Comment on "Network Motifs: Simple Building Blocks of Complex Networks" and "Superfamilies of Evolved and Designed Networks"

Comment on "Network Motifs: Simple Building Blocks of Complex Networks" and "Superfamilies of Evolved and Designed Networks" Motifs could just be a by-product of network generation without the need for functional selection (for GRNs evolutionary mechanisms like gene duplication etc.).

[1]  S. Shen-Orr,et al.  Superfamilies of Evolved and Designed Networks , 2004, Science.

[2]  N. Gotelli,et al.  NULL MODELS IN ECOLOGY , 1996 .

[3]  S. Mangan,et al.  Structure and function of the feed-forward loop network motif , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[4]  Alan Roberts,et al.  Island-sharing by archipelago species , 2004, Oecologia.

[5]  Z N Oltvai,et al.  Evolutionary conservation of motif constituents in the yeast protein interaction network , 2003, Nature Genetics.

[6]  K. Sneppen,et al.  Specificity and Stability in Topology of Protein Networks , 2002, Science.

[7]  Daniel Simberloff,et al.  The Assembly of Species Communities: Chance or Competition? , 1979 .

[8]  S. Shen-Orr,et al.  Network motifs in the transcriptional regulation network of Escherichia coli , 2002, Nature Genetics.

[9]  P. Bourgine,et al.  Topological and causal structure of the yeast transcriptional regulatory network , 2002, Nature Genetics.

[10]  S. Shen-Orr,et al.  Network motifs: simple building blocks of complex networks. , 2002, Science.

[11]  김삼묘,et al.  “Bioinformatics” 특집을 내면서 , 2000 .

[12]  L. Stone,et al.  The checkerboard score and species distributions , 1990, Oecologia.

[13]  S. Brenner,et al.  The structure of the nervous system of the nematode Caenorhabditis elegans. , 1986, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[14]  S. Goldhor.  Ecology , 1964, The Yale Journal of Biology and Medicine.

[15]  Albert,et al.  Emergence of scaling in random networks , 1999, Science.

[16]  S. Mangan,et al.  The coherent feedforward loop serves as a sign-sensitive delay element in transcription networks. , 2003, Journal of molecular biology.

[17]  Andreas Wagner,et al.  Convergent evolution of gene circuits , 2003, Nature Genetics.

[18]  Nicola J. Rinaldi,et al.  Transcriptional Regulatory Networks in Saccharomyces cerevisiae , 2002, Science.

[19]  宁北芳,et al.  疟原虫var基因转换速率变化导致抗原变异[英]／Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A , 2005 .