Redox-sensitive GFP fusions for monitoring the catalytic mechanism and inactivation of peroxiredoxins in living cells

Redox-sensitive green fluorescent protein 2 (roGFP2) is a valuable tool for redox measurements in living cells. Here, we demonstrate that roGFP2 can also be used to gain mechanistic insights into redox catalysis in vivo. In vitro enzyme properties such as the rate-limiting reduction of wild type and mutant forms of the model peroxiredoxin PfAOP are shown to correlate with the ratiometrically measured degree of oxidation of corresponding roGFP2 fusion proteins. Furthermore, stopped-flow kinetic measurements of the oxidative half-reaction of PfAOP support the interpretation that changes in the roGFP2 signal can be used to map hyperoxidation-based inactivation of the attached peroxidase. Potential future applications of our system include the improvement of redox sensors, the estimation of absolute intracellular peroxide concentrations and the in vivo assessment of protein structure-function relationships that cannot easily be addressed with recombinant enzymes, for example, the effect of post-translational protein modifications on enzyme catalysis.

[1]  I. Yamazaki,et al.  The oxidation-reduction potentials of compound I/compound II and compound II/ferric couples of horseradish peroxidases A2 and C. , 1979, The Journal of biological chemistry.

[2]  J. Imlay,et al.  Hydrogen Peroxide Fluxes and Compartmentalization inside Growing Escherichia coli , 2001, Journal of bacteriology.

[3]  I. S. Kil,et al.  Multiple Functions and Regulation of Mammalian Peroxiredoxins. , 2017, Annual review of biochemistry.

[4]  P. Karplus,et al.  Dissecting peroxiredoxin catalysis: separating binding, peroxidation, and resolution for a bacterial AhpC. , 2015, Biochemistry.

[5]  M. Schnölzer,et al.  Plasmodium falciparum antioxidant protein as a model enzyme for a special class of glutaredoxin/glutathione-dependent peroxiredoxins. , 2013, Biochimica et biophysica acta.

[6]  Andreas J Meyer,et al.  Real-time imaging of the intracellular glutathione redox potential , 2008, Nature Methods.

[7]  M. Trujillo,et al.  Pre-steady state kinetic characterization of human peroxiredoxin 5: taking advantage of Trp84 fluorescence increase upon oxidation. , 2007, Archives of biochemistry and biophysics.

[8]  M. Gutscher,et al.  Proximity-based Protein Thiol Oxidation by H2O2-scavenging Peroxidases*♦ , 2009, The Journal of Biological Chemistry.

[9]  M. Trujillo,et al.  Kinetic studies on peroxynitrite reduction by peroxiredoxins. , 2008, Methods in enzymology.

[10]  S. Rahlfs,et al.  Peroxiredoxin systems of protozoal parasites. , 2007, Sub-cellular biochemistry.

[11]  P. Karplus,et al.  Peroxiredoxin Evolution and the Regulation of Hydrogen Peroxide Signaling , 2003, Science.

[12]  H. S. Marinho,et al.  Decrease of H2O2 Plasma Membrane Permeability during Adaptation to H2O2 in Saccharomyces cerevisiae* , 2004, Journal of Biological Chemistry.

[13]  R. Aebersold,et al.  Proteomics Analysis of Cellular Response to Oxidative Stress , 2002, The Journal of Biological Chemistry.

[14]  Stefano Toppo,et al.  A comparison of thiol peroxidase mechanisms. , 2011, Antioxidants & redox signaling.

[15]  S. Lukyanov,et al.  Genetically encoded fluorescent indicator for intracellular hydrogen peroxide , 2006, Nature Methods.

[16]  Swati S. More,et al.  Tight‐binding inhibitors efficiently inactivate both reaction centers of monomeric Plasmodium falciparum glyoxalase 1 , 2012, The FEBS journal.

[17]  Knockout of the peroxiredoxin 5 homologue PFAOP does not affect the artemisinin susceptibility of Plasmodium falciparum , 2017, Scientific Reports.

[18]  P. Bork,et al.  Prokaryotic ancestry and gene fusion of a dual localized peroxiredoxin in malaria parasites , 2015, Microbial cell.

[19]  L. Netto,et al.  Reactions of yeast thioredoxin peroxidases I and II with hydrogen peroxide and peroxynitrite: rate constants by competitive kinetics. , 2007, Free radical biology & medicine.

[20]  E. Cadenas,et al.  Estimation of H2O2 gradients across biomembranes , 2000, FEBS letters.

[21]  N. Makino,et al.  A metabolic model describing the H2O2 elimination by mammalian cells including H2O2 permeation through cytoplasmic and peroxisomal membranes: comparison with experimental data. , 2004, Biochimica et biophysica acta.

[22]  Woojin Jeong,et al.  Regulation of Peroxiredoxin I Activity by Cdc2-mediated Phosphorylation* , 2002, The Journal of Biological Chemistry.

[23]  D. Dolman,et al.  A kinetic study of the reaction of horseradish peroxidase with hydrogen peroxide. , 1975, Canadian journal of biochemistry.

[24]  H. S. Marinho,et al.  H2O2 induces rapid biophysical and permeability changes in the plasma membrane of Saccharomyces cerevisiae. , 2008, Biochimica et biophysica acta.

[25]  Lee,et al.  Control of the pericentrosomal H 2 O 2 level by peroxiredoxin I is critical for mitotic progression , 2015 .

[26]  M. Trujillo,et al.  Thiol and sulfenic acid oxidation of AhpE, the one-cysteine peroxiredoxin from Mycobacterium tuberculosis: kinetics, acidity constants, and conformational dynamics. , 2009, Biochemistry.

[27]  V. Staudacher,et al.  Plasmodium falciparum antioxidant protein reveals a novel mechanism for balancing turnover and inactivation of peroxiredoxins. , 2015, Free radical biology & medicine.

[28]  T. Dick,et al.  Multiple glutathione disulfide removal pathways mediate cytosolic redox homeostasis. , 2013, Nature chemical biology.

[29]  T. Dick,et al.  Dissecting Redox Biology Using Fluorescent Protein Sensors. , 2016, Antioxidants & redox signaling.

[30]  M. Cho,et al.  Phosphorylation and concomitant structural changes in human 2‐Cys peroxiredoxin isotype I differentially regulate its peroxidase and molecular chaperone functions , 2006, FEBS letters.

[31]  J. Stone,et al.  Hydrogen peroxide: a signaling messenger. , 2006, Antioxidants & redox signaling.

[32]  P Andrew Karplus,et al.  Structure-based Insights into the Catalytic Power and Conformational Dexterity of Peroxiredoxins , 2022 .

[33]  Dae-Yeul Yu,et al.  Inactivation of Peroxiredoxin I by Phosphorylation Allows Localized H2O2 Accumulation for Cell Signaling , 2010, Cell.

[34]  B. Freeman,et al.  Peroxynitrite oxidation of sulfhydryls. The cytotoxic potential of superoxide and nitric oxide. , 1991, The Journal of biological chemistry.

[35]  C. Nickel,et al.  Thioredoxin networks in the malarial parasite Plasmodium falciparum. , 2006, Antioxidants & redox signaling.

[36]  G. Ellman,et al.  Tissue sulfhydryl groups. , 1959, Archives of biochemistry and biophysics.

[37]  T. Dick,et al.  Real-time monitoring of basal H2O2 levels with peroxiredoxin-based probes. , 2016, Nature chemical biology.

[38]  K. Becker,et al.  Biochemical characterization of Toxoplasma gondii 1-Cys peroxiredoxin 2 with mechanistic similarities to typical 2-Cys Prx. , 2005, Molecular and biochemical parasitology.

[39]  T. Dick,et al.  Measuring E(GSH) and H2O2 with roGFP2-based redox probes. , 2011, Free radical biology & medicine.