The influence of soil properties on the structure of bacterial and fungal communities across land-use types

[1]  王征 戴玉成.  真菌生命之树项目（Assembling the Fungal Tree of Life）和美国真菌系统学研究现状 , 2009 .

[2]  Jason E. Stajich,et al.  The Fungi , 2009, Current Biology.

[3]  J. Prosser,et al.  Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots. , 2008, Environmental microbiology.

[4]  S. Allison,et al.  Nitrogen fertilization reduces diversity and alters community structure of active fungi in boreal ecosystems , 2007 .

[5]  G. Casella,et al.  Pyrosequencing enumerates and contrasts soil microbial diversity , 2007, The ISME Journal.

[6]  D. Coleman,et al.  Long-term land-use effects on soil invertebrate communities in Southern Piedmont soils, USA , 2006 .

[7]  P. Högberg,et al.  Is microbial community composition in boreal forest soils determined by pH, C-to-N ratio, the trees, or all three? , 2006, Oecologia.

[8]  J. Thies,et al.  Diversity of Planctomycetes in Soil in Relation to Soil History and Environmental Heterogeneity , 2006, Applied and Environmental Microbiology.

[9]  Philip Hugenholtz,et al.  NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes , 2006, Nucleic Acids Res..

[10]  J. Six,et al.  Bacterial and Fungal Contributions to Carbon Sequestration in Agroecosystems , 2006 .

[11]  P. Millard,et al.  Investigating microbial community structure in soils by physiological, biochemical and molecular fingerprinting methods , 2006 .

[12]  Eoin L. Brodie,et al.  Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB , 2006, Applied and Environmental Microbiology.

[13]  R. B. Jackson,et al.  The diversity and biogeography of soil bacterial communities. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[14]  W. Boer,et al.  Fungal biomass development in a chronosequence of land abandonment , 2006 .

[15]  Forest Rohwer,et al.  FastGroupII: A web-based bioinformatics platform for analyses of large 16S rDNA libraries , 2006, BMC Bioinformatics.

[16]  R. Knight,et al.  UniFrac: a New Phylogenetic Method for Comparing Microbial Communities , 2005, Applied and Environmental Microbiology.

[17]  J. Spatafora.  Assembling The Fungal Tree of Life (AFTOL) , 2005 .

[18]  R. B. Jackson,et al.  Assessment of Soil Microbial Community Structure by Use of Taxon-Specific Quantitative PCR Assays , 2005, Applied and Environmental Microbiology.

[19]  K. Treseder.  A meta-analysis of mycorrhizal responses to nitrogen, phosphorus, and atmospheric CO2 in field studies. , 2004, The New phytologist.

[20]  D. Hibbett,et al.  Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. , 2004, American journal of botany.

[21]  S. Frey,et al.  Chronic nitrogen enrichment affects the structure and function of the soil microbial community in temperate hardwood and pine forests , 2004 .

[22]  Robert C. Edgar,et al.  MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.

[23]  A. Heinemeyer,et al.  Impact of soil warming and shading on colonization and community structure of arbuscular mycorrhizal fungi in roots of a native grassland community , 2004 .

[24]  E. Bååth,et al.  Comparison of soil fungal/bacterial ratios in a pH gradient using physiological and PLFA-based techniques , 2003 .

[25]  K. Scow,et al.  DNA fingerprinting reveals links among agricultural crops, soil properties, and the composition of soil microbial communities , 2003 .

[26]  J. Pretty,et al.  Soil Type Is the Primary Determinant of the Composition of the Total and Active Bacterial Communities in Arable Soils , 2003, Applied and Environmental Microbiology.

[27]  L. Jackson,et al.  Soil microbial community composition and land use history in cultivated and grassland ecosystems of coastal California , 2002 .

[28]  Andrew P. Martin.  Phylogenetic Approaches for Describing and Comparing the Diversity of Microbial Communities , 2002, Applied and Environmental Microbiology.

[29]  V. Bailey,et al.  Fungal-to-Bacterial Ratios in Soils Investigated for Enhanced C Sequestration , 2002 .

[30]  Ross E. McMurtrie,et al.  Does conversion of forest to agricultural land change soil carbon and nitrogen? a review of the literature , 2002 .

[31]  J. Hughes,et al.  Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity , 2001, Applied and Environmental Microbiology.

[32]  K. R. Clarke,et al.  A further biodiversity index applicable to species lists: variation in taxonomic distinctness , 2001 .

[33]  Daniel Markewitz,et al.  Understanding Soil Change—Soil Sustainability over Millennia, Centuries, and Decades , 2001 .

[34]  K. Paustian,et al.  Influence of microbial populations and residue quality on aggregate stability , 2001 .

[35]  R. B. Jackson,et al.  Global biodiversity scenarios for the year 2100. , 2000, Science.

[36]  R. Bardgett,et al.  The measurement of soil fungal:bacterial biomass ratios as an indicator of ecosystem self-regulation in temperate meadow grasslands , 1999, Biology and Fertility of Soils.

[37]  E. Smit,et al.  Analysis of Fungal Diversity in the Wheat Rhizosphere by Sequencing of Cloned PCR-Amplified Genes Encoding 18S rRNA and Temperature Gradient Gel Electrophoresis , 1999, Applied and Environmental Microbiology.

[38]  J. Prosser,et al.  Molecular Analysis of Bacterial Community Structure and Diversity in Unimproved and Improved Upland Grass Pastures , 1999, Applied and Environmental Microbiology.

[39]  L. Øvreås,et al.  Microbial Diversity and Community Structure in Two Different Agricultural Soil Communities , 1998, Microbial Ecology.

[40]  E. Blagodatskaya,et al.  Interactive effects of pH and substrate quality on the fungal-to-bacterial ratio and QCO2 of microbial communities in forest soils , 1998 .

[41]  D. Bossio,et al.  Determinants of Soil Microbial Communities: Effects of Agricultural Management, Season, and Soil Type on Phospholipid Fatty Acid Profiles , 1998, Microbial Ecology.

[42]  N. Pace.  A molecular view of microbial diversity and the biosphere. , 1997, Science.

[43]  G. Kowalchuk,et al.  Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments , 1997, Applied and environmental microbiology.

[44]  D. Sparks,et al.  Methods of soil analysis. Part 3 - chemical methods. , 1996 .

[45]  H. Fritze,et al.  MICROBIAL COMMUNITY STRUCTURE AND pH RESPONSE IN RELATION TO SOIL ORGANIC MATTER QUALITY IN WOOD-ASH FERTILIZED, CLEAR-CUT OR BURNED CONIFEROUS FOREST SOILS , 1995 .

[46]  M. R. Carter,et al.  Soil Sampling and Methods of Analysis , 1993 .

[47]  E. Bååth,et al.  Shifts in the structure of soil microbial communities in limed forests as revealed by phospholipid fatty acid analysis , 1993 .

[48]  F. Beese,et al.  Signature fatty acids in phospholipids and lipopolysaccharides as indicators of microbial biomass and community structure in agricultural soils , 1992 .

[49]  D. Lane.  16S/23S rRNA sequencing , 1991 .

[50]  E. Stackebrandt,et al.  Nucleic acid techniques in bacterial systematics , 1991 .

[51]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[52]  Martha Christensen,et al.  A View of Fungal Ecology , 1989 .

[53]  D. Coleman,et al.  Detritus Food Webs in Conventional and No-tillage Agroecosystems , 1986 .

[54]  M. Swift,et al.  Decomposer Basidiomycetes: Their Biology and Ecology , 1983 .

[55]  J. Frankland,et al.  Decomposer basidiomycetes : their biology and ecology : symposium of the British Mycological Society, held at Queen Mary College, London, March 1979 , 1982 .

[56]  I C Edmundson,et al.  Particle size analysis , 2013 .