with observations, and (3) external forcing variables should accurately prescribe the environmental conditions that soils experience. First, most soil C cycle models simulate C input from litter production and C release through decomposition. The latter process has traditionally been represented by first‐order decay functions, regulated primarily by temperature, moisture, litter quality, and soil texture. While this formulation well captures macroscopic soil organic C (SOC) dynamics, better understanding is needed of their underlying mechanisms as related to microbial processes, depth‐dependent environmental controls, and other processes that strongly affect soil C dynamics. Second, incomplete use of observations in model parameterization is a major cause of bias in soil C projections from ESMs. Optimal parameter calibration with both pool‐ and flux‐based data sets through data assimilation is among the highest priorities for near‐term research to reduce biases among ESMs. Third, external variables are represented inconsistently among ESMs, leading to differences in modeled soil C dynamics. We recommend the implementation of traceability analyses to identify how external variables and model parameterizations influence SOC dynamics in different ESMs. Overall, projections of the terrestrial C sink can be substantially improved when reliable data sets are available to select the most representative model structure, constrain parameters, and prescribe forcing fields.

[1]  Jizhong Zhou,et al.  Soil properties control decomposition of soil organic carbon: Results from data-assimilation analysis , 2016 .

[2]  Nate G. McDowell,et al.  Taking off the training wheels: the properties of a dynamic vegetation model without climate envelopes, CLM4.5(ED) , 2015 .

[3]  J. Balesdent,et al.  Deep soil carbon dynamics are driven more by soil type than by climate: a worldwide meta‐analysis of radiocarbon profiles , 2015, Global change biology.

[4]  Dejun Li,et al.  Experimental warming altered rates of carbon processes, allocation, and carbon storage in a tallgrass prairie , 2015 .

[5]  M. M. Mueller,et al.  Model structure and parameter identification of soil organic matter models , 2015 .

[6]  Yujie He,et al.  Explicitly representing soil microbial processes in Earth system models , 2015 .

[7]  J. Six,et al.  Soil carbon storage controlled by interactions between geochemistry and climate , 2015 .

[8]  Matthew J. Smith,et al.  Responses of two nonlinear microbial models to warming and increased carbon input , 2015 .

[9]  Pierre Friedlingstein,et al.  Controls on terrestrial carbon feedbacks by productivity versus turnover in the CMIP5 Earth System Models , 2015 .

[10]  S. Gerber,et al.  Comparing models of microbial–substrate interactions and their response to warming , 2015 .

[11]  T. Keitt,et al.  Resilience vs. historical contingency in microbial responses to environmental change. , 2015, Ecology letters.

[12]  G. Heuvelink,et al.  Mapping Soil Properties of Africa at 250 m Resolution: Random Forests Significantly Improve Current Predictions , 2015, PloS one.

[13]  G. Bonan,et al.  Representing life in the Earth system with soil microbial functional traits in the MIMICS model , 2015 .

[14]  Matthew J. Smith,et al.  Microbial models with data‐driven parameters predict stronger soil carbon responses to climate change , 2015, Global change biology.

[15]  Atul K. Jain,et al.  Global patterns and controls of soil organic carbon dynamics as simulated by multiple terrestrial biosphere models: Current status and future directions , 2015, Global biogeochemical cycles.

[16]  Benjamin Smith,et al.  Importance of vegetation dynamics for future terrestrial carbon cycling , 2015 .

[17]  Petr Baldrian,et al.  Biotic interactions mediate soil microbial feedbacks to climate change , 2015, Proceedings of the National Academy of Sciences.

[18]  E. Bai,et al.  Representation of nitrogen in climate change forecasts , 2015 .

[19]  E. Blagodatskaya,et al.  Microbial hotspots and hot moments in soil: Concept & review , 2015 .

[20]  Huimin Wang,et al.  Complementarity of flux- and biometric-based data to constrain parameters in a terrestrial carbon model , 2015 .

[21]  E. Davidson,et al.  Sensitivity of decomposition rates of soil organic matter with respect to simultaneous changes in temperature and moisture , 2015 .

[22]  C. Webb,et al.  Scaling from Traits to Ecosystems: Developing a General Trait Driver Theory via Integrating Trait-Based and Metabolic Scaling Theories , 2015, 1502.06629.

[23]  P. Blanken,et al.  Joint control of terrestrial gross primary productivity by plant phenology and physiology , 2015, Proceedings of the National Academy of Sciences.

[24]  Ranga B. Myneni,et al.  Recent trends and drivers of regional sources and sinks of carbon dioxide , 2015 .

[25]  D. Moorhead,et al.  Scaling microbial biomass, metabolism and resource supply , 2015, Biogeochemistry.

[26]  Eric A Davidson,et al.  A big‐microsite framework for soil carbon modeling , 2014, Global change biology.

[27]  Richard P. Phillips,et al.  Microbe-driventurnoverosetsminer al-mediated storage of soil carbon under elevated CO 2 , 2014 .

[28]  Yiqi Luo,et al.  Improvement of global litter turnover rate predictions using a Bayesian MCMC approach , 2014 .

[29]  A. Pitman,et al.  Response of microbial decomposition to spin-up explains CMIP5 soil carbon range until 2100 , 2014 .

[30]  G. Katul,et al.  Invariant soil water potential at zero microbial respiration explained by hydrological discontinuity in dry soils , 2014 .

[31]  S. Allison Modeling adaptation of carbon use efficiency in microbial communities , 2014, Front. Microbiol..

[32]  Paul Dijkstra,et al.  Accelerated microbial turnover but constant growth efficiency with warming in soil , 2014 .

[33]  K. Oleson,et al.  Modeling stomatal conductance in the earth system: linking leaf water-use efficiency and water transport along the soil–plant–atmosphere continuum , 2014 .

[34]  R. V. Rossel,et al.  Australian net (1950s–1990) soil organic carbon erosion: implications for CO 2 emission and land–atmosphere modelling , 2014 .

[35]  G. Niu,et al.  Assessing five evolving microbial enzyme models against field measurements from a semiarid savannah—What are the mechanisms of soil respiration pulses? , 2014 .

[36]  Maurizio Santoro,et al.  Global covariation of carbon turnover times with climate in terrestrial ecosystems , 2014, Nature.

[37]  William R. Wieder,et al.  Regridded Harmonized World Soil Database v1.2 , 2014 .

[38]  D. Moorhead,et al.  Extracellular enzyme kinetics scale with resource availability , 2014, Biogeochemistry.

[39]  N. Salinas,et al.  Temperature sensitivity of soil respiration rates enhanced by microbial community response , 2014, Nature.

[40]  M. Lange,et al.  Increased belowground carbon inputs and warming promote loss of soil organic carbon through complementary microbial responses , 2014 .

[41]  Yujie He,et al.  Uncertainty in the fate of soil organic carbon: A comparison of three conceptually different decomposition models at a larch plantation , 2014 .

[42]  G. Heuvelink,et al.  SoilGrids1km — Global Soil Information Based on Automated Mapping , 2014, PloS one.

[43]  A. McGuire,et al.  The implications of microbial and substrate limitation for the fates of carbon in different organic soil horizon types of boreal forest ecosystems: a mechanistically based model analysis , 2014 .

[44]  William R. Wieder,et al.  Integrating microbial physiology and physio-chemical principles in soils with the MIcrobial-MIneral Carbon Stabilization (MIMICS) model , 2014 .

[45]  Lianhong Gu,et al.  Microbial dormancy improves development and experimental validation of ecosystem model , 2014, The ISME Journal.

[46]  Dipankar Dwivedi,et al.  Long residence times of rapidly decomposable soil organic matter: application of a multi-phase, multi-component, and vertically resolved model (BAMS1) to soil carbon dynamics , 2014 .

[47]  Yiqi Luo,et al.  Structural analysis of three global land models on carbon cycle simulations using a traceability framework , 2014 .

[48]  E. Kowalczyk,et al.  Modeling permafrost thaw and ecosystem carbon cycle under annual and seasonal warming at an Arctic tundra site in Alaska , 2014 .

[49]  K. Davis,et al.  Uncertainty in model parameters and regional carbon fluxes: A model-data fusion approach , 2014 .

[50]  Yiqi Luo,et al.  Faster Decomposition Under Increased Atmospheric CO2 Limits Soil Carbon Storage , 2014, Science.

[51]  Michael C. Dietze,et al.  The role of data assimilation in predictive ecology , 2014 .

[52]  Qingkui Wang,et al.  Response of organic carbon mineralization and microbial community to leaf litter and nutrient additions in subtropical forest soils , 2014 .

[53]  W. Wieder,et al.  Digging Into the World Beneath Our Feet: Bridging Across Scales in the Age of Global Change , 2014 .

[54]  Andreas Richter,et al.  Microbial community dynamics alleviate stoichiometric constraints during litter decay , 2014, Ecology letters.

[55]  N. Huth,et al.  Modelling soil carbon and nitrogen dynamics using measurable and conceptual soil organic matter pools in APSIM , 2014 .

[56]  G. Bonan,et al.  Evaluating soil biogeochemistry parameterizations in Earth system models with observations , 2014 .

[57]  P. Bodegom,et al.  Incorporating microbial ecology concepts into global soil mineralization models to improve predictions of carbon and nitrogen fluxes , 2014 .

[58]  Yiqi Luo,et al.  Evaluation and improvement of a global land model against soil carbon data using a Bayesian Markov chain Monte Carlo method , 2014 .

[59]  E. Rastetter,et al.  Responses of a tundra system to warming using SCAMPS: a stoichiometrically coupled, acclimating microbe–plant–soil model , 2014 .

[60]  B. Elberling,et al.  Circumpolar assessment of permafrost C quality and its vulnerability over time using long‐term incubation data , 2014, Global change biology.

[61]  Atul K. Jain,et al.  Evaluation of 11 terrestrial carbon–nitrogen cycle models against observations from two temperate Free-Air CO2 Enrichment studies , 2014, The New phytologist.

[62]  Yiqi Luo,et al.  Soil carbon sensitivity to temperature and carbon use efficiency compared across microbial-ecosystem models of varying complexity , 2014, Biogeochemistry.

[63]  Yiqi Luo,et al.  Sources of variation in simulated ecosystem carbon storage capacity from the 5th Climate Model Intercomparison Project (CMIP5) , 2014 .

[64]  Matthew J. Smith,et al.  Oscillatory behavior of two nonlinear microbial models of soil carbon decomposition , 2013 .

[65]  J. Randerson,et al.  Changes in soil organic carbon storage predicted by Earth system models during the 21st century , 2013 .

[66]  R. Giering,et al.  The BETHY/JSBACH Carbon Cycle Data Assimilation System: experiences and challenges , 2013 .

[67]  Jizhong Zhou,et al.  Differential responses of soil organic carbon fractions to warming: Results from an analysis with data assimilation , 2013 .

[68]  Peijun Shi,et al.  Nonsteady state carbon sequestration in forest ecosystems of China estimated by data assimilation , 2013 .

[69]  M. Bradford Thermal adaptation of decomposer communities in warming soils , 2013, Front. Microbiol..

[70]  M. Torn,et al.  The effect of vertically resolved soil biogeochemistry and alternate soil C and N models on C dynamics of CLM4 , 2013 .

[71]  S. Sistla,et al.  Seasonal patterns of microbial extracellular enzyme activities in an arctic tundra soil: Identifying direct and indirect effects of long-term summer warming , 2013 .

[72]  William R. Wieder,et al.  Global soil carbon projections are improved by modelling microbial processes , 2013 .

[73]  Noah Fierer,et al.  Global drivers and patterns of microbial abundance in soil , 2013 .

[74]  Y. Balkanski,et al.  A new data set of soil mineralogy for dust-cycle modeling , 2013 .

[75]  V. Brovkin,et al.  Effect of Anthropogenic Land-Use and Land-Cover Changes on Climate and Land Carbon Storage in CMIP5 Projections for the Twenty-First Century , 2013 .

[76]  Matthew J. Smith,et al.  Predictability of the terrestrial carbon cycle , 2015, Global change biology.

[77]  Jianyang Xia,et al.  Traceable components of terrestrial carbon storage capacity in biogeochemical models , 2013, Global change biology.

[78]  Pierre Friedlingstein,et al.  Twenty-First-Century Compatible CO2 Emissions and Airborne Fraction Simulated by CMIP5 Earth System Models under Four Representative Concentration Pathways , 2013, Journal of Climate.

[79]  Peter E. Thornton,et al.  A global analysis of soil microbial biomass carbon, nitrogen and phosphorus in terrestrial ecosystems , 2013 .

[80]  Michael C. Dietze,et al.  Facilitating feedbacks between field measurements and ecosystem models , 2013 .

[81]  K. Denef,et al.  The Microbial Efficiency‐Matrix Stabilization (MEMS) framework integrates plant litter decomposition with soil organic matter stabilization: do labile plant inputs form stable soil organic matter? , 2013, Global change biology.

[82]  T. Crowther,et al.  Thermal acclimation in widespread heterotrophic soil microbes. , 2013, Ecology letters.

[83]  R. Knutti,et al.  Robustness and uncertainties in the new CMIP5 climate model projections , 2013 .

[84]  J. Six,et al.  The temperature response of soil microbial efficiency and its feedback to climate , 2013 .

[85]  F. Moyano,et al.  Responses of soil heterotrophic respiration to moisture availability: An exploration of processes and models , 2013 .

[86]  M. Rummukainen,et al.  GCM characteristics explain the majority of uncertainty in projected 21st century terrestrial ecosystem carbon balance , 2013 .

[87]  G. Bonan,et al.  Evaluating litter decomposition in earth system models with long‐term litterbag experiments: an example using the Community Land Model version 4 (CLM4) , 2013, Global change biology.

[88]  Yiqi Luo,et al.  Separating soil CO2 efflux into C-pool-specific decay rates via inverse analysis of soil incubation data , 2013, Oecologia.

[89]  H. Ruan,et al.  Temperature Sensitivity of Soil Organic Carbon Mineralization along an Elevation Gradient in the Wuyi Mountains, China , 2013, PloS one.

[90]  K.,et al.  Carbon–Concentration and Carbon–Climate Feedbacks in CMIP5 Earth System Models , 2012 .

[91]  M. Kästner,et al.  SOM genesis: microbial biomass as a significant source , 2012, Biogeochemistry.

[92]  J. Randerson,et al.  Causes of variation in soil carbon simulations from CMIP5 Earth system models and comparison with observations , 2012 .

[93]  Yiqi Luo,et al.  A semi-analytical solution to accelerate spin-up of a coupled carbon and nitrogen land model to steady state , 2012 .

[94]  Philippe Ciais,et al.  A framework for benchmarking land models , 2012 .

[95]  Benjamin Smith,et al.  Robustness and uncertainty in terrestrial ecosystem carbon response to CMIP5 climate change projections , 2012 .

[96]  Drew W. Purves,et al.  The climate dependence of the terrestrial carbon cycle, including parameter and structural uncertainties , 2012 .

[97]  Joshua P. Schimel,et al.  Microbial control over carbon cycling in soil , 2012, Front. Microbio..

[98]  S D Allison,et al.  A trait-based approach for modelling microbial litter decomposition. , 2012, Ecology letters.

[99]  E. Bernhardt,et al.  Roots and fungi accelerate carbon and nitrogen cycling in forests exposed to elevated CO2. , 2012, Ecology letters.

[100]  Alan Hastings,et al.  Ecosystem carbon storage capacity as affected by disturbance regimes: A general theoretical model , 2012 .

[101]  Susan E. Trumbore,et al.  Models of soil organic matter decomposition: the SoilR package, version 1.0 , 2012 .

[102]  J. Canadell,et al.  The Northern Circumpolar Soil Carbon Database: spatially distributed datasets of soil coverage and soil carbon storage in the northern permafrost regions , 2012 .

[103]  S. Hobbie,et al.  Response of decomposing litter and its microbial community to multiple forms of nitrogen enrichment , 2012 .

[104]  Jizhong Zhou,et al.  Carbon quality and the temperature sensitivity of soil organic carbon decomposition in a tallgrass prairie , 2012 .

[105]  Eoin L. Brodie,et al.  Integrating microbial ecology into ecosystem models: challenges and priorities , 2012, Biogeochemistry.

[106]  M. Bradford,et al.  The Biogeography of Microbial Communities and Ecosystem Processes: Implications for Soil and Ecosystem Models , 2012 .

[107]  M. Kramer,et al.  Stoichiometry constrains microbial response to root exudation- insights from a model and a field experiment in a temperate forest , 2012 .

[108]  A. Whitmore,et al.  Soil organic matter turnover is governed by accessibility not recalcitrance , 2012 .

[109]  N. Fierer,et al.  Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes , 2012 .

[110]  Chengquan Huang,et al.  Observations and assessment of forest carbon dynamics following disturbance in North America , 2012 .

[111]  K. Oleson,et al.  Reconciling leaf physiological traits and canopy flux data: Use of the TRY and FLUXNET databases in the Community Land Model version 4 , 2012 .

[112]  Steven D. Allison,et al.  The Michaelis–Menten kinetics of soil extracellular enzymes in response to temperature: a cross‐latitudinal study , 2012 .

[113]  E. Davidson,et al.  Predicting decadal trends and transient responses of radiocarbon storage and fluxes in a temperate forest soil , 2012 .

[114]  C. Sierra Temperature sensitivity of organic matter decomposition in the Arrhenius equation: some theoretical considerations , 2012, Biogeochemistry.

[115]  M. Weiss,et al.  Temperature sensitivity of soil enzyme kinetics under N‐fertilization in two temperate forests , 2012 .

[116]  E. Davidson,et al.  The Dual Arrhenius and Michaelis–Menten kinetics model for decomposition of soil organic matter at hourly to seasonal time scales , 2012 .

[117]  Daniel M. Kashian,et al.  Effects of biotic disturbances on forest carbon cycling in the United States and Canada , 2012 .

[118]  Yiqi Luo,et al.  Uncertainties in carbon residence time and NPP-driven carbon uptake in terrestrial ecosystems of the conterminous USA: a Bayesian approach , 2012 .

[119]  M. Reichstein,et al.  The moisture response of soil heterotrophic respiration: interaction with soil properties , 2011 .

[120]  Rob Knight,et al.  Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients , 2011, The ISME Journal.

[121]  Guido Grosse,et al.  Vulnerability of high‐latitude soil organic carbon in North America to disturbance , 2011 .

[122]  D. Lawrence,et al.  Simulating coupled carbon and nitrogen dynamics following mountain pine beetle outbreaks in the western United States , 2011 .

[123]  Donald R. Zak,et al.  Ecological Lessons from Free-Air CO2 Enrichment (FACE) Experiments , 2011 .

[124]  Mark E. Harmon,et al.  Decomposition of heterogeneous organic matter and its long-term stabilization in soils , 2011 .

[125]  M. Sommer,et al.  Application of δ 13 C and δ 15 N isotopic signatures of organic matter fractions sequentially separated from adjacent arable and forest soils to identify carbon stabilization mechanisms , 2011 .

[126]  D. Manning,et al.  Persistence of soil organic matter as an ecosystem property , 2011, Nature.

[127]  J. Melillo,et al.  Soil warming alters nitrogen cycling in a New England forest: implications for ecosystem function and structure , 2011, Oecologia.

[128]  J. Melillo,et al.  Soil warming alters nitrogen cycling in a New England forest: implications for ecosystem function and structure , 2011, Oecologia.

[129]  Scott C. Thomas,et al.  Effect of temperature on metabolic activity of intact microbial communities: Evidence for altered metabolic pathway activity but not for increased maintenance respiration and reduced carbon use efficiency , 2011 .

[130]  Yiqi Luo,et al.  Uncertainty analysis of forest carbon sink forecast with varying measurement errors: a data assimilation approach , 2011 .

[131]  C. Jones,et al.  Direct soil moisture controls of future global soil carbon changes: An important source of uncertainty , 2011 .

[132]  P. Friedlingstein,et al.  Modeling fire and the terrestrial carbon balance , 2011 .

[133]  E. Stehfest,et al.  Harmonization of land-use scenarios for the period 1500–2100: 600 years of global gridded annual land-use transitions, wood harvest, and resulting secondary lands , 2011 .

[134]  Craig C. Brandt,et al.  Regional uptake and release of crop carbon in the United States , 2011 .

[135]  Shenfeng Fei,et al.  Ecological forecasting and data assimilation in a data-rich era. , 2011, Ecological applications : a publication of the Ecological Society of America.

[136]  Yiqi Luo,et al.  Relative information contributions of model vs. data to short- and long-term forecasts of forest carbon dynamics. , 2011, Ecological applications : a publication of the Ecological Society of America.

[137]  I. Kögel‐Knabner,et al.  Concurrent evolution of organic and mineral components during initial soil development after retreat of the Damma glacier, Switzerland , 2011 .

[138]  M. Bradford,et al.  The effect of resource history on the functioning of soil microbial communities is maintained across time , 2011 .

[139]  Karsten Pruess,et al.  TOUGHREACT Version 2.0: A simulator for subsurface reactive transport under non-isothermal multiphase flow conditions , 2011, Comput. Geosci..

[140]  Markus Reichstein,et al.  Improving canopy processes in the Community Land Model version 4 (CLM4) using global flux fields empirically inferred from FLUXNET data , 2011 .

[141]  J. Melillo,et al.  Soil warming, carbon–nitrogen interactions, and forest carbon budgets , 2011, Proceedings of the National Academy of Sciences.

[142]  R. B. Jackson,et al.  Increases in the flux of carbon belowground stimulate nitrogen uptake and sustain the long-term enhancement of forest productivity under elevated CO₂. , 2011, Ecology letters.

[143]  E. Bernhardt,et al.  Enhanced root exudation induces microbial feedbacks to N cycling in a pine forest under long-term CO2 fumigation. , 2011, Ecology letters.

[144]  Yiqi Luo,et al.  Dynamic disequilibrium of the terrestrial carbon cycle under global change. , 2011, Trends in ecology & evolution.

[145]  P. Sollins,et al.  Old and stable soil organic matter is not necessarily chemically recalcitrant: implications for modeling concepts and temperature sensitivity , 2011 .

[146]  Nuno Carvalhais,et al.  Identification of vegetation and soil carbon pools out of equilibrium in a process model via eddy covariance and biometric constraints , 2010 .

[147]  Y. Kuzyakov Priming effects : interactions between living and dead organic matter , 2010 .

[148]  David S. Lee,et al.  Historical (1850–2000) gridded anthropogenic and biomass burning emissions of reactive gases and aerosols: methodology and application , 2010 .

[149]  J. Lennon,et al.  Evidence for a temperature acclimation mechanism in bacteria: an empirical test of a membrane‐mediated trade‐off , 2010 .

[150]  Sandy P. Harrison,et al.  Corrigendum to "The influence of vegetation, fire spread and fire behaviour on biomass burning and trace gas emissions: results from a process-based model" published in Biogeosciences, 7, 1991-2011, doi:10.5194/bg-7-1991-2010, 2010 , 2010 .

[151]  Lingli Liu,et al.  A global perspective on belowground carbon dynamics under nitrogen enrichment. , 2010, Ecology letters.

[152]  S. Trumbore,et al.  Recent (< 4 year old) leaf litter is not a major source of microbial carbon in a temperate forest mineral soil , 2010 .

[153]  Sandy P. Harrison,et al.  The influence of vegetation, fire spread and fire behaviour on biomass burning and trace gas emissions: results from a process-based model , 2010 .

[154]  A. Thomson,et al.  A global database of soil respiration data , 2010 .

[155]  F. M. Hoffman,et al.  Fire dynamics during the 20th century simulated by the Community Land Model , 2010 .

[156]  Mark A. Bradford,et al.  Soil-carbon response to warming dependent on microbial physiology , 2010 .

[157]  Markus Reichstein,et al.  Reduction of forest soil respiration in response to nitrogen deposition , 2010 .

[158]  M. Bradford,et al.  Thermal adaptation of heterotrophic soil respiration in laboratory microcosms , 2010 .

[159]  Atul K. Jain,et al.  Integration of nitrogen cycle dynamics into the Integrated Science Assessment Model for the study of terrestrial ecosystem responses to global change , 2009 .

[160]  Ian G. Enting,et al.  A review of applications of model–data fusion to studies of terrestrial carbon fluxes at different scales , 2009 .

[161]  Peter Franks,et al.  Planktonic ecosystem models: perplexing parameterizations and a failure to fail , 2009 .

[162]  Brian K. Lamb,et al.  A multiscale database of soil properties for regional environmental quality modeling in the western United States , 2009, Journal of Soil and Water Conservation.

[163]  J. Gregory,et al.  Quantifying Carbon Cycle Feedbacks , 2009 .

[164]  J. Neff,et al.  Does adding microbial mechanisms of decomposition improve soil organic matter models? A comparison of four models using data from a pulsed rewetting experiment , 2009 .

[165]  Qianlai Zhuang,et al.  A global sensitivity analysis and Bayesian inference framework for improving the parameter estimation and prediction of a process-based Terrestrial Ecosystem Model , 2009 .

[166]  J. Six,et al.  Assessing the effect of elevated carbon dioxide on soil carbon: a comparison of four meta‐analyses , 2009 .

[167]  A. Porporato,et al.  Soil carbon and nitrogen mineralization: Theory and models across scales , 2009 .

[168]  J. Canadell,et al.  Soil organic carbon pools in the northern circumpolar permafrost region , 2009 .

[169]  M. Bradford,et al.  The influence of microbial communities, management, and soil texture on soil organic matter chemistry , 2009 .

[170]  Mark E. Harmon,et al.  Long‐term patterns of mass loss during the decomposition of leaf and fine root litter: an intersite comparison , 2009 .

[171]  S. Trumbore Radiocarbon and Soil Carbon Dynamics , 2009 .

[172]  Li Zhang,et al.  Parameter identifiability, constraint, and equifinality in data assimilation with ecosystem models. , 2009, Ecological applications : a publication of the Ecological Society of America.

[173]  Timothy D. Scheibe,et al.  Coupling a genome‐scale metabolic model with a reactive transport model to describe in situ uranium bioremediation , 2009, Microbial biotechnology.

[174]  Yiqi Luo,et al.  inor stimulation of soil carbon storage by nitrogen addition : A meta-analysis , 2011 .

[175]  S. Frey,et al.  Thermal adaptation of soil microbial respiration to elevated temperature. , 2008, Ecology letters.

[176]  S. Frey,et al.  Microbial biomass, functional capacity, and community structure after 12 years of soil warming , 2008 .

[177]  J. Dushoff,et al.  SCALING FROM TREES TO FORESTS: TRACTABLE MACROSCOPIC EQUATIONS FOR FOREST DYNAMICS , 2008 .

[178]  S. Allison,et al.  Stoichiometry of soil enzyme activity at global scale. , 2008, Ecology letters.

[179]  W. Silver,et al.  Simple three‐pool model accurately describes patterns of long‐term litter decomposition in diverse climates , 2008 .

[180]  J. Canadell,et al.  Peatlands and the carbon cycle: from local processes to global implications - a synthesis , 2008 .

[181]  J. Neff,et al.  Molecular C dynamics downstream: the biochemical decomposition sequence and its impact on soil organic matter structure and function. , 2008, The Science of the total environment.

[182]  K. Treseder Nitrogen additions and microbial biomass: a meta-analysis of ecosystem studies. , 2008, Ecology letters.

[183]  S. Hobbie Nitrogen effects on decomposition: a five-year experiment in eight temperate sites. , 2008, Ecology.

[184]  Yiqi Luo,et al.  Spatial patterns of ecosystem carbon residence time and NPP‐driven carbon uptake in the conterminous United States , 2008 .

[185]  J. Xia,et al.  Global response patterns of terrestrial plant species to nitrogen addition. , 2008, The New phytologist.

[186]  C. Field,et al.  A unifying framework for dinitrogen fixation in the terrestrial biosphere , 2008, Nature.

[187]  Benjamin Smith,et al.  Representation of vegetation dynamics in the modelling of terrestrial ecosystems: comparing two contrasting approaches within European climate space , 2008 .

[188]  J. A. Trofymow,et al.  Litter decomposition and nitrogen and phosphorus dynamics in peatlands and uplands over 12 years in central Canada , 2008, Oecologia.

[189]  Yiqi Luo,et al.  Rates of litter decomposition in terrestrial ecosystems: global patterns and controlling factors , 2008 .

[190]  Nuno Carvalhais,et al.  Implications of the carbon cycle steady state assumption for biogeochemical modeling performance and inverse parameter retrieval , 2008 .

[191]  M. Reichstein,et al.  Colimitation of decomposition by substrate and decomposers - a comparison of model formulations , 2008 .

[192]  J. Six,et al.  Soil Carbon Saturation Controls Labile and Stable Carbon Pool Dynamics , 2008 .

[193]  D. Relman,et al.  Linking Microbial Phylogeny to Metabolic Activity at the Single-Cell Level by Using Enhanced Element Labeling-Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (EL-FISH) and NanoSIMS , 2008, Applied and Environmental Microbiology.

[194]  K. Paustian,et al.  Soil carbon saturation: Linking concept and measurable carbon pools , 2008 .

[195]  K. Treseder,et al.  Nitrogen limitation of net primary productivity in terrestrial ecosystems is globally distributed. , 2008, Ecology.

[196]  M. Plötze,et al.  Clay minerals, oxyhydroxide formation, element leaching and humus development in volcanic soils , 2008 .

[197]  Helmut Hillebrand,et al.  Global analysis of nitrogen and phosphorus limitation of primary producers in freshwater, marine and terrestrial ecosystems. , 2007, Ecology letters.

[198]  P. Sollins,et al.  A conceptual model of organo-mineral interactions in soils: self-assembly of organic molecular fragments into zonal structures on mineral surfaces , 2007 .

[199]  R. B. Jackson,et al.  Toward an ecological classification of soil bacteria. , 2007, Ecology.

[200]  C. Field,et al.  A model of biogeochemical cycles of carbon, nitrogen, and phosphorus including symbiotic nitrogen fixation and phosphatase production , 2007 .

[201]  Mark E. Harmon,et al.  Global-Scale Similarities in Nitrogen Release Patterns During Long-Term Decomposition , 2007, Science.

[202]  P. Reich,et al.  Carbon-Nitrogen Interactions in Terrestrial Ecosystems in Response to Rising Atmospheric Carbon Dioxide , 2006 .

[203]  Keith W. Oleson,et al.  Simulation of Global Land Surface Conditions from 1948 to 2004. Part I: Forcing Data and Evaluations , 2006 .

[204]  W. Knorr,et al.  A climate-change risk analysis for world ecosystems , 2006, Proceedings of the National Academy of Sciences.

[205]  R. Schnur,et al.  Climate-carbon cycle feedback analysis: Results from the C , 2006 .

[206]  Takeshi Ise,et al.  The global-scale temperature and moisture dependencies of soil organic carbon decomposition: an analysis using a mechanistic decomposition model , 2006 .

[207]  L. White,et al.  Probabilistic inversion of a terrestrial ecosystem model: Analysis of uncertainty in parameter estimation and model prediction , 2006 .

[208]  D. Moorhead,et al.  A THEORETICAL MODEL OF LITTER DECAY AND MICROBIAL INTERACTION , 2006 .

[209]  E. Davidson,et al.  Temperature sensitivity of soil carbon decomposition and feedbacks to climate change , 2006, Nature.

[210]  D. Schimel,et al.  Geomorphic control of landscape carbon accumulation , 2006 .

[211]  Wolfgang Lucht,et al.  Terrestrial biosphere carbon storage under alternative climate projections , 2006 .

[212]  Chris D. Jones,et al.  Climate-carbon cycle feedbacks under stabilization: uncertainty and observational constraints , 2006 .

[213]  Peter S. Curtis,et al.  NITROGEN ADDITIONS AND LITTER DECOMPOSITION: A META-ANALYSIS , 2005 .

[214]  Amy E. Miller,et al.  Episodic rewetting enhances carbon and nitrogen release from chaparral soils , 2005 .

[215]  R. Giering,et al.  Two decades of terrestrial carbon fluxes from a carbon cycle data assimilation system (CCDAS) , 2005 .

[216]  P. Cox,et al.  Global climate change and soil carbon stocks; predictions from two contrasting models for the turnover of organic carbon in soil , 2005 .

[217]  C. Lauber,et al.  NITROGEN DEPOSITION MODIFIES SOIL CARBON STORAGE THROUGH CHANGES IN MICROBIAL ENZYMATIC ACTIVITY , 2004 .

[218]  S. Frey,et al.  Chronic nitrogen enrichment affects the structure and function of the soil microbial community in temperate hardwood and pine forests , 2004 .

[219]  N. E. Miller,et al.  Fine-root production dominates response of a deciduous forest to atmospheric CO2 enrichment. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[220]  C. Lauber,et al.  Microbial Community Structure and Oxidative Enzyme Activity in Nitrogen-amended North Temperate Forest Soils , 2004, Microbial Ecology.

[221]  Luc Abbadie,et al.  Carbon input to soil may decrease soil carbon content , 2004 .

[222]  Michael R. Raupach,et al.  Representation of land-surface processes in aeolian transport models , 2004, Environ. Model. Softw..

[223]  Joshua P. Schimel,et al.  The implications of exoenzyme activity on microbial carbon and nitrogen limitation in soil: a theoretical model , 2003 .

[224]  Philippe Ciais,et al.  How uncertainties in future climate change predictions translate into future terrestrial carbon fluxes , 2003 .

[225]  A. Austin,et al.  Global patterns of the isotopic composition of soil and plant nitrogen , 2003 .

[226]  Josep G. Canadell,et al.  Sustainability of terrestrial carbon sequestration: A case study in Duke Forest with inversion approach , 2003 .

[227]  P. Cox,et al.  Uncertainty in climate’carbon-cycle projections associated with the sensitivity of soil respiration to temperature , 2003 .

[228]  J. Aber,et al.  Soil warming and carbon-cycle feedbacks to the climate system. , 2002, Science.

[229]  W. Bowman,et al.  Variable effects of nitrogen additions on the stability and turnover of soil carbon , 2002, Nature.

[230]  M. Fischer,et al.  Organic carbon and carbon isotopes in modern and 100‐year‐old‐soil archives of the Russian steppe , 2002 .

[231]  R. Monaghan,et al.  When is a measured soil organic matter fraction equivalent to a model pool? , 2002 .

[232]  Yiqi Luo,et al.  Response of soil CO2 efflux to water manipulation in a tallgrass prairie ecosystem , 2002, Plant and Soil.

[233]  Yiqi Luo,et al.  Acclimatization of soil respiration to warming in a tall grass prairie , 2001, Nature.

[234]  Sandy P. Harrison,et al.  Global Biogeochemical Cycles in the Climate System , 2001 .

[235]  Peter A. Coppin,et al.  Parameter estimation in surface exchange models using nonlinear inversion: how many parameters can we estimate and which measurements are most useful? , 2001 .

[236]  F. Woodward,et al.  Global response of terrestrial ecosystem structure and function to CO2 and climate change: results from six dynamic global vegetation models , 2001 .

[237]  Susan E. Trumbore,et al.  Controls over carbon storage and turnover in high‐latitude soils , 2000, Global change biology.

[238]  R. B. Jackson,et al.  BELOWGROUND CONSEQUENCES OF VEGETATION CHANGE AND THEIR TREATMENT IN MODELS , 2000 .

[239]  R. B. Jackson,et al.  THE VERTICAL DISTRIBUTION OF SOIL ORGANIC CARBON AND ITS RELATION TO CLIMATE AND VEGETATION , 2000 .

[240]  D. Moorhead,et al.  Simulated patterns of litter decay predict patterns of extracellular enzyme activities , 2000 .

[241]  P. De Angelis,et al.  Effects of elevated (CO2) on photosynthesis in European forest species: a meta-analysis of model parameters , 1999 .

[242]  Stephen W. Pacala,et al.  LINEAR ANALYSIS OF SOIL DECOMPOSITION: INSIGHTS FROM THE CENTURY MODEL , 1998 .

[243]  Xiangming Xiao,et al.  Equilibrium responses of global net primary production and carbon storage to doubled atmospheric carbon dioxide: Sensitivity to changes in vegetation nitrogen concentration , 1997 .

[244]  Christopher B. Field,et al.  Substrate limitations for heterotrophs: Implications for models that estimate the seasonal cycle of atmospheric CO2 , 1996 .

[245]  David S. Schimel,et al.  Climate and nitrogen controls on the geography and timescales of terrestrial biogeochemical cycling , 1996 .

[246]  I. Prentice,et al.  A general model for the light-use efficiency of primary production , 1996 .

[247]  G. Ågren,et al.  Quality : a bridge between theory and experiment in soil organic matter studies , 1996 .

[248]  H. Reynolds,et al.  The ecological significance of plasticity in root weight ratio in response to nitrogen: Opinion , 1996, Plant and Soil.

[249]  M. Firestone,et al.  Mechanisms for soil moisture effects on activity of nitrifying bacteria , 1995, Applied and environmental microbiology.

[250]  J. Lloyd,et al.  On the temperature dependence of soil respiration , 1994 .

[251]  Robert J. Scholes,et al.  Observations and modeling of biomass and soil organic matter dynamics for the grassland biome worldwide , 1993 .

[252]  A. McGuire,et al.  Global climate change and terrestrial net primary production , 1993, Nature.

[253]  Keith Paustian,et al.  Modeling soil organic matter in organic-amended and nitrogen-fertilized long-term plots , 1992 .

[254]  J. Lynch,et al.  The turnover of organic carbon and nitrogen in soil. , 1990 .

[255]  David S. Schimel,et al.  Texture, climate, and cultivation effects on soil organic matter content in U.S. grassland soils , 1989 .

[256]  K. Fog,et al.  THE EFFECT OF ADDED NITROGEN ON THE RATE OF DECOMPOSITION OF ORGANIC MATTER , 1988 .

[257]  W. Parton,et al.  Dynamics of C, N, P and S in grassland soils: a model , 1988 .

[258]  W. Parton,et al.  Analysis of factors controlling soil organic matter levels in Great Plains grasslands , 1987 .

[259]  J. Berry,et al.  A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species , 1980, Planta.

[260]  D. S. Jenkinson,et al.  THE TURNOVER OF SOIL ORGANIC MATTER IN SOME OF THE ROTHAMSTED CLASSICAL EXPERIMENTS , 1977 .

[261]  H. Parnas Model for decomposition of organic material by microorganisms , 1975 .

[262]  J. Olson,et al.  Energy Storage and the Balance of Producers and Decomposers in Ecological Systems , 1963 .

[263]  J. Monod The Growth of Bacterial Cultures , 1949 .

[264]  S. Waksman,et al.  COMPOSITION OF NATURAL ORGANIC MATERIALS AND THEIR DECOMPOSITION IN THE SOIL: IV. THE NATURE AND RAPIDITY OF DECOMPOSITION OF THE VARIOUS ORGANIC COMPLEXES IN DIFFERENT PLANT MATERIALS, UNDER AEROBIC CONDITIONS , 1929 .

[265]  S. Waksman,et al.  The composition of natural organic materials and their decomposition in the soil: I. Methods of quantitative analysis of plant materials , 1927 .

[266]  William J. Riley,et al.  Weaker soil carbon–climate feedbacks resulting from microbial and abiotic interactions , 2015 .

[267]  Jizhong Zhou,et al.  Methods for estimating temperature sensitivity of soil organic matter based on incubation data: A comparative evaluation , 2015 .

[268]  K. Nadelhoffer,et al.  Litter and Root Manipulations Provide Insights into Soil Organic Matter Dynamics and Stability , 2014 .

[269]  Philippe Lagacherie,et al.  GlobalSoilMap: Toward a Fine-Resolution Global Grid of Soil Properties , 2014 .

[270]  W. Post,et al.  Development of microbial-enzyme-mediated decomposition model parameters through steady-state and dynamic analyses. , 2013, Ecological applications : a publication of the Ecological Society of America.

[271]  J. Randerson,et al.  Changes in soil organic carbon storage predicted by Earth system models during the 21 st century , 2013 .

[272]  W. T. Baisden,et al.  Using 50 years of soil radiocarbon data to identify optimal approaches for estimating soil carbon residence times , 2013 .

[273]  Eric A Davidson,et al.  Rate my data: quantifying the value of ecological data for the development of models of the terrestrial carbon cycle. , 2013, Ecological applications : a publication of the Ecological Society of America.

[274]  Freddy Nachtergaele,et al.  State of the Art Report on Global and Regional Soil Information: Where are we? Where to go? , 2013 .

[275]  A. Konopka,et al.  Modeling Microbial Dynamics in Heterogeneous Environments: Growth on Soil Carbon Sources , 2011, Microbial Ecology.

[276]  J. A. V. VEENr,et al.  ORGANIC CARBON DYNAMICS IN GRASSLAND SOILS. 1. BACKGROUND INFORMATION AND COMPUTER SIMULATION , 2009 .

[277]  C. Jones,et al.  Sources of uncertainty in global modelling of future soil organic carbon storage , 2009 .

[278]  Elevated atmospheric CO 2 increases microbial growth rates in soil : results of three CO 2 enrichment experiments , 2009 .

[279]  R. O L A D A I R * W, W I L L I A,et al.  Simple three-pool model accurately describes patterns of long-term litter decomposition in diverse climates , 2008 .

[280]  R. Sinsabaugh,et al.  Enzymic analysis of microbial pattern and process , 2004, Biology and Fertility of Soils.

[281]  Yu. Pogoreltsev,et al.  The Application , 2020, How to Succeed in the Academic Clinical Interview.

[282]  R. L. Sinsabaugha,et al.  The effects of long term nitrogen deposition on extracellular enzyme activity in an Acer saccharum forest soil , 2002 .

[283]  H. Mooney,et al.  23 – Estimations of Global Terrestrial Productivity: Converging toward a Single Number? , 2001 .

[284]  J. Schimel Biogeochemical Models: Implicit versus Explicit Microbiology , 2001 .

[285]  Eric A. Davidson,et al.  Soil carbon cycling in a temperate forest: radiocarbon-based estimates of residence times, sequestration rates and partitioning of fluxes , 2000 .

[286]  P. Vitousek,et al.  Mineral control of soil organic carbon storage and turnover , 1997, Nature.

[287]  D. Jenkinson,et al.  Modelling the turnover of organic matter in long-term experiments at Rothamsted , 1987 .

[288]  R. Burns Enzyme activity in soil: Location and a possible role in microbial ecology , 1982 .

[289]  G. Pugh Soil Microbiology , 1964, Nature.

[290]  H. Jenny,et al.  E.W. Hilgard And The Birth Of Modern Soil Science , 1961 .

[291]  M. P.R.,et al.  A METHOD FOR SCALING VEGETATION DYNAMICS: THE ECOSYSTEM DEMOGRAPHY MODEL (ED) , 2022 .