Local configuration pattern features for age-related macular degeneration characterization and classification

Age-related Macular Degeneration (AMD) is an irreversible and chronic medical condition characterized by drusen, Choroidal Neovascularization (CNV) and Geographic Atrophy (GA). AMD is one of the major causes of visual loss among elderly people. It is caused by the degeneration of cells in the macula which is responsible for central vision. AMD can be dry or wet type, however dry AMD is most common. It is classified into early, intermediate and late AMD. The early detection and treatment may help one to stop the progression of the disease. Automated AMD diagnosis may reduce the screening time of the clinicians. In this work, we have introduced LCP to characterize normal and AMD classes using fundus images. Linear Configuration Coefficients (CC) and Pattern Occurrence (PO) features are extracted from fundus images. These extracted features are ranked using p-value of the t-test and fed to various supervised classifiers viz. Decision Tree (DT), Nearest Neighbour (k-NN), Naive Bayes (NB), Probabilistic Neural Network (PNN) and Support Vector Machine (SVM) to classify normal and AMD classes. The performance of the system is evaluated using both private (Kasturba Medical Hospital, Manipal, India) and public domain datasets viz. Automated Retinal Image Analysis (ARIA) and STructured Analysis of the Retina (STARE) using ten-fold cross validation. The proposed approach yielded best performance with a highest average accuracy of 97.78%, sensitivity of 98.00% and specificity of 97.50% for STARE dataset using 22 significant features. Hence, this system can be used as an aiding tool to the clinicians during mass eye screening programs to diagnose AMD.

[1]  David A. Landgrebe,et al.  A survey of decision tree classifier methodology , 1991, IEEE Trans. Syst. Man Cybern..

[2]  AcharyaU. Rajendra,et al.  Computer-aided diagnosis of diabetic retinopathy , 2013 .

[3]  U. Rajendra Acharya,et al.  Computer-aided diagnosis of diabetic retinopathy: A review , 2013, Comput. Biol. Medicine.

[4]  Oliver Faust,et al.  AUTOMATED GLAUCOMA DETECTION USING HYBRID FEATURE EXTRACTION IN RETINAL FUNDUS IMAGES , 2013 .

[5]  Jin Tae Kwak,et al.  Efficient data mining for local binary pattern in texture image analysis , 2015, Expert Syst. Appl..

[6]  U. Rajendra Acharya,et al.  Ensemble selection for feature-based classification of diabetic maculopathy images , 2013, Comput. Biol. Medicine.

[7]  Karel J. Zuiderveld,et al.  Contrast Limited Adaptive Histogram Equalization , 1994, Graphics Gems.

[8]  Frank Eperjesi,et al.  Use of fundus imaging in quantification of age-related macular change. , 2007, Survey of ophthalmology.

[9]  Philippe Burlina,et al.  Automated detection of drusen in the macula , 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[10]  G. Coscas,et al.  A new approach of geodesic reconstruction for drusen segmentation in eye fundus images , 2001, IEEE Transactions on Medical Imaging.

[11]  Matti Pietikäinen,et al.  Texture Classification using a Linear Configuration Model based Descriptor , 2011, BMVC.

[12]  Uğur Şevik,et al.  Automatic segmentation of age-related macular degeneration in retinal fundus images , 2008, Comput. Biol. Medicine.

[13]  U. Rajendra Acharya,et al.  Evolutionary algorithm based classifier parameter tuning for automatic diabetic retinopathy grading: A hybrid feature extraction approach , 2013, Knowl. Based Syst..

[14]  Alex C. Michalos,et al.  Fundamentals of Statistics. Vol. I. , 1969 .

[15]  Bálint Antal,et al.  An Ensemble-Based System for Microaneurysm Detection and Diabetic Retinopathy Grading , 2012, IEEE Transactions on Biomedical Engineering.

[16]  Kevin Noronha,et al.  Automated diagnosis of Age-related Macular Degeneration using greyscale features from digital fundus images , 2014, Comput. Biol. Medicine.

[17]  Frans Coenen,et al.  Retinal image classification using a histogram based approach , 2010, The 2010 International Joint Conference on Neural Networks (IJCNN).

[18]  Ayyakkannu Manivannan,et al.  Automated drusen detection in retinal images using analytical modelling algorithms , 2011, Biomedical engineering online.

[19]  Adam W. Hoover,et al.  Drusen Detection in a Retinal Image Using Multi-level Analysis , 2003, MICCAI.

[20]  László G. Nyúl,et al.  Glaucoma risk index:  Automated glaucoma detection from color fundus images , 2010, Medical Image Anal..

[21]  Li Guo,et al.  Imaging in DRY AMD , 2013 .

[22]  Baihua Li,et al.  Automatic extraction of retinal features from colour retinal images for glaucoma diagnosis: A review , 2013, Comput. Medical Imaging Graph..

[23]  Ching Y. Suen,et al.  Application of majority voting to pattern recognition: an analysis of its behavior and performance , 1997, IEEE Trans. Syst. Man Cybern. Part A.

[24]  Frans Coenen,et al.  Automated "disease/no disease" grading of age-related macular degeneration by an image mining approach. , 2012, Investigative ophthalmology & visual science.

[25]  John D. Austin,et al.  Adaptive histogram equalization and its variations , 1987 .

[26]  José Francisco Martínez Trinidad,et al.  Mining patterns for clustering on numerical datasets using unsupervised decision trees , 2015, Knowl. Based Syst..

[27]  P. Soliz,et al.  Independent Component Analysis for Vision-inspired Classification of Retinal Images with Age-related Macular Degeneration , 2008, 2008 IEEE Southwest Symposium on Image Analysis and Interpretation.

[28]  Victor Murray,et al.  Automatic detection of diabetic retinopathy and age-related macular degeneration in digital fundus images. , 2011, Investigative ophthalmology & visual science.

[29]  A. Bhuiyan,et al.  A Review of Disease Grading and Remote Diagnosis for Sight Threatening Eye Condition: Age Related Macular Degeneration , 2014 .

[30]  LamL.,et al.  Application of majority voting to pattern recognition , 1997 .

[31]  Donald F. Specht,et al.  Probabilistic neural networks , 1990, Neural Networks.

[32]  R. Klein,et al.  Global prevalence of age-related macular degeneration and disease burden projection for 2020 and 2040: a systematic review and meta-analysis. , 2014, The Lancet. Global health.

[33]  Ron Kohavi,et al.  A Study of Cross-Validation and Bootstrap for Accuracy Estimation and Model Selection , 1995, IJCAI.

[34]  B. van Ginneken,et al.  Automated detection and differentiation of drusen, exudates, and cotton-wool spots in digital color fundus photographs for diabetic retinopathy diagnosis. , 2007, Investigative ophthalmology & visual science.

[35]  Cemal Köse,et al.  A Statistical Segmentation Method for Measuring Age-Related Macular Degeneration in Retinal Fundus Images , 2010, Journal of Medical Systems.

[36]  Chandan Chakraborty,et al.  Small retinal vessels extraction towards proliferative diabetic retinopathy screening , 2012, Expert Syst. Appl..

[37]  Gwénolé Quellec,et al.  Optimal Filter Framework for Automated, Instantaneous Detection of Lesions in Retinal Images , 2011, IEEE Transactions on Medical Imaging.

[38]  P.T.V.M. de Jong,et al.  Mechanisms of disease: Age-related macular degeneration , 2006 .

[39]  Jennifer R. Evans,et al.  Risk Factors for Age-related Macular Degeneration , 2001, Progress in Retinal and Eye Research.

[40]  Francisco Herrera,et al.  A survey of fingerprint classification Part II , 2015 .

[41]  S T Roweis,et al.  Nonlinear dimensionality reduction by locally linear embedding. , 2000, Science.

[42]  Jennifer I. Lim,et al.  A randomized, placebo-controlled, clinical trial of high-dose supplementation with vitamins C and E, beta carotene, and zinc for age-related macular degeneration and vision loss: AREDS report no. 8. , 2001, Archives of ophthalmology.

[43]  Philippe Burlina,et al.  Automatic screening of age-related macular degeneration and retinal abnormalities , 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[44]  Tommy W. S. Chow,et al.  Automatic image annotation via compact graph based semi-supervised learning , 2015, Knowl. Based Syst..

[45]  Tien Yin Wong,et al.  Early age-related macular degeneration detection by focal biologically inspired feature , 2012, 2012 19th IEEE International Conference on Image Processing.

[46]  Marios S. Pattichis,et al.  Multi-scale AM-FM for lesion phenotyping on age-related macular degeneration , 2009, 2009 22nd IEEE International Symposium on Computer-Based Medical Systems.

[47]  David G. Stork,et al.  Pattern Classification , 1973 .

[48]  H. Santos-Villalobos,et al.  Statistical characterization and segmentation of drusen in fundus images , 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[49]  Hishammuddin Asmuni,et al.  A low lighting or contrast ratio visible iris recognition using iso-contrast limited adaptive histogram equalization , 2015, Knowl. Based Syst..

[50]  Divya Tomar,et al.  A comparison on multi-class classification methods based on least squares twin support vector machine , 2015, Knowl. Based Syst..

[51]  Michalis E. Zervakis,et al.  Detection and segmentation of drusen deposits on human retina: Potential in the diagnosis of age-related macular degeneration , 2003, Medical Image Anal..

[52]  Linda Pring Blindness and visual disability , 2007 .

[53]  D. Verma,et al.  Age related macular degeneration: Authors' reply , 2003, BMJ : British Medical Journal.

[54]  Frans Coenen,et al.  Data Mining for AMD Screening: A Classification Based Approach , 2020 .

[55]  Frans Coenen,et al.  Data mining techniques for the screening of age-related macular degeneration , 2012, Knowl. Based Syst..

[56]  Guoli Ji,et al.  PLS-based recursive feature elimination for high-dimensional small sample , 2014, Knowl. Based Syst..

[57]  Matti Pietikäinen,et al.  Multiresolution Gray-Scale and Rotation Invariant Texture Classification with Local Binary Patterns , 2002, IEEE Trans. Pattern Anal. Mach. Intell..

[58]  Kevin Noronha,et al.  Decision support system for age-related macular degeneration using discrete wavelet transform , 2014, Medical & Biological Engineering & Computing.

[59]  K. Chan,et al.  Towards automatic detection of age-related macular degeneration in retinal fundus images , 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology.

[60]  Parul Ichhpujani,et al.  DIAGNOSTIC AND SURGICAL TECHNIQUES , 2005 .