Training of polyp staging systems using mixed imaging modalities

BACKGROUND In medical image data sets, the number of images is usually quite small. The small number of training samples does not allow to properly train classifiers which leads to massive overfitting to the training data. In this work, we investigate whether increasing the number of training samples by merging datasets from different imaging modalities can be effectively applied to improve predictive performance. Further, we investigate if the extracted features from the employed image representations differ between different imaging modalities and if domain adaption helps to overcome these differences. METHOD We employ twelve feature extraction methods to differentiate between non-neoplastic and neoplastic lesions. Experiments are performed using four different classifier training strategies, each with a different combination of training data. The specifically designed setup for these experiments enables a fair comparison between the four training strategies. RESULTS Combining high definition with high magnification training data and chromoscopic with non-chromoscopic training data partly improved the results. The usage of domain adaptation has only a small effect on the results compared to just using non-adapted training data. CONCLUSION Merging datasets from different imaging modalities turned out to be partially beneficial for the case of combining high definition endoscopic data with high magnification endoscopic data and for combining chromoscopic with non-chromoscopic data. NBI and chromoendoscopy on the other hand are mostly too different with respect to the extracted features to combine images of these two modalities for classifier training.

[1]  Michael Gadermayr,et al.  Evaluation of i-Scan Virtual Chromoendoscopy and Traditional Chromoendoscopy for the Automated Diagnosis of Colonic Polyps , 2016, CARE@MICCAI.

[2]  Andreas Uhl,et al.  Computer-assisted pit-pattern classification in different wavelet domains for supporting dignity assessment of colonic polyps , 2009, Pattern Recognit..

[3]  Andreas Uhl,et al.  Delaunay triangulation-based pit density estimation for the classification of polyps in high-magnification chromo-colonoscopy , 2012, Comput. Methods Programs Biomed..

[4]  Andreas Uhl,et al.  Bridging the Resolution Gap between Endoscope Types for a Colonic Polyp Classification , 2014, 2014 22nd International Conference on Pattern Recognition.

[5]  Andreas Uhl,et al.  Directional wavelet based features for colonic polyp classification , 2016, Medical Image Anal..

[6]  S. Kudo,et al.  Colorectal tumours and pit pattern. , 1994, Journal of clinical pathology.

[7]  Andreas Uhl,et al.  Shape and size adapted local fractal dimension for the classification of polyps in HD colonoscopy , 2014, 2014 IEEE International Conference on Image Processing (ICIP).

[8]  Andreas Uhl,et al.  Colonic Polyp Classification in High-Definition Video Using Complex Wavelet-Packets , 2015, Bildverarbeitung für die Medizin.

[9]  Shinji Tanaka,et al.  Local fractal dimension based approaches for colonic polyp classification , 2015, Medical Image Anal..

[10]  A. Uhl,et al.  Computer-Aided Decision Support Systems for Endoscopy in the Gastrointestinal Tract: A Review , 2011, IEEE Reviews in Biomedical Engineering.

[11]  Andreas Uhl,et al.  Color treatment in endoscopic image classification using multi-scale local color vector patterns , 2012, Medical Image Anal..

[12]  Til Aach,et al.  Automated classification of colon polyps in endoscopic image data , 2012, Medical Imaging.

[13]  Andrew Zisserman,et al.  Return of the Devil in the Details: Delving Deep into Convolutional Nets , 2014, BMVC.

[14]  Masahiro Yamaguchi,et al.  Endoscopic Observation of Tissue by Narrowband Illumination , 2003 .

[15]  Chih-Jen Lin,et al.  LIBLINEAR: A Library for Large Linear Classification , 2008, J. Mach. Learn. Res..

[16]  Bernhard Schölkopf,et al.  A Kernel Two-Sample Test , 2012, J. Mach. Learn. Res..

[17]  Yasushi Sano,et al.  Magnifying colonoscopy as a non-biopsy technique for differential diagnosis of non-neoplastic and neoplastic lesions. , 2006, World journal of gastroenterology.

[18]  Shengcai Liao,et al.  Learning Multi-scale Block Local Binary Patterns for Face Recognition , 2007, ICB.

[19]  Mitsuhiro Fujishiro,et al.  Novel image-enhanced endoscopy with i-scan technology. , 2010, World journal of gastroenterology.

[20]  Andreas Uhl,et al.  Exploring Deep Learning and Transfer Learning for Colonic Polyp Classification , 2016, Comput. Math. Methods Medicine.

[21]  Kazufumi Kaneda,et al.  Computer-Aided Colorectal Tumor Classification in NBI Endoscopy Using CNN Features , 2016, ArXiv.

[22]  Andreas Uhl,et al.  A Novel Shape Feature Descriptor for the Classification of Polyps in HD Colonoscopy , 2013, MCV.

[23]  David Zhang,et al.  Domain Adaptation via Maximum Independence of Domain Features , 2016, ArXiv.