Automated detection of age-related macular degeneration using empirical mode decomposition

Fundus images are converted to 1D signals using Radon transform.Empirical Mode Decomposition (EMD) is applied on the 1D signal.Nonlinear features are extracted from IMFs derived from EMD.Various ranking methods are used to identify optimal features.Classification accuracy of 100% is obtained for STARE database. Age-related Macular Degeneration (AMD) is the posterior segment eye disease affecting elderly people and may lead to loss of vision. AMD is diagnosed using clinical features like drusen, Geographic Atrophy (GA) and Choroidal NeoVascularization (CNV) present in the fundus image. It is mainly classified into dry and wet type. Dry AMD is most common among elderly people. At present there is no treatment available for dry AMD. Early diagnosis and treatment to the affected eye may reduce the progression of disease. Manual screening of fundus images is time consuming and subjective. Hence in this study we are proposing an Empirical Mode Decomposition (EMD)-based nonlinear feature extraction to characterize and classify normal and AMD fundus images. EMD is performed on 1D Radon Transform (RT) projections to generate different Intrinsic Mode Functions (IMF). Various nonlinear features are extracted from the IMFs. The dimensionality of the extracted features are reduced using Locality Sensitive Discriminant Analysis (LSDA). Then the reduced LSDA features are ranked using minimum Redundancy Maximum Relevance (mRMR), Kullback-Leibler Divergence (KLD) and Chernoff Bound and Bhattacharyya Distance (CBBD) techniques. Ranked LSDA components are sequentially fed to Support Vector Machine (SVM) classifier to discriminate normal and AMD classes. The performance of the current study is experimented using private and two public datasets namely Automated Retinal Image Analysis (ARIA) and STructured Analysis of the Retina (STARE). The 10-fold cross validation approach is used to evaluate the performance of the classifiers and obtained highest average classification accuracy of 100%, sensitivity of 100% and specificity of 100% for STARE dataset using only two ranked LSDA components. Our results reveal that the proposed system can be used as a decision support tool for clinicians for mass AMD screening.

[1]  David G. Stork,et al.  Pattern Classification , 1973 .

[2]  A. Bhuiyan,et al.  A Review of Disease Grading and Remote Diagnosis for Sight Threatening Eye Condition: Age Related Macular Degeneration , 2014 .

[3]  Frans Coenen,et al.  Data mining techniques for the screening of age-related macular degeneration , 2012, Knowl. Based Syst..

[4]  U. Rajendra Acharya,et al.  Non-linear analysis of EEG signals at various sleep stages , 2005, Comput. Methods Programs Biomed..

[5]  Philippe Burlina,et al.  Automated detection of drusen in the macula , 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[6]  U. Rajendra Acharya,et al.  Author's Personal Copy Biomedical Signal Processing and Control Automated Diagnosis of Epileptic Eeg Using Entropies , 2022 .

[7]  U. Rajendra Acharya,et al.  Application of Recurrence Quantification Analysis for the Automated Identification of Epileptic EEG Signals , 2011, Int. J. Neural Syst..

[8]  Frans Coenen,et al.  Data Mining for AMD Screening: A Classification Based Approach , 2020 .

[9]  U. Rajendra Acharya,et al.  AUTOMATIC IDENTIFICATION OF EPILEPTIC EEG SIGNALS USING NONLINEAR PARAMETERS , 2009 .

[10]  Philippe Burlina,et al.  Automatic screening of age-related macular degeneration and retinal abnormalities , 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[11]  Frans Coenen,et al.  Retinal image classification using a histogram based approach , 2010, The 2010 International Joint Conference on Neural Networks (IJCNN).

[12]  Uğur Şevik,et al.  Automatic segmentation of age-related macular degeneration in retinal fundus images , 2008, Comput. Biol. Medicine.

[13]  Toshihisa Tanaka,et al.  Complex Empirical Mode Decomposition , 2007, IEEE Signal Processing Letters.

[14]  N. Huang,et al.  The empirical mode decomposition and the Hilbert spectrum for nonlinear and non-stationary time series analysis , 1998, Proceedings of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences.

[15]  Kevin Noronha,et al.  Local configuration pattern features for age-related macular degeneration characterization and classification , 2015, Comput. Biol. Medicine.

[16]  Danilo P. Mandic,et al.  Empirical Mode Decomposition-Based Time-Frequency Analysis of Multivariate Signals: The Power of Adaptive Data Analysis , 2013, IEEE Signal Processing Magazine.

[17]  Victor Murray,et al.  Automatic detection of diabetic retinopathy and age-related macular degeneration in digital fundus images. , 2011, Investigative ophthalmology & visual science.

[18]  P.T.V.M. de Jong,et al.  Mechanisms of disease: Age-related macular degeneration , 2006 .

[19]  Ayyakkannu Manivannan,et al.  Automated drusen detection in retinal images using analytical modelling algorithms , 2011, Biomedical engineering online.

[20]  Dattatray V. Jadhav,et al.  Feature extraction using Radon and wavelet transforms with application to face recognition , 2009, Neurocomputing.

[21]  Jean Claude Nunes,et al.  Texture analysis based on local analysis of the Bidimensional Empirical Mode Decomposition , 2005, Machine Vision and Applications.

[22]  Frank Eperjesi,et al.  Use of fundus imaging in quantification of age-related macular change. , 2007, Survey of ophthalmology.

[23]  Kun Zhou,et al.  Locality Sensitive Discriminant Analysis , 2007, IJCAI.

[24]  U. Rajendra Acharya,et al.  Application of Entropy Measures on Intrinsic Mode Functions for the Automated Identification of Focal Electroencephalogram Signals , 2015, Entropy.

[25]  B. van Ginneken,et al.  Automated detection and differentiation of drusen, exudates, and cotton-wool spots in digital color fundus photographs for diabetic retinopathy diagnosis. , 2007, Investigative ophthalmology & visual science.

[26]  K. Chan,et al.  Towards automatic detection of age-related macular degeneration in retinal fundus images , 2010, 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology.

[27]  Baihua Li,et al.  Automatic extraction of retinal features from colour retinal images for glaucoma diagnosis: A review , 2013, Comput. Medical Imaging Graph..

[28]  J. Radon On the determination of functions from their integral values along certain manifolds , 1986, IEEE Transactions on Medical Imaging.

[29]  U. Rajendra Acharya,et al.  Application of Empirical Mode Decomposition (EMD) for Automated Detection of epilepsy using EEG signals , 2012, Int. J. Neural Syst..

[30]  Chrysostomos L. Nikias,et al.  Higher-order spectral analysis , 1993, Proceedings of the 15th Annual International Conference of the IEEE Engineering in Medicine and Biology Societ.

[31]  R. Klein,et al.  The Wisconsin age-related maculopathy grading system. , 1991, Ophthalmology.

[32]  Gwénolé Quellec,et al.  Optimal Filter Framework for Automated, Instantaneous Detection of Lesions in Retinal Images , 2011, IEEE Transactions on Medical Imaging.

[33]  V. Cipriani,et al.  Age-related macular degeneration and the complement system. , 2012, Immunobiology.

[34]  U. Rajendra Acharya,et al.  Empirical mode decomposition analysis of near-infrared spectroscopy muscular signals to assess the effect of physical activity in type 2 diabetic patients , 2015, Comput. Biol. Medicine.

[35]  H. Santos-Villalobos,et al.  Statistical characterization and segmentation of drusen in fundus images , 2011, 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[36]  Anil K. Jain,et al.  Statistical Pattern Recognition: A Review , 2000, IEEE Trans. Pattern Anal. Mach. Intell..

[37]  D. Verma,et al.  Age related macular degeneration: Authors' reply , 2003, BMJ : British Medical Journal.

[38]  Guoqing Li,et al.  Tsallis Wavelet Entropy and Its Application in Power Signal Analysis , 2014, Entropy.

[39]  Michalis E. Zervakis,et al.  Detection and segmentation of drusen deposits on human retina: Potential in the diagnosis of age-related macular degeneration , 2003, Medical Image Anal..

[40]  Gamini Dissanayake,et al.  Driver Drowsiness Classification Using Fuzzy Wavelet-Packet-Based Feature-Extraction Algorithm , 2011, IEEE Transactions on Biomedical Engineering.

[41]  Fuhui Long,et al.  Feature selection based on mutual information criteria of max-dependency, max-relevance, and min-redundancy , 2003, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[42]  Richard A. Robb,et al.  Proceedings of the 15th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. Part 3 (of 3) , 1993 .

[43]  U. Rajendra Acharya,et al.  Application of empirical mode decomposition for analysis of normal and diabetic RR-interval signals , 2015, Expert Syst. Appl..

[44]  Cemal Köse,et al.  A Statistical Segmentation Method for Measuring Age-Related Macular Degeneration in Retinal Fundus Images , 2010, Journal of Medical Systems.

[45]  Madhuchhanda Mitra,et al.  Empirical mode decomposition based ECG enhancement and QRS detection , 2012, Comput. Biol. Medicine.

[46]  Tien Yin Wong,et al.  Early age-related macular degeneration detection by focal biologically inspired feature , 2012, 2012 19th IEEE International Conference on Image Processing.

[47]  Marios S. Pattichis,et al.  Multi-scale AM-FM for lesion phenotyping on age-related macular degeneration , 2009, 2009 22nd IEEE International Symposium on Computer-Based Medical Systems.

[48]  P. Soliz,et al.  Independent Component Analysis for Vision-inspired Classification of Retinal Images with Age-related Macular Degeneration , 2008, 2008 IEEE Southwest Symposium on Image Analysis and Interpretation.

[49]  Jordi Vitrià,et al.  On the Selection and Classification of Independent Features , 2003, IEEE Trans. Pattern Anal. Mach. Intell..

[50]  U. Rajendra Acharya,et al.  Computer-aided diagnosis of diabetic retinopathy: A review , 2013, Comput. Biol. Medicine.

[51]  G. Coscas,et al.  A new approach of geodesic reconstruction for drusen segmentation in eye fundus images , 2001, IEEE Transactions on Medical Imaging.

[52]  Kevin Noronha,et al.  Automated diagnosis of Age-related Macular Degeneration using greyscale features from digital fundus images , 2014, Comput. Biol. Medicine.

[53]  C. M. Lim,et al.  Application of higher order statistics/spectra in biomedical signals--a review. , 2010, Medical engineering & physics.

[54]  Xiaogang Wang,et al.  Stable locality sensitive discriminant analysis for image recognition , 2014, Neural Networks.

[55]  Lotfi Senhadji,et al.  Multivariate empirical mode decomposition and application to multichannel filtering , 2011, Signal Process..

[56]  Adam W. Hoover,et al.  Drusen Detection in a Retinal Image Using Multi-level Analysis , 2003, MICCAI.

[57]  Kevin Noronha,et al.  Decision support system for age-related macular degeneration using discrete wavelet transform , 2014, Medical & Biological Engineering & Computing.

[58]  Frans Coenen,et al.  Automated "disease/no disease" grading of age-related macular degeneration by an image mining approach. , 2012, Investigative ophthalmology & visual science.

[59]  John D. Austin,et al.  Adaptive histogram equalization and its variations , 1987 .