Use of quantitative molecular diagnostic methods to assess the aetiology, burden, and clinical characteristics of diarrhoea in children in low-resource settings: a reanalysis of the MAL-ED cohort study

Md Iqbal Hossain | Mark A. Miller | Gagandeep Kang | Fatima Aziz | William Checkley | Imran Ahmed | Timothy L McMurry | Jean Gratz | Mami Taniuchi | Rashidul Haque | Laura Caulfield | Rebecca Dillingham | Anuradha Bose | Md Ashraful Alam | Ramya Ambikapathi | Mark A Miller | Monica McGrath | Shahida Qureshi | Stephanie A Richard | Karthikeyan Ramanujam | Asad Ali | Ali Turab | G. Kang | E. Svensen | R. Haque | W. Petri | L. Caulfield | Z. Bhutta | N. Iqbal | A. Ramachandran | R. Black | D. Operario | S. Knobler | A. Zaidi | R. Guerrant | B. McCormick | J. Platts-Mills | T. Ahmed | L. Murray-Kolb | M. I. Hossain | M. Mahfuz | Jieng-Lung Liu | E. Houpt | R. Dillingham | S. Shrestha | C. Mason | L. Bodhidatta | C. Mahopo | M. Kosek | Prakash Shrestha | A. Turab | S. Soofi | R. Nshama | I. Lima | A. Samie | A. Lima | P. Bessong | A. Ross | A. Yousafzai | Laura L. Pendergast | F. Kabir | Paphavee Lertsethtakarn | J. Gratz | M. Taniuchi | Pimmada Sakpaisal | Sasikorn Silapong | S. Qureshi | A. Kalam | Buliga Mujaga | Gwenyth O. Lee | W. Checkley | W. Pan | T. McMurry | F. Aziz | J. Muliyil | C. Patil | M. A. Alam | A. Havt | J. Leite | M. McGrath | A. Bose | S. Stroup | J. Seidman | Dinesh Mondal | William A Petri | Zulfiqar A Bhutta | C. Amour | S. Babji | M. Rasheed | Tahmeed Ahmed | James A Platts-Mills | Jie Liu | Elizabeth T Rogawski | Furqan Kabir | Paphavee Lertsethtakarn | Mery Siguas | Shaila S Khan | Ira Praharaj | Arinao Murei | Rosemary Nshama | Buliga Mujaga | Alexandre Havt | Irene A Maciel | Darwin J Operario | Suzanne E Stroup | James H Roberts | Adil Kalam | M Ohedul Islam | Pimmada Sakpaisal | Sasikorn Silapong | Pablo P Yori | Revathi Rajendiran | Blossom Benny | Benjamin J J McCormick | Jessica C Seidman | Dennis Lang | Michael Gottlieb | Richard L Guerrant | Aldo A M Lima | Jose Paulo Leite | Amidou Samie | Pascal O Bessong | Nicola Page | Ladaporn Bodhidatta | Carl Mason | Sanjaya Shrestha | Ireen Kiwelu | Estomih R Mduma | Najeeha T Iqbal | Margaret N Kosek | Eric R Houpt | Angel Mendez Acosta | Rosa Rios de Burga | Cesar Banda Chavez | Julian Torres Flores | Maribel Paredes Olotegui | Silvia Rengifo Pinedo | Dixner Rengifo Trigoso | Angel Orbe Vasquez | Didar Alam | Muneera Rasheed | Sajid Soofi | Aisha Yousafzai | Anita KM Zaidi | Binob Shrestha | Bishnu Bahadur Rayamajhi | Tor Strand | Geetha Ammu | Sudhir Babji | Ajila T George | Dinesh Hariraju | M. Steffi Jennifer | Sushil John | Shiny Kaki | Priyadarshani Karunakaran | Beena Koshy | Robin P Lazarus | Jayaprakash Muliyil | Preethi Ragasudha | Mohan Venkata Raghava | Sophy Raju | Anup Ramachandran | Rakhi Ramadas | Anuradha Rose | Reeba Roshan | Srujan L Sharma | Shanmuga Sundaram | Rahul J Thomas | William K Pan | J Daniel Carreon | Viyada Doan | Christel Hoest | Stacey Knobler | Stephanie Psaki | Zeba Rasmussen | Karen H Tountas | Erling Svensen | Caroline Amour | Eliwaza Bayyo | Regisiana Mvungi | John Pascal | Ladislaus Yarrot | Leah Barrett | Rebecca Scharf | AM Shamsir Ahmed | Umma Haque | Munirul Islam | Mustafa Mahfuz | Baitun Nahar | Fahmida Tofail | Ram Krishna Chandyo | Prakash Sunder Shrestha | Rita Shrestha | Manjeswori Ulak | Aubrey Bauck | Robert Black | Gwenyth Lee | Kerry Schulze | Samuel Scott | Laura E Murray-Kolb | A Catharine Ross | Barbara Schaefer | Suzanne Simons | Laura Pendergast | Cláudia B Abreu | Hilda Costa | Alessandra Di Moura | José Quirino Filho | Álvaro M Leite | Noélia L Lima | Ila F Lima | Bruna LL Maciel | Pedro HQS Medeiros | Milena Moraes | Francisco S Mota | Reinaldo B Oriá | Josiane Quetz | Alberto M Soares | Rosa MS Mota | Crystal L Patil | Cloupas Mahopo | Angelina Maphula | Emanuel Nyathi | D. Mondal | T. Strand | R. Scharf | A. Maphula | F. Tofail | Cláudia B. Abreu | R. Shrestha | E. Mduma | B. Koshy | M. Ulak | R. Chandyo | K. Schulze | R. Oriá | M. Raghava | S. Richard | Crystal L. Patil | Á. Leite | N. Page | E. Nyathi | B. Schaefer | R. Roshan | Z. Rasmussen | J. Quetz | S. Psaki | M. Gottlieb | A. Ahmed | S. John | I. Ahmed | P. Yori | C. Chávez | A. M. Soares | J. Q. Filho | R. Ambikapathi | B. Maciel | C. Hoest | S. Sundaram | B. Nahar | N. L. Lima | B. Benny | Ira Praharaj | Asad Ali | Binob Shrestha | A. M. Acosta | J. Flores | S. Pinedo | D. Trigoso | D. Alam | Geetha Ammu | Ajila T. George | D. Hariraju | M. S. Jennifer | S. Kaki | P. Karunakaran | Robin P. Lazarus | P. Ragasudha | S. Raju | R. Ramadas | K. Ramanujam | Anuradha Rose | S. Sharma | Rahul J. Thomas | J. Carreon | V. Doan | Dennis R. Lang | K. Tountas | E. Bayyo | R. Mvungi | J. Pascal | L. Yarrot | Umma Haque | A. Bauck | S. Simons | H. Costa | P. H. Medeiros | M. Moraes | F. S. Mota | R. Mota | L. Barrett | B. B. Rayamajhi | I. Kiwelu | A. Murei | S. Scott | Munirul Islam | A. Di Moura | P. Lertsethtakarn | M. Islam | S. S. Khan | R. Rajendiran | M. Miller | Mery Siguas | Rosa Rios de Burga | R. Lazarus | Gwenyth O. Lee | Gwenyth O. Lee | Gwenyth O. Lee | A. Ross | José Q Filho

[1]  Jie Zheng,et al.  ClinEpiDB: an open-access clinical epidemiology database resource encouraging online exploration of complex studies , 2019, Gates open research.

[2]  Mark A. Miller,et al.  Use of quantitative molecular diagnostic methods to investigate the effect of enteropathogen infections on linear growth in children in low-resource settings: longitudinal analysis of results from the MAL-ED cohort study , 2018, The Lancet. Global health.

[3]  Liu Xiaofang,et al.  Epidemiology of Sapovirus Infections in a Birth Cohort in Peru , 2017, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[4]  P. Pavlinac,et al.  Identification and management of Shigella infection in children with diarrhoea: a systematic review and meta-analysis , 2017, The Lancet. Global health.

[5]  M. Levine,et al.  Direct Detection of Shigella in Stool Specimens by Use of a Metagenomic Approach , 2017, Journal of Clinical Microbiology.

[6]  L. Moja,et al.  Guideline recommendations and antimicrobial resistance: the need for a change , 2017, BMJ Open.

[7]  G. Kang,et al.  Etiology of Severe Acute Watery Diarrhea in Children in the Global Rotavirus Surveillance Network Using Quantitative Polymerase Chain Reaction , 2017, The Journal of infectious diseases.

[8]  Mika Shigematsu,et al.  Estimates of global, regional, and national morbidity, mortality, and aetiologies of diarrhoeal diseases: a systematic analysis for the Global Burden of Disease Study 2015 , 2017, The Lancet. Infectious diseases.

[9]  L. Lamberti,et al.  Defining Pediatric Diarrhea in Low-Resource Settings , 2017, Journal of the Pediatric Infectious Diseases Society.

[10]  C. Sreeramareddy,et al.  Slow progress in diarrhea case management in low and middle income countries: evidence from cross-sectional national surveys, 1985–2012 , 2017, BMC Pediatrics.

[11]  Alexandra E T Bourgis,et al.  Defining cases of severe pediatric diarrhea for an efficacy trial of an enterotoxigenic Escherichia coli (ETEC) vaccine: Report on an international workshop, Washington DC, March 2016. , 2017, Vaccine.

[12]  G. John-Stewart,et al.  Failure of Syndrome-Based Diarrhea Management Guidelines to Detect Shigella Infections in Kenyan Children. , 2016, Journal of the Pediatric Infectious Diseases Society.

[13]  G. Kang,et al.  Use of antibiotics in children younger than two years in eight countries: a prospective cohort study , 2016, Bulletin of the World Health Organization.

[14]  Z. Bhutta,et al.  Antimicrobial resistance-a threat to neonate survival. , 2016, The Lancet. Global health.

[15]  Fatima Aziz,et al.  Use of quantitative molecular diagnostic methods to identify causes of diarrhoea in children: a reanalysis of the GEMS case-control study , 2016, The Lancet.

[16]  G. Kang,et al.  Optimization of Quantitative PCR Methods for Enteropathogen Detection , 2016, PloS one.

[17]  Jason G. Newland,et al.  Prevalence of Inappropriate Antibiotic Prescriptions Among US Ambulatory Care Visits, 2010-2011. , 2016, JAMA.

[18]  Mark A. Miller,et al.  Pathogen-specific burdens of community diarrhoea in developing countries: a multisite birth cohort study (MAL-ED). , 2015, The Lancet. Global health.

[19]  C. Gomes,et al.  Virulence factors and mechanisms of antimicrobial resistance in Shigella strains from periurban areas of Lima (Peru). , 2015, International journal of medical microbiology : IJMM.

[20]  G. Kang,et al.  Microbiologic methods utilized in the MAL-ED cohort study. , 2014, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[21]  Robert E Black,et al.  The MAL-ED study: a multinational and multidisciplinary approach to understand the relationship between enteric pathogens, malnutrition, gut physiology, physical growth, cognitive development, and immune responses in infants and children up to 2 years of age in resource-poor environments. , 2014, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[22]  Shihab U. Sobuz,et al.  Development and assessment of molecular diagnostic tests for 15 enteropathogens causing childhood diarrhoea: a multicentre study. , 2014, The Lancet. Infectious diseases.

[23]  Mustafizur Rahman,et al.  Etiological diversity of diarrhoeal disease in Bangladesh. , 2013, Journal of infection in developing countries.

[24]  S. Moore,et al.  Malnutrition as an enteric infectious disease with long-term effects on child development. , 2008, Nutrition reviews.

[25]  C. Marwick,et al.  Appropriate vs. inappropriate antimicrobial therapy. , 2008, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[26]  J. Changalucha,et al.  Antimicrobial susceptibility of Shigella flexneri and S. dysenteriae isolated from stool specimens of patients with bloody diarrhoea in Mwanza, Tanzania. , 2008, Tanzania health research bulletin.

[27]  S. Moore,et al.  Early Childhood Diarrhea Predicts Impaired School Performance , 2006, The Pediatric infectious disease journal.

[28]  E. Wald,et al.  Treatment of shigellosis with cefixime: two days vs. five days , 2000 .

[29]  D P Byar,et al.  Estimating the population attributable risk for multiple risk factors using case-control data. , 1985, American journal of epidemiology.

[30]  The Lancet Infectious Diseases Time for global political action on antimicrobial resistance. , 2016, The Lancet. Infectious diseases.

[31]  W. Youden,et al.  Index for rating diagnostic tests , 1950, Cancer.