Artificial Intelligence Algorithms for Analysis of Geographic Atrophy: A Review and Evaluation

Purpose The purpose of this study was to summarize and evaluate artificial intelligence (AI) algorithms used in geographic atrophy (GA) diagnostic processes (e.g. isolating lesions or disease progression). Methods The search strategy and selection of publications were both conducted in accordance with the Preferred of the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines. PubMed and Web of Science were used to extract literary data. The algorithms were summarized by objective, performance, and scope of coverage of GA diagnosis (e.g. lesion automation and GA progression). Results Twenty-seven studies were identified for this review. A total of 18 publications focused on lesion segmentation only, 2 were designed to detect and classify GA, 2 were designed to predict future overall GA progression, 3 focused on prediction of future spatial GA progression, and 2 focused on prediction of visual function in GA. GA-related algorithms reported sensitivities from 0.47 to 0.98, specificities from 0.73 to 0.99, accuracies from 0.42 to 0.995, and Dice coefficients from 0.66 to 0.89. Conclusions Current GA-AI publications have a predominant focus on lesion segmentation and a minor focus on classification and progression analysis. AI could be applied to other facets of GA diagnoses, such as understanding the role of hyperfluorescent areas in GA. Using AI for GA has several advantages, including improved diagnostic accuracy and faster processing speeds. Translational Relevance AI can be used to quantify GA lesions and therefore allows one to impute visual function and quality-of-life. However, there is a need for the development of reliable and objective models and software to predict the rate of GA progression and to quantify improvements due to interventions.

[1]  Jens Dreyhaupt,et al.  Progression of geographic atrophy and impact of fundus autofluorescence patterns in age-related macular degeneration. , 2007, American journal of ophthalmology.

[2]  Hyunjin Park,et al.  Geographic atrophy segmentation in SD-OCT images using synthesized fundus autofluorescence imaging , 2019, Comput. Methods Programs Biomed..

[3]  Ron Kikinis,et al.  Statistical validation of image segmentation quality based on a spatial overlap index. , 2004, Academic radiology.

[4]  Srinivas R. Sadda,et al.  Automated Geographic Atrophy Segmentation in Infrared Reflectance Images Using Deep Convolutional Neural Networks , 2018 .

[5]  Glenn J Jaffe,et al.  Growth of geographic atrophy in the comparison of age-related macular degeneration treatments trials. , 2015, Ophthalmology.

[6]  Ursula Schmidt-Erfurth,et al.  INVESTIGATING A GROWTH PREDICTION MODEL IN ADVANCED AGE-RELATED MACULAR DEGENERATION WITH SOLITARY GEOGRAPHIC ATROPHY USING QUANTITATIVE AUTOFLUORESCENCE. , 2020, Retina.

[7]  D. Rubin,et al.  Semi-automatic geographic atrophy segmentation for SD-OCT images. , 2013, Biomedical optics express.

[8]  D. Moher,et al.  Preferred reporting items for systematic reviews and meta-analyses: the PRISMA Statement , 2009, BMJ : British Medical Journal.

[9]  D. Moher,et al.  Preferred reporting items for systematic reviews and meta-analyses: the PRISMA statement. , 2009, Journal of clinical epidemiology.

[10]  James T. Handa,et al.  AUTOMATED IMAGE ALIGNMENT AND SEGMENTATION TO FOLLOW PROGRESSION OF GEOGRAPHIC ATROPHY IN AGE-RELATED MACULAR DEGENERATION , 2014, Retina.

[11]  Thomas P. Karnowski,et al.  Geographic atrophy segmentation in infrared and autofluorescent retina images using supervised learning , 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[12]  Paul S. Bernstein,et al.  Nutrient Supplementation for Age-related Macular Degeneration, Cataract, and Dry Eye , 2014, Journal of ophthalmic & vision research.

[13]  U. Mansmann,et al.  Automated analysis of digital fundus autofluorescence images of geographic atrophy in advanced age-related macular degeneration using confocal scanning laser ophthalmoscopy (cSLO) , 2005, BMC ophthalmology.

[14]  Steffen Schmitz-Valckenberg,et al.  Determinants of cone- and rod-function in geographic atrophy: AI-based structure-function correlation. , 2020, American journal of ophthalmology.

[15]  Bram van Ginneken,et al.  A deep learning model for segmentation of geographic atrophy to study its long-term natural history , 2019, ArXiv.

[16]  Chong Wang,et al.  Automatic segmentation of nine retinal layer boundaries in OCT images of non-exudative AMD patients using deep learning and graph search. , 2017, Biomedical optics express.

[17]  Steffen Schmitz-Valckenberg,et al.  Imaging Geographic Atrophy in Age-Related Macular Degeneration , 2011, Ophthalmologica.

[18]  Luis Perez,et al.  The Effectiveness of Data Augmentation in Image Classification using Deep Learning , 2017, ArXiv.

[19]  Marcelo Dias,et al.  Sensitivity and specificity of machine learning classifiers for glaucoma diagnosis using Spectral Domain OCT and standard automated perimetry. , 2013, Arquivos brasileiros de oftalmologia.

[20]  Sharon D. Solomon,et al.  Anti-vascular endothelial growth factor for neovascular age-related macular degeneration. , 2019, The Cochrane database of systematic reviews.

[21]  Nadia K. Waheed,et al.  Choriocapillaris changes in dry age-related macular degeneration and geographic atrophy: a review , 2018, Eye and Vision.

[22]  Qiang Chen,et al.  Automated geographic atrophy segmentation for SD-OCT images using region-based C-V model via local similarity factor. , 2016, Biomedical optics express.

[23]  N. Lee,et al.  Interactive segmentation for geographic atrophy in retinal fundus images , 2008, 2008 42nd Asilomar Conference on Signals, Systems and Computers.

[24]  Janan Arslan,et al.  Changing vision: a review of pharmacogenetic studies for treatment response in age-related macular degeneration patients. , 2018, Pharmacogenomics.

[25]  Paul Mitchell,et al.  The Progression of Geographic Atrophy Secondary to Age-Related Macular Degeneration. , 2017, Ophthalmology.

[26]  Philippe Burlina,et al.  Automated segmentation of geographic atrophy of the retinal epithelium via random forests in AREDS color fundus images , 2015, Comput. Biol. Medicine.

[27]  Carrie Huisingh,et al.  Histologic basis of variations in retinal pigment epithelium autofluorescence in eyes with geographic atrophy. , 2013, Ophthalmology.

[28]  Steffen Schmitz-Valckenberg,et al.  PROGNOSTIC VALUE OF SHAPE-DESCRIPTIVE FACTORS FOR THE PROGRESSION OF GEOGRAPHIC ATROPHY SECONDARY TO AGE-RELATED MACULAR DEGENERATION. , 2019, Retina.

[29]  Kun Gao,et al.  Multi-path 3D Convolution Neural Network for Automated Geographic Atrophy Segmentation in SD-OCT Images , 2018, ICIC.

[30]  Zhihong Hu,et al.  Segmentation of the geographic atrophy in spectral-domain optical coherence tomography and fundus autofluorescence images. , 2013, Investigative ophthalmology & visual science.

[31]  Geza Benke,et al.  Artificial Intelligence and Big Data in Public Health , 2018, International journal of environmental research and public health.

[32]  Steffen Schmitz-Valckenberg,et al.  Geographic atrophy: clinical features and potential therapeutic approaches. , 2014, Ophthalmology.

[33]  Qiang Chen,et al.  Beyond Retinal Layers: A Deep Voting Model for Automated Geographic Atrophy Segmentation in SD-OCT Images , 2018, Translational vision science & technology.

[34]  David Gal,et al.  Abandon Statistical Significance , 2017, The American Statistician.

[35]  Danielle B. Gutierrez,et al.  Quantitative autofluorescence and cell density maps of the human retinal pigment epithelium. , 2014, Investigative ophthalmology & visual science.

[36]  Carlo Tomasi,et al.  Tree Topology Estimation , 2015, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[37]  Amir Sadeghipour,et al.  Artificial intelligence in retina , 2018, Progress in Retinal and Eye Research.

[38]  Subhashini Venugopalan,et al.  Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs. , 2016, JAMA.

[39]  Srinivas R Sadda,et al.  Multimodal Imaging of Nonneovascular Age-Related Macular Degeneration. , 2018, Investigative ophthalmology & visual science.

[40]  I. Bhutto,et al.  Understanding age-related macular degeneration (AMD): relationships between the photoreceptor/retinal pigment epithelium/Bruch's membrane/choriocapillaris complex. , 2012, Molecular aspects of medicine.

[41]  Gérard G. Medioni,et al.  Supervised pixel classification for segmenting geographic atrophy in fundus autofluorescene images , 2014, Medical Imaging.

[42]  Steffen Schmitz-Valckenberg,et al.  Distinct Genetic Risk Profile of the Rapidly Progressing Diffuse-Trickling Subtype of Geographic Atrophy in Age-Related Macular Degeneration (AMD). , 2016, Investigative ophthalmology & visual science.

[43]  Arthur R. Weeks Fundamentals of electronic image processing , 1996, SPIE/IEEE series on imaging science and engineering.

[44]  Yifan Peng,et al.  A deep learning approach for automated detection of geographic atrophy from color fundus photographs , 2019, Ophthalmology.

[45]  Jost Lennart Lauermann,et al.  Deep learning-based detection and classification of geographic atrophy using a deep convolutional neural network classifier , 2018, Graefe's Archive for Clinical and Experimental Ophthalmology.

[46]  Yuehui Chen,et al.  Automated geographic atrophy segmentation for SD-OCT images based on two-stage learning model , 2019, Comput. Biol. Medicine.

[47]  S. Bini Artificial Intelligence, Machine Learning, Deep Learning, and Cognitive Computing: What Do These Terms Mean and How Will They Impact Health Care? , 2018, The Journal of arthroplasty.

[48]  R. Klein,et al.  Global prevalence of age-related macular degeneration and disease burden projection for 2020 and 2040: a systematic review and meta-analysis. , 2014, The Lancet. Global health.

[49]  Steffen Staab,et al.  Web Science , 2013, Informatik-Spektrum.

[50]  G. Ying,et al.  Growth of geographic atrophy in the comparison of age-related macular degeneration treatments trials. , 2015, Ophthalmology.

[51]  Kurt K Benke,et al.  Deep Learning Algorithms and the Protection of Data Privacy. , 2020, JAMA ophthalmology.

[52]  Masahiro Akiba,et al.  Automated geographic atrophy detection in OCT volumes , 2018 .

[53]  Srinivas R. Sadda,et al.  Automated segmentation of geographic atrophy using deep convolutional neural networks , 2018, Medical Imaging.

[54]  Matthias Schulze,et al.  An efficient encoder-decoder CNN architecture for reliable multilane detection in real time , 2018, 2018 IEEE Intelligent Vehicles Symposium (IV).

[55]  Luis de Sisternes,et al.  Fully Automated Prediction of Geographic Atrophy Growth Using Quantitative Spectral-Domain Optical Coherence Tomography Biomarkers. , 2016, Ophthalmology.

[56]  Steffen Schmitz-Valckenberg,et al.  Type 1 Choroidal Neovascularization Is Associated with Reduced Localized Progression of Atrophy in Age-Related Macular Degeneration. , 2019, Ophthalmology. Retina.

[57]  Steffen Schmitz-Valckenberg,et al.  Determinants of Quality of Life in Geographic Atrophy Secondary to Age-Related Macular Degeneration , 2020, Investigative ophthalmology & visual science.

[58]  Ursula Schmidt-Erfurth,et al.  Role of deep learning quantified hyperreflective foci for the prediction of geographic atrophy progression. , 2020, American journal of ophthalmology.

[59]  Zhihong Hu,et al.  Automated segmentation of geographic atrophy in fundus autofluorescence images using supervised pixel classification , 2015, Journal of medical imaging.

[60]  Giuseppe Querques,et al.  MultiColor imaging in the evaluation of geographic atrophy due to age-related macular degeneration , 2014, British Journal of Ophthalmology.

[61]  M. Abràmoff,et al.  Pivotal trial of an autonomous AI-based diagnostic system for detection of diabetic retinopathy in primary care offices , 2018, npj Digital Medicine.

[62]  G. Dumancas Comparison of machine-learning techniques for handling multicollinearity in big data analytics and high-performance data mining , 2015 .

[63]  Ursula Schmidt-Erfurth,et al.  THE PATHOPHYSIOLOGY OF GEOGRAPHIC ATROPHY SECONDARY TO AGE-RELATED MACULAR DEGENERATION AND THE COMPLEMENT PATHWAY AS A THERAPEUTIC TARGET , 2017, Retina.