LOVely enzymes – towards engineering light‐controllable biocatalysts

Light control over enzyme function represents a novel and exciting field of biocatalysis research. Blue‐light photoreceptors of the Light, Oxygen, Voltage (LOV) family have recently been investigated for their applicability as photoactive switches. We discuss here the primary photochemical events leading to light activation of LOV domains as well as the proposed signal propagation mechanism to the respective effector domain. Furthermore, we describe the construction of LOV fusions to different effector domains, namely a dihydrofolate reductase from Escherichia coli and a lipase from Bacillus subtilis. Both fusion partners retained functionality, and alteration of enzyme activity by light was also demonstrated. Hence, it appears that fusion of LOV photoreceptors to functional enzyme target sites via appropriate linker structures may represent a straightforward strategy to design light controllable biocatalysts.

[1]  Stefan R. Pulver,et al.  Temporal dynamics of neuronal activation by Channelrhodopsin-2 and TRPA1 determine behavioral output in Drosophila larvae. , 2009, Journal of neurophysiology.

[2]  Michael Z. Lin,et al.  Characterization of engineered channelrhodopsin variants with improved properties and kinetics. , 2009, Biophysical journal.

[3]  Andrew A. Beharry,et al.  Spectral tuning of azobenzene photoswitches for biological applications. , 2009, Angewandte Chemie.

[4]  Rebecca A. Ayers,et al.  Design and signaling mechanism of light‐regulated histidine kinases , 2009, Journal of molecular biology.

[5]  J. Pelletier,et al.  Mutational 'hot-spots' in mammalian, bacterial and protozoal dihydrofolate reductases associated with antifolate resistance: sequence and structural comparison. , 2009, Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy.

[6]  E. Buchner,et al.  Stimulating PACα Increases Miniature Excitatory Junction Potential Frequency at the Drosophila Neuromuscular Junction , 2009, Journal of neurogenetics.

[7]  W. P. Russ,et al.  Surface Sites for Engineering Allosteric Control in Proteins , 2008, Science.

[8]  Ehud Y. Isacoff,et al.  Optical Switches for Remote and Noninvasive Control of Cell Signaling , 2008, Science.

[9]  A. Losi,et al.  Bacterial bilin- and flavin-binding photoreceptors , 2008, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

[10]  K. Moffat,et al.  Light-activated DNA binding in a designed allosteric protein , 2008, Proceedings of the National Academy of Sciences.

[11]  K. Gardner,et al.  Estimation of the available free energy in a LOV2-J alpha photoswitch. , 2008, Nature chemical biology.

[12]  Z. Cao,et al.  A blue light inducible two-component signal transduction system in the plant pathogen Pseudomonas syringae pv. tomato. , 2008, Biophysical journal.

[13]  M. A. van der Horst,et al.  Photosensing in chemotrophic, non-phototrophic bacteria: let there be light sensing too. , 2007, Trends in microbiology.

[14]  M. Yamada,et al.  Photocontrol of kinesin ATPase activity using an azobenzene derivative. , 2007, Journal of biochemistry.

[15]  Keith Moffat,et al.  N- and C-terminal flanking regions modulate light-induced signal transduction in the LOV2 domain of the blue light sensor phototropin 1 from Avena sativa. , 2007, Biochemistry.

[16]  A. Losi,et al.  Flavin‐based Blue‐light Photosensors: A Photobiophysics Update , 2007, Photochemistry and photobiology.

[17]  Andreas Möglich,et al.  Structural basis for light-dependent signaling in the dimeric LOV domain of the photosensor YtvA. , 2007, Journal of molecular biology.

[18]  Takeshi Suzuki,et al.  Functional transplant of photoactivated adenylyl cyclase (PAC) into Aplysia sensory neurons , 2007, Neuroscience Research.

[19]  Feng Zhang,et al.  Multimodal fast optical interrogation of neural circuitry , 2007, Nature.

[20]  E. Isacoff,et al.  Reversibly caged glutamate: a photochromic agonist of ionotropic glutamate receptors. , 2007, Journal of the American Chemical Society.

[21]  Z. Cao,et al.  Conformational analysis of the blue-light sensing protein YtvA reveals a competitive interface for LOV—LOV dimerization and interdomain interactions , 2007, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

[22]  Masakatsu Watanabe,et al.  Fast manipulation of cellular cAMP level by light in vivo , 2007, Nature Methods.

[23]  K. Deisseroth,et al.  Circuit-breakers: optical technologies for probing neural signals and systems , 2007, Nature Reviews Neuroscience.

[24]  Dirk Trauner,et al.  Engineering light-gated ion channels. , 2006, Biochemistry.

[25]  D. Häder,et al.  Heterologous Expression of Photoactivated Adenylyl Cyclase (PAC) Genes from the Flagellate Euglena gracilis in Insect Cells , 2006, Photochemistry and photobiology.

[26]  S. Benkovic,et al.  Relating protein motion to catalysis. , 2006, Annual review of biochemistry.

[27]  E. Bamberg,et al.  Light Activation of Channelrhodopsin-2 in Excitable Cells of Caenorhabditis elegans Triggers Rapid Behavioral Responses , 2005, Current Biology.

[28]  Shy Shoham,et al.  Rapid neurotransmitter uncaging in spatially defined patterns , 2005, Nature Methods.

[29]  K. Deisseroth,et al.  Millisecond-timescale, genetically targeted optical control of neural activity , 2005, Nature Neuroscience.

[30]  Takeshi Suzuki,et al.  Kinetic analysis of the activation of photoactivated adenylyl cyclase (PAC), a blue-light receptor for photomovements of Euglena , 2005, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

[31]  U Krauss,et al.  Initial characterization of a blue-light sensing, phototropin-related protein from Pseudomonas putida: a paradigm for an extended LOV construct. , 2005, Physical chemistry chemical physics : PCCP.

[32]  L. Aravind,et al.  The many faces of the helix-turn-helix domain: transcription regulation and beyond. , 2005, FEMS microbiology reviews.

[33]  Maurice Goeldner,et al.  Dynamic studies in biology : phototriggers, photoswitches and caged biomolecules , 2005 .

[34]  K. Wakabayashi,et al.  Incorporation of an azobenzene derivative into the energy transducing site of skeletal muscle myosin results in photo-induced conformational changes. , 2004, Journal of biochemistry.

[35]  K. Gardner,et al.  Disruption of the LOV-Jalpha helix interaction activates phototropin kinase activity. , 2004, Biochemistry.

[36]  A. Losi The bacterial counterparts of plant phototropins , 2004, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

[37]  Peter E Wright,et al.  Structure, dynamics, and catalytic function of dihydrofolate reductase. , 2004, Annual review of biophysics and biomolecular structure.

[38]  B. Volkman,et al.  Cdc42 regulates the Par-6 PDZ domain through an allosteric CRIB-PDZ transition. , 2004, Molecular cell.

[39]  Ray Dixon,et al.  The PAS fold. A redefinition of the PAS domain based upon structural prediction. , 2004, European journal of biochemistry.

[40]  Rama Ranganathan,et al.  Allosteric determinants in guanine nucleotide-binding proteins , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[41]  E. Bamberg,et al.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[42]  Kevin H. Gardner,et al.  Structural Basis of a Phototropin Light Switch , 2003, Science.

[43]  P. Hegemann,et al.  Crystal structures and molecular mechanism of a light-induced signaling switch: The Phot-LOV1 domain from Chlamydomonas reinhardtii. , 2003, Biophysical journal.

[44]  B. Zemelman,et al.  Photochemical gating of heterologous ion channels: Remote control over genetically designated populations of neurons , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[45]  Keith Moffat,et al.  The LOV domain family: photoresponsive signaling modules coupled to diverse output domains. , 2003, Biochemistry.

[46]  Mark Gomelsky,et al.  BLUF: a novel FAD-binding domain involved in sensory transduction in microorganisms. , 2002, Trends in biochemical sciences.

[47]  Wolfgang Gärtner,et al.  First evidence for phototropin-related blue-light receptors in prokaryotes. , 2002, Biophysical journal.

[48]  Keith Moffat,et al.  Photoexcited Structure of a Plant Photoreceptor Domain Reveals a Light-Driven Molecular Switch Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.010475. , 2002, The Plant Cell Online.

[49]  Masakatsu Watanabe,et al.  A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis , 2002, Nature.

[50]  B. Dijkstra,et al.  Lipolytic enzymes LipA and LipB from Bacillus subtilis differ in regulation of gene expression, biochemical properties, and three‐dimensional structure , 2001, FEBS letters.

[51]  K. Moffat,et al.  Structure of a flavin-binding plant photoreceptor domain: Insights into light-mediated signal transduction , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[52]  J. Christie,et al.  Photochemical and mutational analysis of the FMN-binding domains of the plant blue light receptor, phototropin. , 2000, Biochemistry.

[53]  J. Christie,et al.  LOV (light, oxygen, or voltage) domains of the blue-light photoreceptor phototropin (nph1): binding sites for the chromophore flavin mononucleotide. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[54]  I. Zhulin,et al.  PAS Domains: Internal Sensors of Oxygen, Redox Potential, and Light , 1999, Microbiology and Molecular Biology Reviews.

[55]  P. Oeller,et al.  Arabidopsis NPH1: a protein kinase with a putative redox-sensing domain. , 1997, Science.

[56]  J. Kraut,et al.  Loop and subdomain movements in the mechanism of Escherichia coli dihydrofolate reductase: crystallographic evidence. , 1997, Biochemistry.

[57]  T. Yoshizawa Photophysiological functions of visual pigments. , 1984, Advances in biophysics.

[58]  B. Schobert,et al.  Halorhodopsin is a light-driven chloride pump. , 1982, The Journal of biological chemistry.

[59]  H. Lester,et al.  A covalently bound photoisomerizable agonist. Comparison with reversibly bound agonists at electrophorus electroplaques , 1980, The Journal of general physiology.

[60]  W. Stoeckenius,et al.  Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium. , 1975, Biophysical journal.